BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg346783 Length=1287 Score E Sequences producing significant alignments: (Bits) Value AT2G02660.1 | Symbols: | F-box associated ubiquitination effec... 876 0.0 AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6... 706 0.0 AT2G16450.1 | Symbols: | F-box and associated interaction doma... 682 0.0 AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-84... 431 9e-120 AT2G16220.1 | Symbols: | F-box and associated interaction doma... 374 1e-102 AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9... 215 1e-54 AT3G56890.1 | Symbols: | F-box associated ubiquitination effec... 75.0 2e-12 AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-... 63.9 4e-09 AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-... 56.5 6e-07 AT1G30935.1 | Symbols: | pseudogene, F-box protein family, con... 54.7 2e-06 > AT2G02660.1 | Symbols: | F-box associated ubiquitination effector family protein | chr2:738504-739769 FORWARD LENGTH=1266 Length=1266 Score = 876 bits (474), Expect = 0.0 Identities = 722/839 (86%), Gaps = 27/839 (3%) Strand=Plus/Plus Query 102 GACCAGGTCCTCCGCTAAGCCGCGCCTCTTATTCGCCATCGCAGAAAACGGCGACGATAG 161 |||||||||||||||||||||| | |||||||||||||||||||| || | || || Sbjct 99 GACCAGGTCCTCCGCTAAGCCGAGTCTCTTATTCGCCATCGCAGACTAC-G-GA--AT-- 152 Query 162 CGCAGAAACTTGTGGTGTGTGGAGCTTCTTCTCATCGCCTCAGTTTGAGAATCCATATGA 221 | || || | | || | || |||||||||||||||||| |||||||||||||||| Sbjct 153 TGAAG-AAGAT-TACAGTAT-GAAATTCTTCTCATCGCCTCAGCTTGAGAATCCATATGA 209 Query 222 GAAATCGTCGTCGACTCTTGTAGCAGCTGCTGAATTTCATGTGAAGTTCTCTCCAGA-AA 280 |||||||||| | |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 210 GAAATCGTCGCCAACTCTTGTAGCAGCCGCTGAATTTCATGTGAAGTTCTCTCCAGACAA 269 Query 281 ATT--TGA-GGATCAATTATTATGGTGACATAAAATATTTTTCAATTGGCTACGCTTCTG 337 || | | |||||| ||| | ||| || ||||||||||||||||||||| |||| Sbjct 270 GTTAAT-ACCAATCAATCATTCTTACGACCCAAGATATTTTTCAATTGGCTACGCCTCTG 328 Query 338 GCTTGATCTATATCTATGGTTG-TCGATACCAAGCTAGACCTCTGATATGTAACCCCAAC 396 ||||||| ||||||||||| || ||||||| ||||||||||| ||||||||||||||| Sbjct 329 GCTTGATATATATCTATGG-TGATCGATACGTGGCTAGACCTCTAATATGTAACCCCAAC 387 Query 397 ACAGGACGGTATGCAATCTTACCTAATCGTTATACTTATAGAAAAGCGTATAGCTTTTTC 456 ||||||||||||| |||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct 388 ACAGGACGGTATGTGATCTTACCTAATCGGTATACTTACAGAAAGGCGTATAGCTTTTTC 447 Query 457 GGGTTTGACCCCATTGACAAGCAATACAAGGCCTTGTCCATC-CGTTATCCATCTGGTCC 515 ||||||||||| |||| ||||||||||||||| |||||||| | ||||||||||| ||| Sbjct 448 GGGTTTGACCCGATTGGCAAGCAATACAAGGCATTGTCCATTGC-TTATCCATCTGATCC 506 Query 516 AGGACGTAACAAAATTCTTACATTTGGAGATGGAGATCTCACGTGGAGAAAGATCAAATT 575 || ||| | ||||| |||||||| |||||||||||||| || |||||||||||||||| Sbjct 507 TGGTCGTCATAAAATACTTACATTAGGAGATGGAGATCTGACATGGAGAAAGATCAAATG 566 Query 576 TCCCTTAGGACGACCTGAAATTAAGAGTGATGGGATTTGCATCAATGGGGTTTTGTATTT 635 |||| || |||||||| |||||| |||||||||| ||||||||||||||||||||||| Sbjct 567 TCCCGTACCACGACCTGGTATTAAGGGTGATGGGATATGCATCAATGGGGTTTTGTATTT 626 Query 636 CTTAGGTGAGATAGGTGAAGG-ATCTTGTGATTATGTGATATTTTGCTTTGATGTTAGGT 694 ||||| ||||| | ||| | | | ||||||||||||| |||||||||||||||||| Sbjct 627 CTTAGCTGAGAGAAATGA-GCTAGAGTCTGATTATGTGATAGTTTGCTTTGATGTTAGGT 685 Query 695 CTGAGAAATTCACGTGTATTTATGTAG-GAAGGTTTTGTCGATTGATAAACTACAAGGGC 753 ||||||||||||| | |||| | |||| || || |||||||||||||||||||||||||| Sbjct 686 CTGAGAAATTCACATATATTGACGTAGAGA-GGATTTGTCGATTGATAAACTACAAGGGC 744 Query 754 AAATTAGCTGTGATTTATTGGGAGGATGATGTCGACATCTATGAGATCTG-TGTT-TA-- 809 ||||||||| |||||||||||||||||||||||||||| |||||||| | | | | Sbjct 745 AAATTAGCTATGATTTATTGGGAGGATGATGTCGACATTTATGAGAT-TAATCATATGGC 803 Query 810 TGGGAAGGATCTCGATGAGTATTTGGAGGAAAATCTCGACGTTGATGCCACTAACGAGTT 869 ||||||| |||| ||| |||||||||||||||||||||| |||||||||||||| ||||| Sbjct 804 TGGGAAGAATCTTGATAAGTATTTGGAGGAAAATCTCGATGTTGATGCCACTAATGAGTT 863 Query 870 GCATTTGTGGGTTCTAGAGGATGTTGAGAAAAAGAAATGGTCTAAATATGCCTACACTT 928 |||| |||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 864 GCATGTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGTCTAAATATGCCTACACTT 922 Score = 472 bits (255), Expect = 5e-132 Identities = 315/343 (92%), Gaps = 7/343 (2%) Strand=Plus/Plus Query 940 TGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCACCTTTCCATC 999 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 901 TGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCACCTTTCCATT 960 Query 1000 GCTGGAGCCACTGCTTCAGTTGAAATAGTGTTTTCCATGCGTAAGTATACATCTAAACAA 1059 ||||||||||||| ||| | ||||||||||||||| || || ||||| |||||||||||| Sbjct 961 GCTGGAGCCACTGTTTCGGGTGAAATAGTGTTTTCGATACGCAAGTACACATCTAAACAA 1020 Query 1060 CCGTTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCAA 1119 |||||||||||||| ||||||||||||||| |||||||||||||||||| |||| |||| Sbjct 1021 CCGTTTTATGTTTTCTACTTCAATCCCGAATCGAACACTCTCCAACGTGTAGAAACCCAA 1080 Query 1120 GGTTTTGGTGAAGCGTTTAAGG-A-AA-CTTGTAGCGTTCGCACCTTTGTAAACCACGTA 1176 |||||||||||||| ||||||| | || |||||||||||||||||||||||||||||||| Sbjct 1081 GGTTTTGGTGAAGCATTTAAGGCAGAAACTTGTAGCGTTCGCACCTTTGTAAACCACGTA 1140 Query 1177 GAGGATCTTGATGTTAACGATTTAAAACAACTCAAGTCAGTCCATCCTCCATTGGTGGAG 1236 ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct 1141 GAGAATCTTGATGTTAACGATTTAAAACAACTCAAGTCAGGCCATCCTCCATTGGTGCAG 1200 Query 1237 CCAGAATATTAT-GATCGATTC-GAATCAGAATCAGAATCAGA 1277 |||||| ||||| | || || | || ||||| ||||||||||| Sbjct 1201 CCAGAAAATTATTG-TCTAT-CAGACTCAGATTCAGAATCAGA 1241 > AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-6818205 REVERSE LENGTH=1414 Length=1414 Score = 706 bits (382), Expect = 0.0 Identities = 711/862 (82%), Gaps = 53/862 (6%) Strand=Plus/Plus Query 101 TGACCAGGTCCTCCGCTAAGCCGCGCCTCTTATTCGCCATCGCAGA-AAACGGCGACGAT 159 |||||||||||||| ||||||||||||||||||||||||| ||||| ||| | | |||| Sbjct 273 TGACCAGGTCCTCCACTAAGCCGCGCCTCTTATTCGCCATGGCAGAGAAA-GTCAACGA- 330 Query 160 AGCGCAGAAACTTGTGGTGTGTGGAGCTTCTTCTC-ATCGCCTCAGTTTGAGAATCCATA 218 || | | |||| | |||||||||| |||||||| | |||| ||| ||||||||||||| Sbjct 331 AGAG-AAAAAC---T-GTGTGTGGAGGTTCTTCTCGA-CGCCACAGCTTGAGAATCCATA 384 Query 219 TGAGAAATCGTCGTCGACTCTTGTAGCAGCTGCTGAATTTCATGTGAAGTTCTCTCCAGA 278 ||||||||| || ||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 385 TGAGAAATCCTCATCGACTCTTGTAGCAGCCGCTGAATTTCATGTTAAGTTCTCTCCAGA 444 Query 279 -AA-ATTTGAGGATCAATTATTATGGTGACATAAAATATTTTTCAATTGGCTACGCTTCT 336 || | | | ||| | ||| | |||| ||||||||||||||||||||||||| || Sbjct 445 CAAGCTAT-A-TATCTGTCATTGTTATGACCTAAAATATTTTTCAATTGGCTACGCCTCG 502 Query 337 GGCTTGATCTATATCTATGGTTG-TCGATACCAAGCTAGACCTCTGATATGTAACCCCAA 395 || ||||||||| | ||||| || |||| | | |||| |||||| |||||||||||| | Sbjct 503 GGGTTGATCTATTTATATGG-TGATCGAGGCGAGGCTACACCTCTAATATGTAACCCC-A 560 Query 396 C-ACAGGACGGTATGCAATCTTACCTAATCGTTATACTTATAGAAAAGCGTATAGCTTTT 454 | |||||||||||||| |||||||||||||| |||||||| ||||| ||||||||||||| Sbjct 561 CTACAGGACGGTATGCCATCTTACCTAATCGGTATACTTACAGAAAGGCGTATAGCTTTT 620 Query 455 TCGGGTTTGACCCCATTGACAAGCAATACAAGGCCTTGTCCATCCGTTATCCATCTGGTC 514 |||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||| Sbjct 621 TCGGATTTGACCCGATTGACAAGCAATACAAGGCATTGTCCATATTTTATCCATCTGGTC 680 Query 515 CAGGACGTAACAAAATTCTTACATTTGGAGATGGAGATCTCACGTGGAGAAAGATCAAAT 574 | || | || ||||||||||||||||| | |||| || | | |||||||||||| |||| Sbjct 681 CTGGTCATAGTAAAATTCTTACATTTGGGGCTGGACATATGAAGTGGAGAAAGAT-AAAT 739 Query 575 T-TCCCTTA-G----GA-CGACCTGAAATTAAGAGTGATGGGATTTGCATCAATGGGGTT 627 | ||||||| | || ||| ||| ||||||||||| ||||| ||||||||||| ||| Sbjct 740 TGTCCCTTACGATATGATAGACATGATATTAAGAGTGAAGGGATATGCATCAATGGAGTT 799 Query 628 TTGTATTTCTTAGGT-G-A-----GATAG-GTGAAGGA---TC-T----T-G----TGAT 666 ||||||| ||||||| | | ||| | || ||||| || | | | |||| Sbjct 800 TTGTATTACTTAGGTAGCACGTCGGATTGTGTTAAGGATGGTCATGGCATAGTATCTGAT 859 Query 667 TATGTGATATTTTGCTTTGATGTTAGGTCTGAGAAATTCACGTGTATTTATGTAGGAAGG 726 ||||||||| ||||||||||| ||||||||||||||||||||| |||| | |||| |||| Sbjct 860 TATGTGATAGTTTGCTTTGATATTAGGTCTGAGAAATTCACGTTTATTGACGTAGAAAGG 919 Query 727 TTTTGTCGATTGATAAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATGATGTC 786 |||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 920 TTTTGTCGATTGATCAACTATAAGGGAAAATTAGCTGTGATTTATTGGGAGGATGATGTC 979 Query 787 GACATCTATGAGATCTGTGTTTATGGGAAGGATCTCGATGAGTATTTGGAGGAAAATCTC 846 ||||| ||| || | | | || || | | || |||| || ||| ||||| | ||| | Sbjct 980 GACATTTATAAGCT-T-TATT-ATTCG--G-ATGTCGACGAATATGTGGAGTATAATATT 1033 Query 847 GACGTTGATGCCACTAACGAGTTGCATTTGTGGGTTCTAGAGGATGTTGAGAAAAAGAAA 906 ||| ||||| || ||| ||||||| | |||||||||||||||||||| ||||| || || Sbjct 1034 AACGATGATGACATTAATGAGTTGCGTGTGTGGGTTCTAGAGGATGTTAAGAAACAGCAA 1093 Query 907 TGGTCTAAATATGCCTACACTT 928 ||||| |||||||||||||||| Sbjct 1094 TGGTCGAAATATGCCTACACTT 1115 Score = 403 bits (218), Expect = 2e-111 Identities = 272/298 (91%), Gaps = 4/298 (1%) Strand=Plus/Plus Query 940 TGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCACCTTTCCATC 999 ||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct 1094 TGGTCGAAATATGCCTACACTTGGACCGATGATAGATTCTTCCGTCGTCGTGTTTCCATC 1153 Query 1000 GCTGGAGCCACTGCTTCAGTTGAAATAGTGTTTTCCATGCGT-AAGTATACATCTAAACA 1058 ||||||| |||||||| | ||||||||||||||| |||| | || |||||| |||| || Sbjct 1154 GCTGGAGGGACTGCTTCGGGTGAAATAGTGTTTTCGATGC-TCAAATATACACCTAAGCA 1212 Query 1059 ACCGTTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCA 1118 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1213 ACCGTTTTATGTTTTCTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCA 1272 Query 1119 AGGTTTTGGTGAAGCGTTTAAGGAAACTTGTAGCGTTCGCACCTTTGTAAACCACGTAGA 1178 |||||||||||||| ||| ||| |||||||||| ||| |||||||||||||||||||||| Sbjct 1273 AGGTTTTGGTGAAGTGTTAAAGAAAACTTGTAGAGTTTGCACCTTTGTAAACCACGTAGA 1332 Query 1179 GGATCTTGATGTTAACGA-TTTAAAACAACTCAAGTCAGTCCATCCTCCATTGGTGGA 1235 ||||||| ||||| |||| |||||| |||||||||||||||||||| ||||||||||| Sbjct 1333 GGATCTTAATGTTCACGACTTTAAA-CAACTCAAGTCAGTCCATCCCCCATTGGTGGA 1389 > AT2G16450.1 | Symbols: | F-box and associated interaction domains-containing protein | chr2:7131520-7132803 REVERSE LENGTH=1284 Length=1284 Score = 682 bits (369), Expect = 0.0 Identities = 712/868 (82%), Gaps = 62/868 (7%) Strand=Plus/Plus Query 101 TGACCAGGTCCTCCG-CTAAGCCGCGCCTCTTATTCGCCATCGCAGA-AAACGGCGACGA 158 |||||||||||| || ||||||||||||||||||||||||||||||| ||| ||| || | Sbjct 140 TGACCAGGTCCT-CGACTAAGCCGCGCCTCTTATTCGCCATCGCAGAGAAA-GGCAAC-A 196 Query 159 TAGCGCAGAAACTTGTGGTGTGTGGAGCTTCTTCTCATCGCCTCAGTTTGAGAATCCATA 218 | | ||||| | |||||||||| |||||||| ||||| ||| ||||||||||||| Sbjct 197 -A-AG-AGAAA-GACT-GTGTGTGGAGGTTCTTCTCGTCGCCACAGCTTGAGAATCCATA 251 Query 219 TGAGAAATCGTCGTCGACTCTTGTAGCAGCTGCTGAATTTCATGTGA-AGTTCTCTCCAG 277 ||||||||| || ||||||||||||||| | |||||||||||||||| | |||||||||| Sbjct 252 TGAGAAATCCTCATCGACTCTTGTAGCAACCGCTGAATTTCATGTGAGA-TTCTCTCCAG 310 Query 278 AAAATTTGAG-GATCAATTATTATGGTGACATAAAATATTTTTCAATTGGCTACGC-TTC 335 | ||| | | |||| | ||||| |||| ||||||||||||||||||| || || || Sbjct 311 ACAATCT-ACTGATCTGTCATTATTATGACCTAAAATATTTTTCAATTGGTTATGCCTT- 368 Query 336 TGGCTTGATCTATATCTATGGTTGTCGATACCAAGCTAGACCTCTGATATGTAACCCCAA 395 |||||||||||||||||||||| |||| || ||||||||||| ||||||||||||| Sbjct 369 TGGCTTGATCTATATCTATGGTAATCGAGGCCGGGCTAGACCTCTAATATGTAACCCCA- 427 Query 396 C-ACAGGACGGTATGCAATCTTACCTAATCGTTATACTTATAGAAAAGCGTATAGCTTTT 454 | |||||||||||||| |||||||||||||| |||||||| ||||| |||| |||||||| Sbjct 428 CTACAGGACGGTATGCCATCTTACCTAATCGGTATACTTACAGAAAGGCGTTTAGCTTTT 487 Query 455 TCGGGTTTGACCCCATTGACAAGCAATACAAGGCCTTGTCCATCCGTT-ATCCATCTGGT 513 ||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||||||| Sbjct 488 TCGGGTTTGACCCAATTGACAAGCAATACAAGGCATTGTCCATG-GTTTATCCATCTGGT 546 Query 514 CCAGGACGTAACAAAATTCTTACATTTGGAGATGGAGATCTCACGTGGAGAAAGATCAAA 573 || || | || | | || |||||||||||| ||||||||| | |||||||| ||| ||| Sbjct 547 CCTGGTCATAGTAGAGTTATTACATTTGGAGCTGGAGATCTGAAGTGGAGAAGGATAAAA 606 Query 574 T-TTCCCTTAGGACGACCTGAAATTAAGAGTGATGGGATTTGCATCAATGGGGTTTTGTA 632 | ||| || | |||| ||| ||||||||||| ||| | || ||||||||||||||||| Sbjct 607 TGTTCA-TT-G--CGACATGATATTAAGAGTGAAGGGGTATGTATCAATGGGGTTTTGTA 662 Query 633 TTTCTTAGGTGAGA--T---A--GG--T-G----AA-GG-A-TCT--T---GT--GATTA 668 || ||||||||| | | | || | | || || | || | || | ||| Sbjct 663 TTACTTAGGTGACACGTCGGATTGGAGTCGCGTTAATGGTAATCACGTAACGTCTGGTTA 722 Query 669 TGTGATATTTTGCTTTGATGTTAGGTCTGAGAAATTCACGTGTATTTATGTAGGAAGGTT 728 | ||||| |||||||||||||||||||||| |||||||| | |||| | ||| |||||| Sbjct 723 TATGATAGTTTGCTTTGATGTTAGGTCTGAAAAATTCACCTTTATTGACGTAAAAAGGTT 782 Query 729 TTGTCGATTGATAAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATGATGTCGA 788 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 783 TTGTCGATTGATAAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATGATGTCGA 842 Query 789 CAT-CTATGAGATCTGTGTTT-AT---GGG-A-AGGATCTCGATGAGTATTTGGAGGAA- 840 ||| | | ||| | | | || | ||| | || || |||| || ||| ||||| || Sbjct 843 CATTCAA-GAGCT-T-TATTACAAAAAGGGTATAG-ATGTCGAGGAATATGTGGAG-AAT 897 Query 841 AATCTCGACGTTGATGCCACTAACGAGTTGCATTTGTGGGTTCTAGAGGATGTTGAGAAA 900 ||| || ||| |||||||||||| |||||| | ||||| |||||| ||||||||||||| Sbjct 898 AATGTCAACGCTGATGCCACTAATGAGTTGTGTGTGTGGATTCTAGCGGATGTTGAGAAA 957 Query 901 AAGAAATGGTCTAAATATGCCTACACTT 928 || ||||||| ||| |||||||||||| Sbjct 958 CAGGAATGGTCGAAACATGCCTACACTT 985 Score = 388 bits (210), Expect = 5e-107 Identities = 283/317 (89%), Gaps = 10/317 (3%) Strand=Plus/Plus Query 940 TGGTCTAAATATGCCTACACTTGGACCGATGATACA-TTCTTCCGTCGTCACCTTTCCAT 998 ||||| ||| |||||||||||||||||||||| | | |||||||||||| | ||||| Sbjct 964 TGGTCGAAACATGCCTACACTTGGACCGATGA-AAAGTTCTTCCGTCGTTTGGTATCCAT 1022 Query 999 CGCTGGAGCCACTGCTTCAGTTGAAATAGTGTTTTCCATGCGTAAGTATACAT-CTAAAC 1057 |||||||| |||||||| | ||||||||||||||| ||||| |||| || || |||||| Sbjct 1023 CGCTGGAGTGACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTGTA-ATCCTAAAC 1081 Query 1058 AACCGTTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCC 1117 ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 1082 AACCGTTTTATGTGTTTTACTTCAATCCCGAAAGGAACAGTCTCCAACGTGTTGAAATTC 1141 Query 1118 AAGGTTTTGGTGAAG-CGTTTAAGGAAA-CTTGTAG-CGTTCGCACCTTTGTAAACCACG 1174 ||||||||||||||| || || | |||| ||||| | |||| |||||||||||||||||| Sbjct 1142 AAGGTTTTGGTGAAGCCG-TT-ACGAAATCTTGT-GACGTTTGCACCTTTGTAAACCACG 1198 Query 1175 TAGAGGATCTTGATGTTAACGATTTAAAACAACTCAAGTCAGTCCATCCTCCATTGGTGG 1234 |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 1199 TAGAGGATCTCAATGTTTACGATTTAAAACAACTCAAGTCAGTCCATCCTCCATTGGTCG 1258 Query 1235 AGCCAGAATATTATGAT 1251 ||||||||||||||||| Sbjct 1259 AGCCAGAATATTATGAT 1275 > AT2G02890.1 | Symbols: | F-box family protein | chr2:843913-846616 REVERSE LENGTH=1596 Length=1596 Score = 431 bits (233), Expect = 9e-120 Identities = 401/480 (84%), Gaps = 20/480 (4%) Strand=Plus/Plus Query 102 GACCAGGTCCTCCGCTAAGCCGCGCCTCTTATTCGCCATCGCAGAAAACGGCGACGATAG 161 |||||||||||||||||||||| | |||||||||||||||||||| || | || || Sbjct 561 GACCAGGTCCTCCGCTAAGCCGAGTCTCTTATTCGCCATCGCAGACTAC-G-GA--AT-- 614 Query 162 CGCAGAAACTTGTGGTGTGTGGAGCTTCTTCTCATCGCCTCAGTTTGAGAATCCATATGA 221 | || || | | || | || |||||||||||||||||| |||||||| ||||||| Sbjct 615 TGAAG-AAGAT-TACAGTAT-GAAATTCTTCTCATCGCCTCAGCTTGAGAATACATATGA 671 Query 222 GAAATCGTCGTCGACTCTTGTAGCAGCTGCTGAATTTCATGTGAAGTTCTCTCCAGA-AA 280 |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 672 GAAAACGTCGTCAACTCTTGTAGCAGCCGCTGAATTTCATGTGAAGTTCTCTCCAGACAA 731 Query 281 AT--TTGA-GGATCAATTAT-TATGGTGACATAAAATATTTTTCAATTGGCTACGCTTCT 336 | | | |||| | | | | || ||| || |||| |||||||||||||||| ||| Sbjct 732 GTCAAT-ACCGATCTA-TCTGTCTGAAGACCCAAGATATGTTTCAATTGGCTACGCCTCT 789 Query 337 GGCTTGATCTATATCTATGGTTGTCGATACCAAGCTAGACCTCTGATATGTAACCCCAAC 396 ||||||||||||| |||| || |||||||| | ||||||||| ||||||||||||||| Sbjct 790 GGCTTGATCTATAACTATTGTGGTCGATACGTGGGTAGACCTCTAATATGTAACCCCAAC 849 Query 397 ACAGGACGGTATGCAATCTTACC-TAATCGTTATACTTATAGAAAAGCGTATAGCTTTTT 455 |||||||||||||| |||||||| || |||||||||||||||||| |||||||| ||||| Sbjct 850 ACAGGACGGTATGCGATCTTACCATA-TCGTTATACTTATAGAAAGGCGTATAGTTTTTT 908 Query 456 CGGGTTTGACCCCATTGACAAGCAATACAAGGCCTTGTCCAT-CCGTTATCCATCTGGTC 514 |||||||||||| ||||||||||||||||||||||||||| | || |||| | ||||| Sbjct 909 CGGGTTTGACCCGATTGACAAGCAATACAAGGCCTTGTCCCTTCC-TTATGTAGATGGTC 967 Query 515 CAGGACGTAACAAAATTCTTACATTTGGAGATGGAGATCTCACGTGGAGAAAGATCAAAT 574 | || |||| ||| ||||||||||||||| ||||||||| || |||||||| || |||| Sbjct 968 CTGGTCGTAGTAAAGTTCTTACATTTGGAGCTGGAGATCTGACATGGAGAAATATTAAAT 1027 Score = 420 bits (227), Expect = 2e-116 Identities = 258/273 (95%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 940 TGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCGTCGTCACCTTTCCATC 999 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1303 TGGTCTAAATATGCCTACACTTGGACCGATGATACATTCTTCCATCGTCACCTTTCCATT 1362 Query 1000 GCTGGAGCCACTGCTTCAGTTGAAATAGTGTTTTCCATGCGTAAGTATACATCTAAACAA 1059 ||||||||||||||||| | ||||||||||||||| ||||| ||||| |||||||||||| Sbjct 1363 GCTGGAGCCACTGCTTCGGGTGAAATAGTGTTTTCGATGCGCAAGTACACATCTAAACAA 1422 Query 1060 CCGTTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCAA 1119 || ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1423 CCATTTTATGTTTTCTACTTCAATCCCGAAAGGAATACTCTCCAACGTGTTGAAATCCAA 1482 Query 1120 GGTTTTGGTGAAGCGTTTAAGGA-AACTTGTAGCGTTCGCACCTTTGTAAACCACGTAGA 1178 ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||| |||| Sbjct 1483 GGTTTTGGTGAAGCGTTTA-GGACAACTTGTAGTGTTCGCACCTTTGTAAACCACATAGA 1541 Query 1179 GGATCTTGATGTTAACGATTTAAAACAACTCAA 1211 |||||||||||||||||||||| |||||||||| Sbjct 1542 GGATCTTGATGTTAACGATTTAGAACAACTCAA 1574 > AT2G16220.1 | Symbols: | F-box and associated interaction domains-containing protein | chr2:7030155-7031378 REVERSE LENGTH=1224 Length=1224 Score = 374 bits (202), Expect = 1e-102 Identities = 467/589 (79%), Gaps = 42/589 (7%) Strand=Plus/Plus Query 220 GAGAAATCGTCGTCGACTCTTGTAGCAGCTGCTGAATTTCATGTGAAGTTCTCTCCAGAA 279 ||||| ||||||||||||||||||||| | |||||||||||| ||||||| |||||| || Sbjct 223 GAGAAGTCGTCGTCGACTCTTGTAGCAACCGCTGAATTTCATATGAAGTTATCTCCA-AA 281 Query 280 -AATTTGA-GGATCAATTATTATGGTGA-CATAAAATATTTTTCAATTGGCTACGCTTCT 336 ||| | | | ||| || || || | | | || ||||||||||||||| ||||| ||| Sbjct 282 CAATCT-ACGAATCTATCATGATAAT-ACCCCAAGATATTTTTCAATTGGTTACGCCTCT 339 Query 337 GGCTTGATCTATATCTATGGTTG-TCGATACCAAGCTAGACCTCTGATATGTAACCCCAA 395 |||||||||||| | ||||| || ||||||| | |||| ||||||||||||||||||||| Sbjct 340 GGCTTGATCTATTTATATGG-TGATCGATACGAGGCTACACCTCTGATATGTAACCCCAA 398 Query 396 CACAGGACGGTATGCAATCTTACCTAA-TCGTTATACTTATAGAAAAGCGTATAGCTTTT 454 ||||||| ||||| | ||||||||||| | | |||||||||||||| |||| |||||||| Sbjct 399 CACAGGAAGGTATACGATCTTACCTAAGT-GCTATACTTATAGAAAGGCGTTTAGCTTTT 457 Query 455 TCGGGTTTGACCCCATTGACAAGCAATACAAGGCCTTGTCCATCCGT-TATCCATCTGGT 513 ||||||||||||| ||||||||||| |||||||| |||||||| | |||||||||||| Sbjct 458 TCGGGTTTGACCCAATTGACAAGCAGTACAAGGCATTGTCCATGA-TCTATCCATCTGGT 516 Query 514 CCAGGACGTAACAAAATTCTTACATTTGGAGATGGAGATCTCACGTGGAGAAAGATCAAA 573 || || | | ||||||||||| ||||||||||| ||| | | |||| |||||| ||| Sbjct 517 CCTGGTCACAGTAAAATTCTTACTTTTGGAGATGGGGATATGAATTGGAAAAAGATAAAA 576 Query 574 TTTCCCTTAGGACGACCTGAAATTAAGAGTGATGGGATTTGCATCAATGGGGTTTTGTAT 633 | || | | || || ||| ||| | ||| | ||||| ||||||||||| ||||||||| Sbjct 577 TATCG-T--GTACTACATGATATTTACAGTCAAGGGATATGCATCAATGGTGTTTTGTAT 633 Query 634 TTCTTAGGTGAGA--T-AGGT-G--A-AG-GATCTTG-TG-A---T-T---A-TGTGATA 675 | ||||||||| | | || | | | | |||| || || | | | | |||| || Sbjct 634 TACTTAGGTGACACGTCAGATTGGGATAATGATCATGATGTAACGTCTGGTAATGTGTTA 693 Query 676 TTTTGCTTTGATGTTAGG-TCTGAGAAATT-CACGTGTATTTA-TGTAGGAAGGTTTTGT 732 ||||||||||| ||| | || || || || ||| | |||| | ||| || || || Sbjct 694 GTTTGCTTTGAT-TTAAGATCCGA-AAGTTTCACCTTTATTGGCT-TAG-AATGTG--GT 747 Query 733 CGATTGATAAACTACAAGGGCAAATTAGCTGTGATTTATTGGGAGGATG 781 | |||||||||||| ||||||||||||||||| |||| |||||| |||| Sbjct 748 CAATTGATAAACTATAAGGGCAAATTAGCTGTAATTTTTTGGGATGATG 796 > AT2G23160.1 | Symbols: | F-box family protein | chr2:9862470-9863744 FORWARD LENGTH=1275 Length=1275 Score = 215 bits (116), Expect = 1e-54 Identities = 250/311 (80%), Gaps = 23/311 (7%) Strand=Plus/Plus Query 946 AAATATGCCTACACTTGGACCGATGATACATTC-TTC--CGTCGTCACCTTTCCATCGCT 1002 |||||||||||||||||||||||||||| |||| ||| |||||| | ||||| | ||| Sbjct 925 AAATATGCCTACACTTGGACCGATGATATATTCTTTCGTCGTCGTGAGGTTTCCGTTGCT 984 Query 1003 -GGA-G-CCACTGCTTCAGTTGAAATAGTGTTTTCCATGCGTAAGTATACAT-CTAAACA 1058 | | | |||||| | ||| ||||| ||||| ||| || ||||||| | || ||| Sbjct 985 CCAACGACTGCTGCTTGGGGTGACATAGTCTTTTCGATGTGTGAGTATAC-TCCTGGACA 1043 Query 1059 ACCGTTTTATGTTTTTTACTTCAATCCCGAAAGGAACACTCTCCAACGTGTTGAAATCCA 1118 ||| ||||||||||| |||||||||||||||| || |||||||||||||||||||||||| Sbjct 1044 ACCATTTTATGTTTTCTACTTCAATCCCGAAAAGAGCACTCTCCAACGTGTTGAAATCCA 1103 Query 1119 AGGTTTTGGTGAAG-CGTTTAAGGAAACTTGTAGCGTTCGCACCTTTGTAAACCACGTAG 1177 |||||||||||||| ||||| | | |||||| |||||||||| || |||||| Sbjct 1104 AGGTTTTGGTGAAGGCGTTT--G-----T---AGCGTTTACACCTTTGTAGACGACGTAG 1153 Query 1178 AGGATCTTGATGTTAACGATTTAAAACA-ACTCAAGTCAGTCCA-TCCTCCATTGGTGGA 1235 | |||||| ||||||| ||||||||| | ||||||| || |||| | ||||||| | | | Sbjct 1154 AAGATCTTAATGTTAAGGATTTAAAA-ATACTCAAGCCA-TCCAATGCTCCATTTGAGAA 1211 Query 1236 GCCAGAATATT 1246 | ||||| ||| Sbjct 1212 GACAGAAGATT 1222 > AT3G56890.1 | Symbols: | F-box associated ubiquitination effector family protein | chr3:21062990-21063717 REVERSE LENGTH=660 Length=660 Score = 75.0 bits (40), Expect = 2e-12 Identities = 57/65 (88%), Gaps = 2/65 (3%) Strand=Plus/Plus Query 865 GAGTTGCATTTGTGGGTTCTAGAGGATGTTGAGAAAAAGAAATGG-TCTAAATATGCCTA 923 |||||| |||||||||||||||||||||||||||| || ||||| || || |||| ||| Sbjct 262 GAGTTGTGTTTGTGGGTTCTAGAGGATGTTGAGAAACAGGAATGGGTC-AAGTATGTCTA 320 Query 924 CACTT 928 ||||| Sbjct 321 CACTT 325 > AT1G47300.1 | Symbols: | F-box family protein | chr1:17339561-17340972 REVERSE LENGTH=921 Length=921 Score = 63.9 bits (34), Expect = 4e-09 Identities = 38/40 (95%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 1092 GAACACTCTCCAACGTGTTGAAATCCAAGGTTTTGGTGAA 1131 ||||||| |||||||||||||||||||||||||||| ||| Sbjct 585 GAACACTATCCAACGTGTTGAAATCCAAGGTTTTGGAGAA 624 > AT1G31080.1 | Symbols: | F-box family protein | chr1:11091832-11092899 FORWARD LENGTH=1068 Length=1068 Score = 56.5 bits (30), Expect = 6e-07 Identities = 37/40 (93%), Gaps = 2/40 (5%) Strand=Plus/Plus Query 678 TTGCTTTGATGTTAGGTCTGAGAAATTCACGTGTATTTAT 717 ||||||||||||||||||||||||||||| || | ||||| Sbjct 462 TTGCTTTGATGTTAGGTCTGAGAAATTCAAGT-T-TTTAT 499 > AT1G30935.1 | Symbols: | pseudogene, F-box protein family, contains F-box domain Pfam:PF00646 | chr1:11017436-11018990 REVERSE LENGTH=1555 Length=1555 Score = 54.7 bits (29), Expect = 2e-06 Identities = 29/29 (100%), Gaps = 0/29 (0%) Strand=Plus/Plus Query 678 TTGCTTTGATGTTAGGTCTGAGAAATTCA 706 ||||||||||||||||||||||||||||| Sbjct 684 TTGCTTTGATGTTAGGTCTGAGAAATTCA 712 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63302887245 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5