BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg346891
Length=1101
Score E
Sequences producing significant alignments: (Bits) Value
AT2G03980.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 1496 0.0
AT2G04020.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 652 0.0
> AT2G03980.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr2:1259199-1262552 FORWARD LENGTH=1420
Length=1420
Score = 1496 bits (810), Expect = 0.0
Identities = 1003/1096 (92%), Gaps = 14/1096 (1%)
Strand=Plus/Plus
Query 1 ATGGATTTGCATTCTTTTCTAAACTCATACTTTCTTTTGGTCTTCCTCTGTCTTCTTAAT 60
|||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||
Sbjct 173 ATGGATTTGCATTCTTGTCTAAACTCATACTTTCTTTTGCTCCTCCTCTGTCTTCTTAAT 232
Query 61 ATTTCCACCATTAACTCAGCGAAGCCATTAAAACAAGAAACGGTGCTTTTTGGTGGGAAG 120
||| |||||||||||||| ||||||||||| |||||||||| ||||||||||| || ||
Sbjct 233 ATTACCACCATTAACTCAACGAAGCCATTAGAACAAGAAACAGTGCTTTTTGGCGGCAAC 292
Query 121 TTTCAGGCTTTGTATGTTATTGGAGATTCATTGGTTGATTCAGGAAACAATAATTATCTT 180
|||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 293 TTTCCGGCTTTTTATGTTATTGGAGATTCATTGGTTGATTCAGGAAACAATAATCATCTT 352
Query 181 GCGACAAAGGTCAAATCGAATTTTACACCTTATGGTTCTGACTTTGAAGGTGGTAAAGCT 240
| || | |||||||||||||||| ||||||||||||| |||||||||||||| |||||
Sbjct 353 ACAACGATGGTCAAATCGAATTTTCCACCTTATGGTTCGGACTTTGAAGGTGGCAAAGCC 412
Query 241 ACCGGACGTTTTAGCAATGGCAAAACAATTGCTGATTATATTGCTATCTATTATGGTCTT 300
||||| ||||| |||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 413 ACCGGCCGTTTCAGCAATGGCAAAACAATTGCTGATTACATTGCTATCTACTATGGTCTT 472
Query 301 CCTTTGGTTCCTGCTTACATGGGATTATCTGAAGAAGAAAAGAATAATAT-TACAACTGG 359
||||||||||||||||| ||||||||||| ||||||||||||||| ||| | |||||||
Sbjct 473 CCTTTGGTTCCTGCTTATTTGGGATTATCTCAAGAAGAAAAGAATAGTATCT-CAACTGG 531
Query 360 TTTTAACTATGCTTCTGCTAGTTGTGGGATTCTTCCTGACACAGGAAAGTTAATGGGAAA 419
| ||||||||||||||||| | ||||||||||||||| | ||||||| | ||| ||||
Sbjct 532 TATTAACTATGCTTCTGCTGGCTGTGGGATTCTTCCTCAGACAGGAAGGCAAATAGGAAC 591
Query 420 ATGTCTCTCGTTAAGTGTCCAAGTCGATATGTTCAAGGAGACCATCGCAAAAAATCTGAA 479
|||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||
Sbjct 592 ATGTCTCTCGTTAAGTGTCCAAGTCGATATGTTCCAGGAGACCATCACAAACAATCTGAA 651
Query 480 GAAGAACTTCAAGAAGTCAGAGCTCCGTAAACACTTGGCTGAATCGTTGTTTATGACCGC 539
|||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||
Sbjct 652 GAAGAACTTCAAGAAGTCCGAGCTCCGTGAACACTTGGCTGAATCGTTGTTTATGATCGC 711
Query 540 AATTGGGGTTAACGATTACGCGTTCTT-TTTCAAT-ATGACAACCGATGCAAATGAGTTT 597
|||||||||||||| ||| | ||||| ||| ||| | ||||||||||| |||||||||
Sbjct 712 CATTGGGGTTAACGACTACACATTCTTATTT-AATGA-AACAACCGATGCGAATGAGTTT 769
Query 598 GCAAACAAGCTTCTTCATGATTACTTGATACAAATAGAGAGATTGCACAAGTTAGGAGCA 657
||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||
Sbjct 770 GCAAACAAGCTTCTTCATGATTACTTGCTTCAAATAGAAAGATTGCACAAGTTAGGAGCA 829
Query 658 AGGAAGTTCTTCATCAACAACATTAAACCATTAGGATGTTACCCAAATATGGTAGCTAAG 717
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 830 AGGAAGTTCTTCATCAACAACATTAAACCATTAGGATGTTACCCAAATGTTGTAGCTAAG 889
Query 718 ACCGTGCCACGCGGAAGCTGCAACGATCCTTTGAACCTTGCGATCAGCATTTTCAACACT 777
||||||||||| ||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct 890 ACCGTGCCACGTGGAAGCTGCAACGATGCTTTGAACTTTGCGGTCAGCATTTTCAACACT 949
Query 778 AAGCTTAGAAAAAG-CTTGTCTCATATGACGCAAAAATTCAT-AAAGACTTCCTTTTTAT 835
|||||||||||||| || ||||| |||||||||||||||||| ||| || ||||||||||
Sbjct 950 AAGCTTAGAAAAAGTCT-GTCTCGTATGACGCAAAAATTCATCAAA-ACGTCCTTTTTAT 1007
Query 836 ACTCCGATTACTTCAACTACATGTTGGGACTAAGAGGACCATCAAGCAATCAAGTTGGTT 895
|||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1008 ACTCGGATTACTACAACTACATGTTGGGACTAAGAGGACCTTCAAGCAATCAAGTTGGTT 1067
Query 896 CCAGTCTACTGAACGTGACTAGCCCGTGTTGTCCTGACGTTTATGATGGAGGTTTAATC- 954
| |||||| |||||||||| ||||| ||||||||| ||||||||||||||||| |||
Sbjct 1068 CGAGTCTATTGAACGTGACAAGCCCATGTTGTCCTAACGTTTATGATGGAGGTC-AATTG 1126
Query 955 ACAAGCTGCACGGCC-GGTTCGATCGCGTGTAAGGCACCCGATACTCATATTTTCTTTGA 1013
||||| |||| | || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1127 ACAAGTTGCAAG-CCTGGTTCGATCGCGTGTAAGGCACCCGATACTCATATTTTCTTTGA 1185
Query 1014 TCCGTTTCATCCTACTCAATTGGCGAATTATATGTACGCGATTGCATGTTTCCACGAGAG 1073
|||||||||||| ||||||||||||||||| ||||| |||||||| ||||||||||||||
Sbjct 1186 TCCGTTTCATCCGACTCAATTGGCGAATTACATGTATGCGATTGCGTGTTTCCACGAGAG 1245
Query 1074 GAGTATTTGCCATGTG 1089
|||||||||||||||
Sbjct 1246 AAGTATTTGCCATGTG 1261
> AT2G04020.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr2:1274427-1275524 FORWARD LENGTH=786
Length=786
Score = 652 bits (353), Expect = 0.0
Identities = 656/800 (82%), Gaps = 29/800 (4%)
Strand=Plus/Plus
Query 1 ATGGATTTGCATTCTTTTCTAAACTCATACTTTCTTTTGGTCTTCCTCTGTCTTCTTAAT 60
|||| ||||| ||| | |||| | |||||| |||||||| || |||||| | |||| |||
Sbjct 1 ATGGGTTTGCCTTCGTCTCTAGAGTCATACCTTCTTTTGATCCTCCTCTCTTTTCTCAAT 60
Query 61 ATTTCCACCATTA-ACTCAGCGAAGCCATTAAAACAAGAAACGGTGCTTTTTGGTGGGAA 119
| ||||| | || ||||| ||||||||| |||| ||||| | ||||||||||| |||||
Sbjct 61 GTCTCCACGA-TATACTCATCGAAGCCATCAAAAGAAGAAGCCGTGCTTTTTGGCGGGAA 119
Query 120 GTTTCAGGCTTTGTATGTTATTGGAGATTCATTGGTTGATTCAGGAAACAATAATTATCT 179
|||| |||||| |||||||||||||||||| |||||||| ||||||||||||| ||||
Sbjct 120 CTTTCCGGCTTTTTATGTTATTGGAGATTCACTGGTTGATCCAGGAAACAATAACCATCT 179
Query 180 TGCGACAAAGGTCAAATCGAATTTTACACCTTATGGTTCTGACTTTGAAGGTGGTAAAGC 239
| |||| | | | | | |||||| | ||||||||||||||||||||||||| || |||||
Sbjct 180 TCCGACGATGATTAGAGCGAATTATCCACCTTATGGTTCTGACTTTGAAGGAGGCAAAGC 239
Query 240 TACCGGACGTTTTAGCAATGGCAAAACAATTGCTGATTATATTGCTATCTATTAT-GGTC 298
||||||||||||||| ||||||||||||||||||||||| |||||||| |||||| | |
Sbjct 240 TACCGGACGTTTTAGTAATGGCAAAACAATTGCTGATTACATTGCTATTTATTATAAG-C 298
Query 299 TTCCTTTGGTTCCTGCTTACATGGGATTATCTGAAGA-AGAAAAGAATAATAT-TACAAC 356
||||||||||||||||||| ||||||||||||| || | ||| | | ||| | ||||
Sbjct 299 TTCCTTTGGTTCCTGCTTATTTGGGATTATCTGATGACCG-GAAGGACACTATCT-CAAC 356
Query 357 TGGTTTTAACTATGCTTCTGCTAGTTGTGGGATTCTTCCTGACACAGGAAAGTTAATGGG 416
|||| | ||||||||||||||| | |||||||||| || | |||||||||| || |||
Sbjct 357 TGGTATGAACTATGCTTCTGCTGGCTGTGGGATTCGTCGTCTCACAGGAAAGATAGCGGG 416
Query 417 AAAATGTCTCTCGTTAAGTGTCCAAGTCGATATGTTCAAGGAGACCATCGCAAAA-AATC 475
||||||||| ||||| || ||||||||| ||||| |||| ||||| | |||| ||
Sbjct 417 AAAATGTCTATCGTTGAGCAAACAAGTCGATTTGTTCGAGGAAACCATTG-AAAAGCATT 475
Query 476 TGAAGAAGAACTTCAAGAA-GTC--A-GAGCTCCGTA-AACACTTGGCTGAATCGTTGTT 530
|||||| ||| ||||| || | | | ||| | | | ||||||||||| | ||||||||
Sbjct 476 TGAAGACGAATTTCAA-AACGCCATATGAGTTGAG-AGAACACTTGGCTCACTCGTTGTT 533
Query 531 TATGACCGCAATTGGGGTTAACGATTACGCGTTCTT-TTTCAATATGACAACCGATGCAA 589
||||||| |||||||||||||| || || ||||| | | | || | ||||||||| |
Sbjct 534 CATGACCGTGATTGGGGTTAACGACTATGCATTCTTCTAT-ACTAGGTTAACCGATGCGA 592
Query 590 ATGAGTTT-GCAAAC-AAGCTTCTTCATGA-TTACTTGATACAAATAGAGAGATTGCACA 646
|||| ||| ||| || || ||||||||| | || ||||| | ||||||||| |||||| |
Sbjct 593 ATGA-TTTCGCAGACGAA-CTTCTTCATAAGTT-CTTGAAAAAAATAGAGAAATTGCATA 649
Query 647 AGTTAGGAGCAAGGAAGTTCTTCATCAACAACATTAAACCATTAGGATGTTACCCAAATA 706
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 650 AGTTAGGAGCAAGAAAGTTCTTCATCAACAACATTAAACCATTAGGTTGTTACCCAAATA 709
Query 707 TGGTAGCTAAGACCGTGCCACGCGGAAGCTGCAACGATCCTTTGAACCTTGCGATCAGCA 766
| ||||||||||| || ||||| |||||| | | ||| | | | |||||||| || ||||
Sbjct 710 TAGTAGCTAAGACGGTACCACGAGGAAGCCG-A-CGAACGTATAAACCTTGCTATAAGCA 767
Query 767 TTTTCAAC-ACTAAGCTTAG 785
||| |||| | ||||||||
Sbjct 768 TTTACAACGAA-AAGCTTAG 786
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53965585875
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5