BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg347161

Length=453
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G24910.1 | Symbols: CYP714A1 | cytochrome P450, family 714, ...   165    3e-40


> AT5G24910.1 | Symbols: CYP714A1 | cytochrome P450, family 714, 
subfamily A, polypeptide 1 | chr5:8567581-8570358 REVERSE 
LENGTH=1790
Length=1790

 Score =  165 bits (89),  Expect = 3e-40
 Identities = 155/182 (85%), Gaps = 23/182 (13%)
 Strand=Plus/Plus

Query  211  CTAAGCTTAGATGTCTTCAAAAGGCCATCACTCACAACAACATCCTCTTCA-CCTCAATG  269
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct  814  CTAAGCTTAGATGTCTTCAAAAGGCCATCACTCACAACAACATCCTCTTCAGCCTCAATG  873

Query  270  G-----C----------TTC---AC----AAGCATGGGAACGGGAAGATTGATGAGCTAG  307
            |     |          |||   ||    |||||||||||||||||||||||||||||||
Sbjct  874  GCTTCACTGATGTTGTGTTCGGGACTAAGAAGCATGGGAACGGGAAGATTGATGAGCTAG  933

Query  308  AGAGGCATATTGAGTCTTTGATATGGGAAACTGTTAAGGAAAGAGAAAGGGAATGTGTGG  367
            |||| || ||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct  934  AGAGACACATTGAGTCTTTGATATGGGAAACCGTTAAAGAAAGAGAAAGGGAATGTGTGG  993

Query  368  GA  369
            ||
Sbjct  994  GA  995



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 21564864321


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5