BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg347259
Length=3594
Score E
Sequences producing significant alignments: (Bits) Value
AT1G20960.1 | Symbols: emb1507 | U5 small nuclear ribonucleopro... 3064 0.0
AT2G42270.1 | Symbols: | U5 small nuclear ribonucleoprotein he... 1676 0.0
AT3G28870.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Histone d... 233 7e-60
AT2G02730.1 | Symbols: | Protein of unknown function (DUF1664)... 115 3e-24
> AT1G20960.1 | Symbols: emb1507 | U5 small nuclear ribonucleoprotein
helicase, putative | chr1:7301748-7310250 REVERSE LENGTH=7013
Length=7013
Score = 3064 bits (1659), Expect = 0.0
Identities = 2385/2720 (88%), Gaps = 112/2720 (4%)
Strand=Plus/Plus
Query 274 CCTCGCGATACACATGATCCTACAGGAGAACCAGAAACTCTGT-GGGGAAGAATTGATCC 332
||||| ||||| ||||| |||||||||||||| |||||||||| |||||| ||| |||||
Sbjct 278 CCTCGGGATACTCATGAGCCTACAGGAGAACCGGAAACTCTGTGGGGGAA-AATCGATCC 336
Query 333 GAGGTCTTTTGGTGACCGTGTTGATAAGGGAAAGCCTCAGGAGTTGGAGGATAAACTTAA 392
||||||||||||||||||||||| |||||||| ||||||||||||||||||||| || ||
Sbjct 337 GAGGTCTTTTGGTGACCGTGTTGCTAAGGGAAGGCCTCAGGAGTTGGAGGATAAGCTGAA 396
Query 393 AATGTATAAGAAGAAGAAGGAACGTGATGTTGTAGATGATACT-GTTAATGTTCGGCAGA 451
|| || | ||||||||||||||||||||||||||||||| | || ||| || ||||||
Sbjct 397 AAAGTCT---AAGAAGAAGGAACGTGATGTTGTAGATGATA-TGGTAAATATTAGGCAGA 452
Query 452 GTAAGAGGCGACGTCTTAGGGAAGAGAGTGTGCTCACTGATGATATGGATGCTGCGGTTT 511
|||||||||| ||||| ||||||||||||||||| |||||| | | |||| ||||||||
Sbjct 453 GTAAGAGGCGGCGTCTAAGGGAAGAGAGTGTGCTGACTGAT-A-CT-GATGATGCGGTTT 509
Query 512 ATCAGCCCAAGAGTAATGAGACTAGGGCTGCTTATGAGGCTATGCTTTGTCTTATTCAGC 571
||||||| |||| ||| ||||| |||||||||||||| || |||||| ||||||| |||
Sbjct 510 ATCAGCCGAAGACTAAGGAGACGAGGGCTGCTTATGAAGCCATGCTTGGTCTTATCCAGA 569
Query 572 ATCTGTTGGGTGGGCAACCTCTGAATATTGTTACTGGTGCTGCAGATGAGATTTTGGCTC 631
| | ||||||||||||||||| || |||||||| |||||| || |||||||||||||||
Sbjct 570 AGCAGTTGGGTGGGCAACCTCCGAGTATTGTTAGTGGTGCAGCGGATGAGATTTTGGCTG 629
Query 632 TTCTCAAG-A-G-TG-A---A-AAA-CCTGAGAAAAAGATGGAGATCCACAAGTTGTTGA 682
|||||||| | | | | | ||| |||||||||||||||||||| | |||||| |||
Sbjct 630 TTCTCAAGAATGACGCATTTAGAAACCCTGAGAAAAAGATGGAGATTGAGAAGTTGCTGA 689
Query 683 ACTATATTGAAAATCGTGAGTTTGATCAGCTTGTTTCCTTTGGGAAGTTGATCACCGACT 742
|| | |||||||| | |||||||||||||||||||||| |||| ||||| ||||| ||||
Sbjct 690 ACAAGATTGAAAACCATGAGTTTGATCAGCTTGTTTCCATTGGAAAGTTAATCACGGACT 749
Query 743 TTCAAGAGGCTGGTGATTCTTCTGGTGGT-G-G----TGAGGATG-A-----TGAGGATG 790
| ||||||| |||||||||| ||||||| | | ||| |||| | ||| ||||
Sbjct 750 TCCAAGAGGGTGGTGATTCTGGTGGTGGTAGAGCTAATGATGATGAAGGGCTTGATGATG 809
Query 791 ATTTGGGGGTCGCTGTTGAATTTGAGGACAATGAAGAGGAGAGTGATCAAG-AA--GA-- 845
||||||| || ||||||||||||||||| |||||||| ||| |||| | | || ||
Sbjct 810 ATTTGGGCGTGGCTGTTGAATTTGAGGAGAATGAAGA--AGA-TGATGAGGAAAGCGATC 866
Query 846 C--AT-T-GTTCAAGAGGAGGATTG-TGAGGAGGATCAAGAGCTTACCAGAACTGGAGGT 900
| || | ||| ||||||| || || |||||||||| | |||| |||||||||||||||
Sbjct 867 CTGATATGGTTGAAGAGGATGA-TGATGAGGAGGATGATGAGCCTACCAGAACTGGAGGC 925
Query 901 ATGCAGGTTGGTGCTGGGAT---T--T-ATGACG-A-G-GATGCAAATGAGGGCTCAAAT 951
|||||||||| ||| ||||| | | | || | | | ||||| ||||||||| |||||
Sbjct 926 ATGCAGGTTGATGCAGGGATAAATGATGAGGATGCAGGAGATGCCAATGAGGGCACAAAT 985
Query 952 CTCAATGTTCAAGACATTGATGCATACTGGCTCCAGAGAAGGATATCTCAAGCATATCAA 1011
|| ||||||||||||||||||||||| ||||||||||||| ||| |||||||| ||| ||
Sbjct 986 CTTAATGTTCAAGACATTGATGCATATTGGCTCCAGAGAAAGATCTCTCAAGCGTATGAA 1045
Query 1012 CATAAGATTGATCCACAACAATGCCAGGTACTCTCTGATGACCTGCTTAGGGAT-GTTG- 1069
|| ||||||||||||||||||||||||||||| | || || || | || ||| | |
Sbjct 1046 CAGCAGATTGATCCACAACAATGCCAGGTACTCGCAGAAGAGCTAC-TAAAGATACTCGC 1104
Query 1070 AGAACAAGCTGCTTCTGCACCTTGA--A-AA-AT--TTA-GCACAACAATGCACTTTGAA 1122
||| | || | | |||| | || | ||| |||| | | || | |||
Sbjct 1105 TGAAGGGGATG-ATAGGGTTGTTGAGGACAAGCTGCTTATGCAC--C--TTCAGTACGAA 1159
Query 1123 AAATTTAGCCTCGTTC-ATTTTCTGCTGCGGAACCGTCTTAAAGTTGTGTGGTGCACTCG 1181
||||||||||| | || | ||||||||||| |||||||||||||||||||||||||||||
Sbjct 1160 AAATTTAGCCTTG-TCAAGTTTCTGCTGCGTAACCGTCTTAAAGTTGTGTGGTGCACTCG 1218
Query 1182 TTTGGCTAGGGCACAAGATCAGGAAGAGAGGTACCGAATCGAGGAGGAGATGAGGGCTTT 1241
||||||||||||| |||| |||||||||||| | ||||||||||||||||||||| ||
Sbjct 1219 TTTGGCTAGGGCAGAAGACCAGGAAGAGAGGAATAGAATCGAGGAGGAGATGAGGGGGTT 1278
Query 1242 TGGCCCAGAATTGACAGCAATTGTGGAGCAGTTGCATGCAACTAGAGCTACAGC-AAAGG 1300
|||||||| |||||||||||||||||||||||||||||||| ||||| ||||| ||| |
Sbjct 1279 AGGCCCAGAGTTGACAGCAATTGTGGAGCAGTTGCATGCAACAAGAGCAACAGCGAAA-G 1337
Query 1301 AGAGGGAGGAGAACCTTCAAAAAAGTATTCATGAAGAAGCCCGTCGTCTGAAGGACG-AA 1359
|||||||||||||||| |||||||||||| | || |||||||| ||| ||||||||| ||
Sbjct 1338 AGAGGGAGGAGAACCTGCAAAAAAGTATTAACGAGGAAGCCCGGCGTTTGAAGGACGAAA 1397
Query 1360 --GCT-G-G-T--------------G-GAGATGTTGCTGACAGAGATTTAGAGAGTGGCT 1399
| | | | | | ||||||||||||| ||||||| ||||||||| |
Sbjct 1398 CTGGTGGAGATGGAGGCAGAGGCAGGAGAGATGTTGCTGATAGAGATTCAGAGAGTGGGT 1457
Query 1400 GGGTGAAGGGCCAGCGTCAGTTGCTTGACCTGGAGAGCTTGGCTTTTGACCAAGGTGCTC 1459
|||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| ||
Sbjct 1458 GGGTGAAGGGTCAGCGTCAGATGCTGGACCTGGAGAGCTTGGCTTTTGACCAAGGTGGTC 1517
Query 1460 ACT-TGATGGCGAACAAGAAGTGTGACCTTCCCCCTGGGTCTTACAGAATTCATGGCAAG 1518
| |||||||||| |||||||||||||| |||||||| |||||||||| ||||||||||
Sbjct 1518 -TTCTGATGGCGAATAAGAAGTGTGACCTCCCCCCTGGCTCTTACAGAAGTCATGGCAAG 1576
Query 1519 GGATATGATGAAGTTCATGTCCCATGGGTTTCTAAAAAGGTGGATAGAAATGAGAAGCTT 1578
|||||||||||||||||||| || ||||||||||||||||| ||||| |||||||||||
Sbjct 1577 GGATATGATGAAGTTCATGTGCCTTGGGTTTCTAAAAAGGTTGATAGGAATGAGAAGCTA 1636
Query 1579 GTAAAGATTACCGAAATGCCTGATTGGGCCCAACCGGCTTTCAAGGGAATGCAACACTTG 1638
|| |||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct 1637 GTGAAGATTACGGAAATGCCTGATTGGGCGCAACCGGCTTTTAAGGGAATGCAACAGTTG 1696
Query 1639 AACAGGGTTCAGAGCAAAGTGTACGAGACTGCACTTTTTAAGGCAGAGAACATTCTTCTT 1698
||||||||||||||||||||||| || ||||| ||||| ||||||||||| |||||||||
Sbjct 1697 AACAGGGTTCAGAGCAAAGTGTATGACACTGCGCTTTTCAAGGCAGAGAATATTCTTCTT 1756
Query 1699 TGTGCTCCCACTGGTGCTGGGAAAACCAATGTTGCTATGCTGACCATACTGCAGCAACTT 1758
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1757 TGTGCTCCAACTGGTGCTGGGAAAACCAATGTTGCTATGCTCACCATACTGCAGCAACTT 1816
Query 1759 GAATTGAATAGGAACGA-AGATGGAACTTACAACCATGGAGATTACAAAATTGTCTATGT 1817
||| ||||||||||| | |||||||||||| |||||||||||||||||||||||||||||
Sbjct 1817 GAAATGAATAGGAAC-ACAGATGGAACTTATAACCATGGAGATTACAAAATTGTCTATGT 1875
Query 1818 TGCACCCATGAAAGCCCTTGTTGCTGAAGTTGTAGGTAATTTGTCTAATTGTCTGAAGGA 1877
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1876 TGCACCCATGAAAGCCCTTGTTGCTGAAGTTGTAGGTAATTTGTCTAATCGTCTGAAGGA 1935
Query 1878 TTATGGAGTTACTGTGAGAGAACTCAGTGGCGATCAGTCCCTAACTGGGAGAGAAATTGA 1937
||||||||||| |||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct 1936 TTATGGAGTTATTGTGAGAGAACTCAGTGGGGATCAGTCCCTAACCGGAAGAGAAATTGA 1995
Query 1938 AGAGGCTCAGGTAATTGTTACAACACCAGAGAAATGGGATATCATCACTAGGAAGTCTGG 1997
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1996 AGAGACTCAGATAATTGTTACAACACCAGAGAAATGGGATATCATCACTAGGAAGTCTGG 2055
Query 1998 AGATCGAACTTATACTCAGTTTGTGAGACTTCTTATAATCGATGAAATTCACCTCCTTCA 2057
||| ||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||
Sbjct 2056 AGACCGAACTTATACTCAGCTTGTGAGACTTCTTATAATTGATGAAATTCATCTCCTTCA 2115
Query 2058 TGATAACCGAGGGCCTGTGCTTGAAAGCATTGTCGCTAGGACTCTTAGGCAAATTGAAAC 2117
||| || |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2116 TGACAATCGAGGGCCTGTGCTTGAAAGCATTGTTGCTAGGACTCTTAGGCAAATTGAAAC 2175
Query 2118 CACGAAAGATAATATTCGTCTGGTGGGTTTATCTGCTAC-TCTGCCAAATTATGAAGACG 2176
||||||||| |||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct 2176 CACGAAAGAGAATATTCGTCTGGTTGGTTTATCTGCTACAT-TGCCAAATTATGAAGACG 2234
Query 2177 TGGCCTTATTTTTGCGGGTTGATCTTAAGAAAGGATTGTTTAAATTTGACAGCAGCTACA 2236
|||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 2235 TGGCCTTATTTTTGCGGGTTGATCTTAAGAAAGGTTTGTTTAAATTTGACCGCAGCTACA 2294
Query 2237 GACCCGTGTCTCTCCATCAGCAGTATATTGGAATCAGTGTGAAGGAACCGTTGCAGAGGT 2296
|||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2295 GACCCGTGCCTCTCCATCAGCAGTATATTGGAATCAGTGTGAAGAAACCGTTGCAGAGGT 2354
Query 2297 TCCAATTGATGAATGATCTATGTTATCAGAATGTACTGGCTTGTGCTGGAAAGCACCAGG 2356
|||| |||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||
Sbjct 2355 TCCAGTTGATGAATGATCTTTGTTATCAGAAAGTATTGGCTGGTGCTGGAAAGCACCAGG 2414
Query 2357 TCCTTATTTTTGTTCATTCGAGAGA-GGAAACAGCAAAAACTGCAATAGCATTATGCGAC 2415
||||||||||||||||||| || || ||||||| |||||||||| | |||| || | |||
Sbjct 2415 TCCTTATTTTTGTTCATTCAAG-GAAGGAAACATCAAAAACTGCTAGAGCAATAAGGGAC 2473
Query 2416 ACTGCAATGGCGAACGATACCCTCAGCAGATTCTTGAAGGAAGATAGTGAAAGTCGTGAA 2475
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 2474 ACTGCAATGGCGAACGATACCCTCAGCAGATTCTTGAAGGAAGATAGTGTAACTCGTGAC 2533
Query 2476 GTTCTTT-TGAATCACTTC-GACTTTGTTAAGTATTA-TGACCTGAAAGGA-ATTCTGCC 2531
||||| | | ||| | ||| |||||||| || | |||||| |||| | ||||||||
Sbjct 2534 GTTCTCCAT-AGTCA-TGAAGACATTGTTAAGAAT-AGTGACCTAAAAG-ATATTCTGCC 2589
Query 2532 TTACGGGTTTGCAATTCATCATGCTGGGTTAACAAGAAGTGATCGTGAGATTGTTGAGGG 2591
|||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 2590 TTACGGTTTTGCAATTCATCATGCTGGGTTATCAAGGGGTGATCGTGAGATTGTTGAGAC 2649
Query 2592 TCTTTTTGCTAAAGGGCATGTGCAAGTCTTGGTTTCCACAACAACTTTCGCTTGGGGTGT 2651
||||||| || | ||||||||||||||||||||||||||| ||||| |||| ||||||||
Sbjct 2650 TCTTTTTTCTCAGGGGCATGTGCAAGTCTTGGTTTCCACAGCAACTCTCGCATGGGGTGT 2709
Query 2652 GAATCTGCCTGCACATACCGCTA-TTATAAAAGGAACCAAGGTGTATAATCCTGAAAAAG 2710
|||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||
Sbjct 2710 GAATCTGCCTGCACATACCG-TAATTATAAAAGGAACCCAGGTGTATAATCCTGAAAAAG 2768
Query 2711 GGGCGTGGATGGAGTTGAATCCTCTAGATGTTATGCAGATGCTTGGTCGTGCTGGAAGAC 2770
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2769 GGGCGTGGATGGAGCTGAGTCCTCTAGATGTTATGCAGATGCTTGGTCGTGCTGGAAGAC 2828
Query 2771 CTAAGTATGATCAACATGGGGAGGGTATAATTATCACTGGCTATACCGAGCGGCAATATT 2830
|| ||||||||||||||||||||||||||||||| |||||||| | ||||| ||||||||
Sbjct 2829 CTCAGTATGATCAACATGGGGAGGGTATAATTATAACTGGCTACAGCGAGCTGCAATATT 2888
Query 2831 ATCTTTCTTTGATGAATGAGCAACTACCTATTGAAAGCCAGTTTATTTCTAGACTTGCTG 2890
||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 2889 ATCTTTCTTTGATGAATGAGCAACTACCTATTGAAAGCCAGTTTATTTCCAAACTTGCTG 2948
Query 2891 ATCAGCTTAATGCTGAAATT 2910
||||||||||||||||||||
Sbjct 2949 ATCAGCTTAATGCTGAAATT 2968
Score = 1040 bits (563), Expect = 0.0
Identities = 643/683 (94%), Gaps = 0/683 (0%)
Strand=Plus/Plus
Query 2912 CTGCAACCAGACTTCTTCACGCGATGGTCGATGTGATATCGAGCAATGGCTGGCTAAATC 2971
||||||||||||||||||| |||||||||||||||||||| |||||||||||||| ||||
Sbjct 6015 CTGCAACCAGACTTCTTCAAGCGATGGTCGATGTGATATCAAGCAATGGCTGGCTGAATC 6074
Query 2972 TTGCTCTGTTAGCTATGGAAGTAAGTCAGATGGTGACTCAAGGCATGTGGGAGCGAGACT 3031
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||
Sbjct 6075 TTGCTCTGCTAGCTATGGAAGTAAGCCAGATGGTGACTCAAGGCATGTGGGAGCGGGACT 6134
Query 3032 CTATGCTTTTGCAGCTCCCTCACTTCACAAAGGTCTTGGCCAAGAGGTGCCAGGAGAATC 3091
| |||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 6135 CCATGCTTCTGCAGCTCCCTCACTTCACAAAAGACTTGGCCAAGAGGTGCCAGGAGAATC 6194
Query 3092 CGGGGAAAAACATTGAAACCGTAGTCGATCTTGTGGAGATGGAAGACAAAGAACGCCAAG 3151
| ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||
Sbjct 6195 CAGGGAAAAACATTGAAACCGTATTCGATCTTGTGGAGATGGAGGATGAAGAACGCCAAG 6254
Query 3152 AGCTTCTGAAGATGTCAGACGCTCAGCGTCTAGATATTGCCAGATTCTGCAACCGCTTCC 3211
||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 6255 AGCTTCTCAAGATGTCAGACGCTCAGCTTCTAGACATTGCCAGATTCTGCAACCGCTTCC 6314
Query 3212 CAAACATCGACCTTACTTATGAGGTTGTGGGCAGTGAAGAGGTGACCCCAGGGAAAGAGG 3271
||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||
Sbjct 6315 CAAACATCGACCTTACTTACGAGATTGTGGGCAGTGAAGAGGTGAACCCAGGGAAAGAGG 6374
Query 3272 TTACATTGCAAGTGATGCTTGAGAGAGACATGGAGGGGAAGACAGAAGTGGGACCCGTGG 3331
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 6375 TTACATTGCAAGTGATGCTTGAGAGAGACATGGAGGGGAGGACAGAAGTGGGACCTGTGG 6434
Query 3332 ATTCACTCAGGTATCCCAAGACCAAAGAAGAAGGATGGTGGCTGGTTGTGGGCGACACCA 3391
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 6435 ATTCACTGAGGTATCCCAAGACCAAAGAAGAAGGATGGTGGCTGGTCGTGGGCGACACCA 6494
Query 3392 AGACGAACCAGTTGCTGGCAATCAAGCGTGTCTCATTGCAACGGAACGTGAAGGTGAAGC 3451
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 6495 AGACAAACCAGTTGCTGGCAATCAAGCGTGTCTCATTGCAACGGAAAGTGAAGGTGAAGC 6554
Query 3452 TGGCTTTCACAGTACCAAGTGAACTAGGAGAGAAGTCATACACACTATACTTTATGTGCG 3511
||| |||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct 6555 TGGATTTCACAGCACCGAGTGAACCAGGAGAGAAGTCATACACACTATACTTCATGTGTG 6614
Query 3512 ACTCTTACTTGGGCTGTGACCAAGAGTACTCTTTCTCGGTTGATGTCAAAGGATCTGGCG 3571
||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||||
Sbjct 6615 ACTCTTACTTGGGGTGTGACCAAGAGTACTCGTTCTCTGTTGATGTCAAAGGATCCGGCG 6674
Query 3572 TTGGAGATCACATGGAAAAATGA 3594
|||||||| ||||||| |||||
Sbjct 6675 CTGGAGATCGCATGGAAGAATGA 6697
> AT2G42270.1 | Symbols: | U5 small nuclear ribonucleoprotein
helicase | chr2:17604330-17611333 FORWARD LENGTH=6906
Length=6906
Score = 1676 bits (907), Expect = 0.0
Identities = 2169/2754 (79%), Gaps = 184/2754 (7%)
Strand=Plus/Plus
Query 276 TCGCGATACACATG-ATCCTACAGGAGAACCAGAAACTCTGTGGGGAAGAATTGATCCGA 334
||| ||||| |||| || || | || ||||| || | ||| |||| || ||||||||||
Sbjct 102 TCGTGATACGCATGAAT-CTTCTGGTGAACCGGAGAGTCTCAGGGGTAGGATTGATCCGA 160
Query 335 GGTCTTTTGGTGACCGTGTTGATAAGGGAAAGCCTCAGGAGTTGGAGGATAAACTTAA-A 393
|| ||||| || ||||| | || ||||| |||||| ||||| || || ||||| |
Sbjct 161 AATCCTTTGGAGATCGTGTCGTTAGGGGAAGGCCTCATGAGTTAGATGAGCGGCTTAATA 220
Query 394 ATGTATAAGAAGAAGAAGGAACGTGATGTTGTAGATGATACT-GT-TAATGTTCG-GCAG 450
| | ||||||||||||||||| ||||| |||||| | || | || ||| | ||
Sbjct 221 A-ATCTAAGAAGAAGAAGGAAC-----GTTGT-GATGAT-TTGGTGT-CTGCTCGTG-AG 270
Query 451 AGTAAGAGGCG-ACGTCTTAGGGAAGAGAGTGTGCTCACTGATGATATGGATGCTGCG-G 508
|| || | | | ||||||||||| | |||||| || | |||||| ||| | || | |
Sbjct 271 AGCAA-AAGAGTTCGTCTTAGGGAGGTGAGTGTACT---TAATGATACGGAGGATG-GTG 325
Query 509 TTTATCAGCCCAAGAGTAATGAGACTAGGGCTGCTTATGAGGCTATGCTTTGTCTTATTC 568
|||||||||| |||| ||| || || |||| ||||| |||| ||||||| ||||||| |
Sbjct 326 TTTATCAGCCGAAGACTAAGGAAACAAGGGTTGCTTTTGAGATTATGCTTGGTCTTATCC 385
Query 569 AGCATCTGTTGGGTGGGCAACCTCTGAATATTG-TTACTGGTGCTGCAGATGAGATTTTG 627
|||| | ||||||||||| ||| || | |||| || | ||||| || ||||||||||||
Sbjct 386 AGCAGCAATTGGGTGGGCAGCCTTTGGACATTGTTTGC-GGTGCGGCTGATGAGATTTTG 444
Query 628 GCTCTTCTCAAG-A-G--T--G--AAAAACC-TGAGAAA-AAGATGGAGATCCACAAGTT 677
|| |||| ||| | | | | ||||||| ||| ||| ||| | ||||| | || |
Sbjct 445 GCAGTTCTTAAGAATGAATCCGTCAAAAACCATGA-AAAGAAGGTAGAGATTGAGAAACT 503
Query 678 GTTGAAC-TATATTGA-AAATCGTGAG-TTTGA-TCAGCTTGTTTCCTTTGGGAAGTTGA 733
| ||| | |||| | ||| | | ||| | |||| ||||||| |||| || |||
Sbjct 504 ACTAAACGT-TATT-ACTGATC-AG-GTTTTCAGTCAGTTTGTTTCGATTGGAAAACTGA 559
Query 734 TCACCGACTTTCAAGAGGCTGGTGATTC-TT--CTGGT---GGTGGTGAGGAT----GA- 782
| || |||| | |||||| ||||||||| || |||| | | |||||||| ||
Sbjct 560 TTACAGACTATGAAGAGGGTGGTGATTCTTTAAGTGGTAAAGCTAGTGAGGATGGAGGAC 619
Query 783 -TGAGGATGAT-TTGGGGGTCGCTGTTGAATTTGAGGACAATGAAGAGGAGAGTGATCAA 840
||| ||||| || || || || |||||| ||| || |||| || ||||||||||
Sbjct 620 TTGATTATGATATT-GGTGTTGCCCTTGAATGTGAAGAGGATGATGATGAGAGTGATCTT 678
Query 841 GA-A--G-ACA--TTGTTCAAGAGGAGGATTG-TGAGGAGGATCAAGAGCTTACCAGAAC 893
|| | | || || |||| ||||| | ||| || | | ||||||| || |||
Sbjct 679 GATATGGTCCAGGATGAAAAAGATGAGGA-GGATGAAGATGTTGTTGAGCTTAACAAAAC 737
Query 894 TGGAGGTATGCAGGTTGGTGCTGG-GATTTATGACGAGGATGC-A-A-ATG---A-G-GG 944
||||| | | ||||| |||| ||| || | | ||||||||| | | | | | | ||
Sbjct 738 TGGAGTTGTCCAGGTGGGTG-TGGCAATAAACGGCGAGGATGCAAGACAGGCAAAGGAGG 796
Query 945 CT-CAAATCTCAATGTTCAAGACATTGATGCATACTGGCTCCAGAGAAGGATATCTCAAG 1003
| | | ||| ||||||| || |||||||| || ||||| ||||||| |||||||||||
Sbjct 797 ATACGAGTCTTAATGTTCTGGATATTGATGCTTATTGGCTTCAGAGAAAGATATCTCAAG 856
Query 1004 CATATCAACATAAGATTGATCCACAACAATGCCAGGTACTCTCTGATGACCTGCTT-AGG 1062
|||| | || ||||||||| ||||| | ||||||| |||| | || || |||||| ||
Sbjct 857 AATATGAGCAGAAGATTGATGCACAAGAGTGCCAGGAACTCGCAGAAGAGCTGCTTAAGA 916
Query 1063 GA--TGTTGAGAACAAGCTGCTTCTGCACCTTGA-A--AA-AT--TT-AGCACAACAATG 1113
| || |||| || || | | | |||| | || | || ||||| | |
Sbjct 917 TACTTGCTGAGGGTAA--TG-ATAGGGATGTTGAGATCAAGCTGCTTGAGCAC--C--TT 969
Query 1114 CACTTTGAAAAATTTAGCCTCGTTCATTTTCTGCTGCGGAACCGTCTTAAAGTTGTGTGG 1173
|| |||||||| || ||||| ||| | |||||| ||| |||||||||||||||||||||
Sbjct 970 CAGTTTGAAAAGTTCAGCCTTGTTAAATTTCTGTTGCAAAACCGTCTTAAAGTTGTGTGG 1029
Query 1174 TGCACTCGTTTGGCTAGGGCACA-AGATCAGGAAGAGAGGTACCGAATCGAGGAGGAGAT 1232
||||| ||||||||||||| | | ||| |||||||||||| | | ||| |||||||||||
Sbjct 1030 TGCACCCGTTTGGCTAGGGGA-AGAGACCAGGAAGAGAGGAATCAAATTGAGGAGGAGAT 1088
Query 1233 G-AGGGCTTTTGGCCCAGAATTGACAGCAATTGTGGAGCAGTTGCATG-CAACTAGAGCT 1290
| ||| || || |||| ||| |||||||||| || ||||||||| ||| |||||
Sbjct 1089 GTTGGG-GTTAGGTTCAGAGTTGGCAGCAATTGTTAAGGAGTTGCATGCCAA-AAGAGCA 1146
Query 1291 ACAG-CAAAGGAGAGGGAGGAGAACCTTCAAAAAAGTAT-TC-ATGAAGAAG--C--C-- 1341
|||| |||| || ||||||||||| | | |||| || || | ||||||| | |
Sbjct 1147 ACAGCCAAA-GAAAGGGAGGAGAAAC-GGGAGAAAG-ATATCAAAGAAGAAGCTCAACAT 1203
Query 1342 C-----G-T--CG--TCTGAAG--GACGAAG-C--TGG--TG-GAGATGTTGCTGACAGA 1383
| | | | |||| | |||| || | || || ||||||||| ||| |
Sbjct 1204 CTTATGGATGATGATTCTGGTGTTGACGGAGACAGAGGCATGAGAGATGTTGATGATTTA 1263
Query 1384 GATTTAGAGAGTGGCTGGGTGAAGGGCCAGCGTCAGTTGCTTGACCTGGAGAG-CTTGGC 1442
||||| |||| ||| ||| ||||||||||||||||| || | ||||||||||| ||| ||
Sbjct 1264 GATTTGGAGAATGGTTGGTTGAAGGGCCAGCGTCAGGTGATGGACCTGGAGAGCCTT-GC 1322
Query 1443 TTTTGACCAAGGT-G-CTCACTTGATGGCGAACAAGAAGTGTGACCTTCCCCCTGGGTCT 1500
|||| |||||||| | |||| || || ||| || |||||||| ||||| | | |||
Sbjct 1323 TTTTAACCAAGGTGGTTTCAC--GAGGGAGAATAACAAGTGTGAGCTTCCTGATCGCTCT 1380
Query 1501 TACAGAATTCATGGCAAGGGATATGATGAAGTTCATGTCCCATGGGTTTCTAAAAAGGTG 1560
| |||||| | |||||||| || |||||| |||||||| || ||||||||||||||| |
Sbjct 1381 TTCAGAATACGTGGCAAGGAATTTGATGAGGTTCATGTGCCGTGGGTTTCTAAAAAGTTT 1440
Query 1561 GATAGAAATGAGAAGCTTGT-AAAGATTACCGAAATGCCTGATTGGGCCCAACCGGCTTT 1619
||||| ||||| |||||||| ||| |||| ||| |||| || ||||||||||| |||||
Sbjct 1441 GATAGTAATGAAAAGCTTGTGAAA-ATTAGCGATTTGCCAGAGTGGGCCCAACCAGCTTT 1499
Query 1620 CAAGGGAATGCAACACTTGAACAGGGTTCAGAGCAAAGTGTACGAG-ACTGCACTTTTTA 1678
| ||||||||| || ||||| |||||||||||||||||||||| | ||||| |||||||
Sbjct 1500 TAGGGGAATGCAGCAGTTGAATAGGGTTCAGAGCAAAGTGTACG-GCACTGCTCTTTTTA 1558
Query 1679 AGGCAGAGAACATTCTTCTTTGTGCTCCCACTGGTGCTGGGAAAACCAATGTTGCTATGC 1738
|||| || |||||||||||||||||||| |||||||||||||| ||||||||||| |||
Sbjct 1559 AGGCTGACAACATTCTTCTTTGTGCTCCAACTGGTGCTGGGAAGACCAATGTTGCCGTGC 1618
Query 1739 TGACCATACTGCAGCAACTTGAATTGAATAGGAACGAAGATGGAAC-TTACAACCATGG- 1796
| ||||||||||| || |||| |||||||| |||| | |||||| || || |||||
Sbjct 1619 TCACCATACTGCACCAGCTTGGATTGAATATGAACCCTGGTGGAACGTT-TAATCATGGT 1677
Query 1797 AGATTACAAAATTGTCTATGTTGCACCCATGAAAGCCCTTGTTGCTGAAGTTGTAGG-TA 1855
| ||||||||||||||||||||||||| |||||||||||||||||||| || || || ||
Sbjct 1678 A-ATTACAAAATTGTCTATGTTGCACCAATGAAAGCCCTTGTTGCTGAGGTCGT-GGATA 1735
Query 1856 ATTTGTCT-AATTGTCTGAAGGATTATGGAGTTACTGTG-AGAGAACTCAGTGGCGATCA 1913
| | ||| || || ||||||||| ||||||||||||| || ||||||||||| |||||
Sbjct 1736 GTCTATCTCAA-CGTTTGAAGGATTTTGGAGTTACTGTGAAG-GAACTCAGTGGGGATCA 1793
Query 1914 GTCCCTAACTGGG-AGAGAAATTGAAGAGGCTCAGGTAATTGTTACAACACCAGAGAAAT 1972
|||||| |||||| | |||||| ||||| ||||| ||||||||||||| |||||||| |
Sbjct 1794 GTCCCTTACTGGGCA-AGAAATCAAAGAGACTCAGATAATTGTTACAACGCCAGAGAAGT 1852
Query 1973 GGGATATCATCACTAGGAAGTCTGGAGATCGAACTTATACTCAGTTTGTGAGACTTCTTA 2032
||||||||||||| ||||| ||||||||||| |||||||| ||| ||||||| |||||||
Sbjct 1853 GGGATATCATCACCAGGAAATCTGGAGATCGCACTTATACACAGCTTGTGAGGCTTCTTA 1912
Query 2033 TAATCGATGAAATTCACCTCCTTCATGATAACCGAGGGCCTGTGCTTGAAAGCATTGTCG 2092
||||||| |||||||| || ||| ||||||| |||||||||||||||||||| |||||||
Sbjct 1913 TAATCGACGAAATTCATCTTCTTGATGATAATCGAGGGCCTGTGCTTGAAAGTATTGTCG 1972
Query 2093 CTAGGACTCTTAGGCAAATTGAAACCACGAAA-GATAATATTCGTCTGGTGGGTTTATCT 2151
|||||||||||||||| ||||||| ||| ||| || ||||||||||||| |||||||||
Sbjct 1973 CTAGGACTCTTAGGCAGATTGAAAGCAC-AAAGGAGCATATTCGTCTGGTAGGTTTATCT 2031
Query 2152 GCTACTCTGCCAAATTATGAAGACGTGGCCTT-ATTTTTGCGGGTTGATCTTAAGAAA-G 2209
|| || |||||||||| ||| || |||| ||| ||||||||| || |||||||| ||| |
Sbjct 2032 GCAACACTGCCAAATTGTGACGATGTGG-CTTCATTTTTGCGAGTGGATCTTAA-AAATG 2089
Query 2210 GATTGTTTAAATTTGACAGCAGCTACAGACCCGTGTCTCTCCATCAGCAGTATATTGGAA 2269
| ||||||| ||||||| | ||||||||||| ||| ||||| |||||||||||| ||||
Sbjct 2090 GGTTGTTTATATTTGACCGTAGCTACAGACCTGTGCCTCTCGGTCAGCAGTATATAGGAA 2149
Query 2270 TCAGTGTGAAGGAA-CCGTTGCAGAGGTTCCAATTGATGAATGATCTATGTTATCAGAAT 2328
| | |||||| || ||||| | ||||||||| |||||||||||| |||||||||||||
Sbjct 2150 TTAATGTGAA-AAAGCCGTTACGGAGGTTCCAGTTGATGAATGATATATGTTATCAGAAA 2208
Query 2329 GTACTGGCTTG-TGCTGGAAAGCACCAGGTCCTTATTTTTGTTCATTCGA-GAGAGGAAA 2386
||| |||| || ||||||||| |||||||||||||||||||||||||||| || ||||||
Sbjct 2209 GTAGTGGC-TGTTGCTGGAAAACACCAGGTCCTTATTTTTGTTCATTCGAGGA-AGGAAA 2266
Query 2387 CAGCAAAAACTGCAATAGCATTATGCGACACTGCAATGGCGAACGATACCCTCAGCAGAT 2446
||||||||||||||| ||| || | ||||| || ||||| || ||||||||||||||||
Sbjct 2267 CAGCAAAAACTGCAAGGGCAATACGGGACACAGCTATGGCAAATGATACCCTCAGCAGAT 2326
Query 2447 TCTTGAAGGAAGATAGTGAAAGTCGTGAAGTTCTTT--TGAATCA-CTTCGACTTTGTTA 2503
||||||||||||||||| ||||||||||| ||||| || | | || ||||| | |
Sbjct 2327 TCTTGAAGGAAGATAGTCAAAGTCGTGAAATTCTTAAGTGTTT-AGCTG-GACTTC-TCA 2383
Query 2504 AGTATTATGACCTGAAAG-GAATTCTGCCTTACGGGTTTGCAATTCATCATGCTGGGTTA 2562
|| || |||||||||||| | |||||||||| || |||||||||||||||||||||||
Sbjct 2384 AGAATAATGACCTGAAAGAGC-TTCTGCCTTATGGTTTTGCAATTCATCATGCTGGGTTG 2442
Query 2563 ACAAGAAGTGATCGTGAGATTGTTGAGGGTCTTTTT-GCTAAAGGGCATGTGCAAGTCTT 2621
||||| | |||||||||||| |||||| || ||| ||| ||| || ||||||| ||
Sbjct 2443 ACAAGGACTGATCGTGAGATAGTTGAGAATCAATTTCGCTGG-GGGAATTTGCAAGTGTT 2501
Query 2622 GGTTTCCACAACAACT-TTCGCTTGGGGTGTGAATCTGCCTGCACATACCG-CTATTATA 2679
| ||||||| ||||| || || |||||||||||| ||||||||||||| | | |||||
Sbjct 2502 GATTTCCACGGCAACTCTT-GCCTGGGGTGTGAATTTGCCTGCACATACTGTC-ATTATC 2559
Query 2680 AAAGGAACC-AAGGTGTATAATCCTGAAAAAGGGGCGTGGATGGAGTTGAATCCTCTAGA 2738
||||||||| ||| | ||||||||||| | ||||| |||||||||| ||| |||| ||||
Sbjct 2560 AAAGGAACCCAAG-TATATAATCCTGAGAGAGGGGAGTGGATGGAGCTGAGTCCTTTAGA 2618
Query 2739 TGTTATGCAGATGCTTGGTCGTGCTGGAAGACCT-AAGTATGATCAACATGGGGAGGGTA 2797
||||||||||||| |||||||||| ||||||||| || ||||| ||||| |||||||| |
Sbjct 2619 TGTTATGCAGATGATTGGTCGTGCCGGAAGACCTCAA-TATGACCAACAAGGGGAGGGAA 2677
Query 2798 TAATTATCACTGGCTATACCGAGCGGCAATATTATCTTTC-TTTGATGAATGAGCAACTA 2856
|||| |||||||| || | | ||| || ||||||||| | |||||||||||||||||||
Sbjct 2678 TAATAATCACTGGATACAGCAAGCTACAGTATTATCTT-CGTTTGATGAATGAGCAACTA 2736
Query 2857 CCTATTGAAAGCCAGTTTATTTCTAGACTTGCTGATCAGCTTAATGCTGAAATT 2910
||||||||||||||||||||||| | ||||||||||||||| ||||||||||||
Sbjct 2737 CCTATTGAAAGCCAGTTTATTTCCAAACTTGCTGATCAGCTCAATGCTGAAATT 2790
Score = 676 bits (366), Expect = 0.0
Identities = 586/691 (85%), Gaps = 20/691 (3%)
Strand=Plus/Plus
Query 2914 GCAACCAGACTTCTTCACGCGATGGTCGATGTGATATCGAGCAATGGCTGGCTAAATCTT 2973
||||| || |||||||| || ||||||||||||||||||||||||||||| || ||||||
Sbjct 5839 GCAACAAGGCTTCTTCAAGCAATGGTCGATGTGATATCGAGCAATGGCTGTCTGAATCTT 5898
Query 2974 GCTCTGTTAGCTATGGAAGTAAGTCAGATGGTGACTCAAGGCATGTGGGAGCGAGACTCT 3033
||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 5899 GCTCTTTTAGCTATGGAAGTAAGCCAGATGGTGACTCAAGGCATGTGGGATCGAGACTCC 5958
Query 3034 ATGCTTTTGCAGCTCCCTCACTTCACAAAGGTCTTGGCCAAGAGGTGCCAGGAGAATCCG 3093
|||||| ||||||| |||||||||||||||| ||| ||||| |||||||| |||||||||
Sbjct 5959 ATGCTTCTGCAGCTTCCTCACTTCACAAAGGACTTAGCCAAAAGGTGCCATGAGAATCCG 6018
Query 3094 GGGAAAAACATTGAAACCGTAGTCGATCTTGTGGAGATGGAAGACAA-AGAACGCCAAGA 3152
||||| |||||||||||| || | ||||||||||| |||||||| | | ||||||||||
Sbjct 6019 GGGAATAACATTGAAACCATATTTGATCTTGTGGAAATGGAAGATGACA-AACGCCAAGA 6077
Query 3153 GCTTCTG-AAGATGTCAGACGCTCAGCGTCTAGATATTGCCAGATTCTGCAACCGCTTCC 3211
|||||| || |||||||||||||||| ||| || |||||||||||||||||||||||||
Sbjct 6078 GCTTCTCCAA-ATGTCAGACGCTCAGCTTCTTGACATTGCCAGATTCTGCAACCGCTTCC 6136
Query 3212 CAAACATCGACCTTACTTATGAGGTTGTGGGCAGTGAA-GAGGTGACCCCAGGGAAAGAG 3270
| ||||| |||||||| |||||| ||||||| ||| || ||||| | ||| || |||||
Sbjct 6137 CCAACATTGACCTTACATATGAGATTGTGGGAAGT-AACGAGGTAAGCCCTGGAAAAGAT 6195
Query 3271 GTTACATTGCAAGTGATG-CTTGAGAGAGACATGGAGGGGAAG-ACAGAAGTGGGACCCG 3328
| |||||||| || || || ||||||||||||||||| ||| || || |||||||| |
Sbjct 6196 ATCACATTGCAGGT-ATTACTGGAGAGAGACATGGAGGG-AAGGACCGAGGTGGGACCTG 6253
Query 3329 TGGATTCACTCAGG-TATCCCAAGACCAAAGAAGAAGGATGGTGGCTGGTTGTGGGCGAC 3387
|||| | | || | ||||| ||||| ||||||||||| |||||||| || || || ||
Sbjct 6254 TGGACGCGC-CAAGATATCCTAAGACTAAAGAAGAAGGTTGGTGGCTAGTCGTTGGAGA- 6311
Query 3388 A-CCAAGACGAACCAGTTGCTGGCAATCAAGCGTGTCTCATTGCAACGGAACGTGAAGGT 3446
| ||||||||||||||||| |||| |||||| | |||| |||||||||| | | ||||
Sbjct 6312 AGCCAAGACGAACCAGTTGATGGCCATCAAGAGAATCTCCCTGCAACGGAAGGCGCAGGT 6371
Query 3447 GAAGCTGGC-TTTCACAGTACCAAGTGAA-CTAGGAGAGAAGTCATACACACTATACTTT 3504
|||||||| ||| ||||||||| |||| | |||||||||||| || ||||| |||||
Sbjct 6372 GAAGCTGGAGTTTG-CAGTACCAACTGAAAC-AGGAGAGAAGTCGTATACACTCTACTTC 6429
Query 3505 ATGTGCGACTCTTACTTGGGCTGTGACCAAGAGTACTCTTTCTCGGTTGATGTCAAAGGA 3564
|||||||| ||||||||||| |||||||| ||||| |||||| | ||||||||||||| |
Sbjct 6430 ATGTGCGATTCTTACTTGGGTTGTGACCAGGAGTATTCTTTCACTGTTGATGTCAAAG-A 6488
Query 3565 T-CTGGCGTTGGAGATCACATGGAAAAATGA 3594
| ||| | | ||||||||||||| |||||
Sbjct 6489 TTCTGATGCCGCAGATCACATGGAAGAATGA 6519
> AT3G28870.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Histone
deacetylase interacting (InterPro:IPR013194), Sec63 domain
(InterPro:IPR004179); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G24260.1); Has 531 Blast hits
to 527 proteins in 118 species: Archae - 0; Bacteria - 10;
Metazoa - 251; Fungi - 29; Plants - 170; Viruses - 0; Other
Eukaryotes - 71 (source: NCBI BLink). | chr3:10890355-10891839
FORWARD LENGTH=1068
Length=1068
Score = 233 bits (126), Expect = 7e-60
Identities = 144/153 (94%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 3442 AAGGTGAAGCTGGCTTTCACAGTACCAAGTGAACTAGGAGAGAAGTCATACACACTATAC 3501
||||| || || | |||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 916 AAGGTAAAACTTGATTTCACAGTACCGAGTGAACCAGGAGAGAAGTCATACACACTATAC 975
Query 3502 TTTATGTGCGACTCTTACTTGGGCTGTGACCAAGAGTACTCTTTCTCGGTTGATGTCAAA 3561
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 976 TTTATGTGTGACTCTTACTTGGGCTGTGACCAAGAGTACTCTTTCTCGGTTGATGACAAA 1035
Query 3562 GGATCTGGCGTTGGAGATCACATGGAAAAATGA 3594
||||||||||||||||||||||||||| |||||
Sbjct 1036 GGATCTGGCGTTGGAGATCACATGGAAGAATGA 1068
> AT2G02730.1 | Symbols: | Protein of unknown function (DUF1664)
| chr2:764604-767436 REVERSE LENGTH=1523
Length=1523
Score = 115 bits (62), Expect = 3e-24
Identities = 81/90 (90%), Gaps = 2/90 (2%)
Strand=Plus/Plus
Query 1 ATGGAAAATGCGGTGTGGAACTTGACAAAGCATTTGGATACTGTTTCAGAAGCTATTTCT 60
||||||||||| |||| ||||||||| |||||||||||||| |||||||||||||||| |
Sbjct 476 ATGGAAAATGCAGTGTCGAACTTGACCAAGCATTTGGATACCGTTTCAGAAGCTATTT-T 534
Query 61 -AATGCTAAGAAGCACCTGTGTCACCGGCT 89
|||||||||||||||||| | || |||||
Sbjct 535 GAATGCTAAGAAGCACCTGAGCCAGCGGCT 564
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 178945485681
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5