BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg347417 Length=336 Score E Sequences producing significant alignments: (Bits) Value AT3G05190.1 | Symbols: | D-aminoacid aminotransferase-like PLP... 202 2e-51 AT1G54280.1 | Symbols: | ATPase E1-E2 type family protein / ha... 113 9e-25 AT1G17500.1 | Symbols: | ATPase E1-E2 type family protein / ha... 91.6 4e-18 > AT3G05190.1 | Symbols: | D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein | chr3:1471397-1475784 FORWARD LENGTH=2147 Length=2147 Score = 202 bits (109), Expect = 2e-51 Identities = 122/128 (95%), Gaps = 1/128 (1%) Strand=Plus/Plus Query 134 AGGCTTGGGGGGAATTAGTGTCGATATACAGTGATCTCTGTCACATGGGAACACCACCAG 193 |||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 444 AGGCTT-GGGGGAATTAGTGTCGATATACAGTGATCTCTGTCAGATGGGAACACCACCAG 502 Query 194 CTGTCATCAATGCGGATGAGCTTCAGCGAGATCCCGAGACTACACTACACGGTCTTTGTG 253 | |||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 503 CAGTCATCGATGCGGATGAGCTTCAGCGAGATCCCGAGACTACACTTCGCGGTCTTTGTG 562 Query 254 ATGATTTG 261 |||||||| Sbjct 563 ATGATTTG 570 > AT1G54280.1 | Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:20262766-20267821 REVERSE LENGTH=4199 Length=4199 Score = 113 bits (61), Expect = 9e-25 Identities = 69/73 (95%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 4 ACTTTGGCAATCGGTGATGGTGAAAATGATGTTGGAATGATTCAAGAAGCTGCTATTGGT 63 ||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 3123 ACTTTGGCAATTGGTGATGGTGCAAATGATGTTGGAATGATTCAAGAAGCTGATATTGGT 3182 Query 64 GTTGGCATAAGTG 76 |||||||| |||| Sbjct 3183 GTTGGCATCAGTG 3195 > AT1G17500.1 | Symbols: | ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein | chr1:6018757-6023503 FORWARD LENGTH=3953 Length=3953 Score = 91.6 bits (49), Expect = 4e-18 Identities = 64/71 (90%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 7 TTGGCAATCGGTGATGGTGAAAATGATGTTGGAATGATTCAAGAAGCTG-CTATTGGTGT 65 |||||||| |||||||||| |||||||||||||||||||||||||||| | |||||||| Sbjct 2587 TTGGCAATAGGTGATGGTGCGAATGATGTTGGAATGATTCAAGAAGCTGAC-ATTGGTGT 2645 Query 66 TGGCATAAGTG 76 ||| || |||| Sbjct 2646 TGGAATTAGTG 2656 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15683537688 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5