BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg347421 Length=1902 Score E Sequences producing significant alignments: (Bits) Value AT3G42880.1 | Symbols: | Leucine-rich repeat protein kinase fa... 2964 0.0 AT5G20690.1 | Symbols: | Leucine-rich repeat protein kinase fa... 344 2e-93 > AT3G42880.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:14954587-14956577 FORWARD LENGTH=1902 Length=1902 Score = 2964 bits (1605), Expect = 0.0 Identities = 1803/1902 (95%), Gaps = 0/1902 (0%) Strand=Plus/Plus Query 1 ATGACTGCTGTTCTATTTCTCTGCTTCCTTCTCCTCTGTTTCTCCTTCACCCCTTCTTTG 60 ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| | Sbjct 1 ATGACTGCTGTTCTATTTCTCTGCTTCCTTCTCATCTGTTTTTCCTTCACCCCTTCTCTA 60 Query 61 CAAAACGTCAGTGAATCCGAACCGCTCGTGCGGTTCAAGAGCTCGGTGAATATAACTAAA 120 |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 61 CAAAACGTTAGTGAATCGGAACCGCTCGTGCGGTTCAAGCGCTCGGTGAATATAACTAAA 120 Query 121 GGAGATTTGAATTCATGGAGAACAGGAACCGATCCTTGCAATGGAAAATGGTTTGGGATC 180 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 121 GGAGACTTGAATTCATGGAGAACAGGAACCGATCCTTGCAATGGCAAATGGTTTGGGATC 180 Query 181 TATTGCCAAAAGGGCCAAACAGTCTCGGGCATTCACGTCACCCGGCTTGGTCTCTCCGGG 240 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 181 TATTGCCAAAAGGGTCAAACAGTTTCGGGCATTCACGTCACCCGGCTTGGTCTCTCCGGG 240 Query 241 ACCATCAACATCGAGGATTTAAAGGATCTTCCAAATCTAAGGACGATCAGGCTTGACAAC 300 ||||||||||| ||||||||||| ||||| ||||||||||| |||||||||||||||||| Sbjct 241 ACCATCAACATTGAGGATTTAAAAGATCTCCCAAATCTAAGAACGATCAGGCTTGACAAC 300 Query 301 AATCTTCTCTCAGGCCCACTCCCTCCTTTTTACAAGCTTCCAGGCTTGAAATCTCTTTTG 360 |||||||||||||| || ||||||||||||| |||||| || |||||||||||||||||| Sbjct 301 AATCTTCTCTCAGGTCCTCTCCCTCCTTTTTTCAAGCTACCTGGCTTGAAATCTCTTTTG 360 Query 361 CTCTCAAACAATAGCTTTTCCGGCGAGATTGCTGATGATTTCTTCAAGGAAACGCCACAA 420 |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||| Sbjct 361 CTCTCAAACAATAGCTTTTCTGGTGAGATTGCTGATGATTTCTTCAAAGAAACGCCACAA 420 Query 421 CTCAAGCGGGTTTTTCTCGATAACAACCGGTTATCCGGAAAAATCCCCGCTTCTTTGATG 480 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 421 CTCAAGCGGGTTTTTCTTGATAACAACCGGTTATCCGGAAAAATCCCCGCTTCTTTGATG 480 Query 481 CAACTCGCAGGTCTCGAGGAGCTTCACATGCAAGGCAACCAGTTCTCTGGTGAGATACCT 540 |||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 481 CAACTCGCAGGTCTTGAGGAGCTTCACATGCAAGGAAACCAGTTCACTGGTGAGATACCT 540 Query 541 TCTCTTACAGATGGCAACAAGGTTTTGAAATCCCTCGACCTCTCCAACAATGACCTGGAG 600 |||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||| Sbjct 541 CCTCTTACAGATGGCAACAAGGTTTTGAAATCCCTTGACCTCTCCAACAATGATCTAGAG 600 Query 601 GGAGAGATCCCAATAAGCATTTCCGAGAGGAAGAATCTAGAGATGAAATTTGAAGGAAAT 660 |||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||| ||| Sbjct 601 GGAGAGATCCCAATAACCATTTCCGACAGGAAGAATCTAGAGATGAAATTCGAAGGGAAT 660 Query 661 CAAAAGCTTTGCGGGTCACCTCTGAATATAGTATGCGATGAGAAACCTTCATCTACAGGG 720 || | |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 661 CAGAGGCTTTGCGGGTCACCTCTGAATATAGAATGCGATGAGAAACCTTCATCTACAGGG 720 Query 721 TCAGGGAATGAGAAGAATAACACTGCAAAAGCTATCTTTATGGTCATCTTGTTTCTTTTG 780 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 721 TCAGGGAATGAGAAGAATAACACTGCAAAAGCTATCTTTATGGTCATCTTGTTTCTATTG 780 Query 781 ATATTCTTGTTTGTGGTAGCGATTATTACTAGATGGAAGAAGAAGAGGCAACCCGAGTTC 840 |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 781 ATATTCTTGTTTGTGGTAGCTATTATTACAAGATGGAAGAAGAAGAGGCAACCCGAGTTC 840 Query 841 CGGATGCTCGGTAAAGACCACCTAAGCGACCAAGAGAGCGTGGAAGTCCGTGTACCAGAC 900 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 841 CGGATGCTCGGTAAAGACCACCTAAGCGACCAAGAGAGCGTGGAAGTTCGTGTACCGGAC 900 Query 901 TCGATAAAGAAGCCTATCGAGTCGAGCAAGAAGCGTAGCAACGCAGAAGGTTCCTCaaaa 960 || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 901 TCAATAAAGAAGCCTATCGACTCGAGCAAGAAGCGTAGTAACGCAGAAGGTTCCTCAAAG 960 Query 961 aaaGGTTCATCACATAACGGAAAAGGTGGAGGTGGTGGTCCAGGAAGCGGCATGGGAGAC 1020 ||||||||||| |||||||||||||||| ||| ||||||||||||||||| ||||||||| Sbjct 961 AAAGGTTCATCGCATAACGGAAAAGGTGCAGGAGGTGGTCCAGGAAGCGGAATGGGAGAC 1020 Query 1021 ATTATAATGGTCAACAGCGAGAAAGGCTCCTTTGGTTTACCCGATCTCATGAAGGCTGCA 1080 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1021 ATTATAATGGTAAACAGCGAGAAAGGCTCCTTTGGTTTACCTGATCTCATGAAGGCTGCA 1080 Query 1081 GCCGAGGTGTTAGGAAATGGTAGCCTTGGATCTGCCTATAAGGCGGTGATGGCCAACGGA 1140 || |||||| |||| ||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 1081 GCTGAGGTGCTAGGCAATGGTAGCCTTGGATCGGCCTACAAGGCGGTGATGGCCAACGGA 1140 Query 1141 TTATCCGTGGTTGTGAAAAGGATTAGGGATATGAACAAACTTGCACGTGATGCATTCGAT 1200 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1141 TTATCCGTGGTTGTGAAAAGGATTAGGGATATGAACAAACTTGCACGTGAAGCATTCGAT 1200 Query 1201 ACTGAGATGCAACGATTCGGGAAACTCCGACACCCTAACGTTCTTACCCCTCTAGCTTAT 1260 |||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 1201 ACTGAGATGCAACGGTTCGGAAAACTCCGACACCCTAACGTTCTTACCCCTTTAGCTTAT 1260 Query 1261 CACTATCGCCGTGAAGAGAAACTTGTTGTCTCTGAATACATGCCTAAAAGCAGTCTACTC 1320 |||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1261 CACTATCGTCGAGAAGAGAAGCTTGTTGTCTCTGAATACATGCCTAAAAGCAGTCTACTC 1320 Query 1321 TACGTTTTGCACGGAGATCGTGGGGTTTATCATGCGGAGCTAACTTGGGCAACAAGGTTA 1380 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 1321 TACGTTTTGCACGGAGATCGTGGGGTTTATCATTCGGAGCTAACTTGGGCAACAAGATTG 1380 Query 1381 AAGATCATCCAAGGAGTGGCACGTGGAATGGACTTCTTGCACGAGGAGTTTGCGTCCTAC 1440 |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 1381 AAGATCATACAAGGAGTGGCACGAGGAATGGACTTCTTGCATGAGGAGTTTGCGTCCTAC 1440 Query 1441 GAGCTCCCACATGGAAATCTCAAATCCAGCAATGTTCTATTAAGTGAAACCTATGAGCCA 1500 || || |||||||||||||||||||| ||||| |||||| |||||||||||||||||||| Sbjct 1441 GATCTTCCACATGGAAATCTCAAATCTAGCAACGTTCTACTAAGTGAAACCTATGAGCCA 1500 Query 1501 TTGATTAGCGATTACGCGTTCCTCCCGCTTCTTCAGCCTAACAACGCCTCACATGCTTTA 1560 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1501 TTGATTAGCGATTACGCGTTCCTCCCGCTTCTTCAGCCTAACAACGCCTCACAAGCTTTA 1560 Query 1561 TTCGCGTTCAAATCCCCTGAGTTCGTACAAAACCAGCAGATTTCACCAAAATCAGACGTC 1620 ||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||| Sbjct 1561 TTCGCGTTCAAATCCCCCGAGTTTGTACAAAACCAGCAGGTTTCACCAAAATCAGACGTC 1620 Query 1621 TATTGCCTTGGAATTATCGTTCTTGAGGTCATGACGGGGAAGTTCCCATCTCAATACCTA 1680 |||||||||||||| |||||||| ||||||||||||||||||||||| ||||| |||||| Sbjct 1621 TATTGCCTTGGAATAATCGTTCTCGAGGTCATGACGGGGAAGTTCCCGTCTCAGTACCTA 1680 Query 1681 AATAATGGTAAAGGGGGGACGGATATAGTTGAATGGGTGCAATCTTCAATCGCACAACAT 1740 |||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1681 AATACTGGTAAAGGAGGGACGGATATAGTCGAATGGGTGCAATCTTCAATCGCACAACAT 1740 Query 1741 AAAGAAGAAGAGCTGATAGATCCAGAGATAGCGAGTAATACCGATTCGACAAAACAAATG 1800 |||||||||||||| |||||||| ||||| ||||||||||| ||||||| |||||||||| Sbjct 1741 AAAGAAGAAGAGCTTATAGATCCCGAGATTGCGAGTAATACTGATTCGATAAAACAAATG 1800 Query 1801 GTGGAATTGTTGCGGATCGGGGCTTCTTGTATCGCAAGTAACCCTAATGAAAGACAAAAC 1860 || ||||||||||||||||||||| |||||||||||||||||||||| || ||||||||| Sbjct 1801 GTTGAATTGTTGCGGATCGGGGCTGCTTGTATCGCAAGTAACCCTAACGAGAGACAAAAC 1860 Query 1861 ATGAAGGAAATTGTTAGAAGGATAGAAAAAGTAACACTTTGA 1902 |||||||| |||||||||||||||||| ||||||||||||| Sbjct 1861 ATGAAGGAGATTGTTAGAAGGATAGAACGAGTAACACTTTGA 1902 > AT5G20690.1 | Symbols: | Leucine-rich repeat protein kinase family protein | chr5:7002453-7004551 FORWARD LENGTH=1980 Length=1980 Score = 344 bits (186), Expect = 2e-93 Identities = 402/506 (79%), Gaps = 16/506 (3%) Strand=Plus/Plus Query 16 TTTCT-CTGCTTCCTTCTCCTCTGTTTCTCCTTCACCCCTTCTTTGCAAAACGTCAGTGA 74 ||||| || | |||| ||| | | |||||| || ||||||||||||| | || || || Sbjct 31 TTTCTCCT-CATCCTCCTCTTATCTTTCTCAATCTCCCCTTCTTTGCAGTATGTGAGCGA 89 Query 75 ATCCGAACCGCTCGTGCGGTTCAAGAGCTCGGTGAATATAACTAAAGGAGATTTGAATTC 134 ||||||||||| ||||||||||| | ||||||||| ||||| ||||| || | ||||| Sbjct 90 GTCCGAACCGCTTGTGCGGTTCAAAAACTCGGTGAAGATAACCAAAGGGGACCTAAATTC 149 Query 135 ATGGAGA-ACAGGAACCGATCCTTGCAATGGAAAATGGTTTGGGATCTATTGCCAAAAGG 193 ||||||| | ||| || |||||||||| ||| |||||||||||||||||||||||||||| Sbjct 150 ATGGAGAGA-AGGGACAGATCCTTGCAGTGGGAAATGGTTTGGGATCTATTGCCAAAAGG 208 Query 194 GCCAAACAGTCTCGGGCATTCACGTCACCCGGCTTGGTCTCTCCGGGACCATCAACATCG 253 | | ||||||||| |||||||||||||| || || |||||||| || ||||||| | | | Sbjct 209 GTCTAACAGTCTCAGGCATTCACGTCACACGTCTAGGTCTCTCAGGAACCATCACCGTGG 268 Query 254 AGGATTTAAAGGATCTTCCAAATCTAAGGACGATCAGGCTTGACAACAATCTTCTCTCAG 313 | |||||||||||||| |||||||||| ||||||||||||||||||||| || ||||| | Sbjct 269 ATGATTTAAAGGATCTCCCAAATCTAAAGACGATCAGGCTTGACAACAACCTCCTCTCCG 328 Query 314 GCCCACTCCCTCCTTT-TT-ACAAGCTTCCA-GGCTTGAAATCTCTTTTGCTCTCAAACA 370 | || ||||| | ||| || | || || || ||| | |||||||| ||||||| |||| Sbjct 329 GTCCTCTCCCGCATTTCTTTA-AA-CT-CCGTGGCCTAAAATCTCTCATGCTCTCTAACA 385 Query 371 ATAGCTTTTCCGGCGAGATT-GCTGATGATTTCTTCAAGGAAACGCCACAA-CTCAAGCG 428 | ||||| ||||| ||||| | ||| ||||| |||||||| | | || || |||||||| Sbjct 386 ACAGCTTCTCCGGAGAGATCCG-TGACGATTTTTTCAAGGACATGTCA-AAGCTCAAGCG 443 Query 429 GGTTTTTCTCGATAACAACCGGTTATCCGGAAAAATCCCCGCTTCT-TTGATGCAACTCG 487 | ||||| ||| | ||| ||| |||| ||||| | || || | ||| ||| Sbjct 444 ACTATTTCTTGATCATAACAAGTTCGAGGGAAGTATCCCTTCCTCCATT-ACGCAGCTCC 502 Query 488 CAGGTCTCGAGGAGCTTCACATGCAA 513 | ||||||||||||||||||||| Sbjct 503 CTCAACTCGAGGAGCTTCACATGCAA 528 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 94176222420 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5