BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg347545
Length=4332
Score E
Sequences producing significant alignments: (Bits) Value
AT3G44690.1 | Symbols: | unknown protein; Has 30201 Blast hits... 2313 0.0
AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 | ch... 1304 0.0
AT3G44490.1 | Symbols: hda17 | histone deacetylase 17 | chr3:16... 741 0.0
AT3G44660.1 | Symbols: hda10 | histone deacetylase 10 | chr3:16... 641 0.0
> AT3G44690.1 | Symbols: | unknown protein; Has 30201 Blast hits
to 17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr3:16230685-16234215
REVERSE LENGTH=3531
Length=3531
Score = 2313 bits (1252), Expect = 0.0
Identities = 1588/1751 (91%), Gaps = 20/1751 (1%)
Strand=Plus/Plus
Query 1298 ATCCTGATGTCAACAGATTAGATATTCTGGTAGACCGGGAACGGGAAGATGCTAGAGGTT 1357
|||| |||||||||| || ||||| ||||| | | || ||||||||| | ||||||
Sbjct 1766 ATCCCGATGTCAACAAATCAGATACTCTGG-A-A----GACCGGGAAGATTCCAGAGGTC 1819
Query 1358 TAAGGTATAGAGGAGGGTCCTTAAATGATAGGATGGAAACATATTTACCTTGTGAAAGTC 1417
|||||||||||||||||||||| ||||||| | |||| |||| | | |||||||| |
Sbjct 1820 TAAGGTATAGAGGAGGGTCCTTGAATGATAAAAAGGAAGCATACATGCAATGTGAAAGAC 1879
Query 1418 AGCA-ACTCTTAAATGATCATGAAACTAACTCCTATGGCATGATGTATCCCGATGTCAAC 1476
|| | |||| |||||||| |||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1880 AG-AGACTCCTAAATGATTATGAAACTAACTCCTATGGCATGATGCATCCCCATGTCAAC 1938
Query 1477 AAATCAGATATTCTGGTAGACCGGGAAGATTCCAGAGGTCTAAGGTATAGAGGAGTGTCC 1536
|||||||||| ||||||||||| |||||| |||||||| |||||||||||||| |||
Sbjct 1939 AAATCAGATACTCTGGTAGACCATGAAGATGGCAGAGGTCGGAGGTATAGAGGAGTTTCC 1998
Query 1537 TTGAATGATAAAAAGGAAGCATACTTGCAATGTGAAAGCCAGCGACGCCTAAATGATCAT 1596
|||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||||
Sbjct 1999 TTGAATGATAAAAAGGAAGCATACTTGCAATGTGAAAGGCAGCGACTCCTAAACGATCAT 2058
Query 1597 GAAACTGACTCTTATGTCACGATGCATCCCGATGTCAACAAATCAGATATTCTGGTAGCC 1656
|||||||||||||| |||| || ||||||||||||||||||||||||||||||||||| |
Sbjct 2059 GAAACTGACTCTTACGTCATGAGGCATCCCGATGTCAACAAATCAGATATTCTGGTAGAC 2118
Query 1657 CATGAAGATGCCAGAGGTTGGAAGTATATAGGAGTGCCCTTAAATGATAGAAAGAAAGCA 1716
|||||||||||||||||| ||| |||| ||||||| |||| ||||||| |||| | |||
Sbjct 2119 CATGAAGATGCCAGAGGTCGGAGGTATGGAGGAGTGTCCTTGAATGATAAAAAGGACGCA 2178
Query 1717 TACTTGCAACGTGAAAGCCAACAACTCCTAAACGATTATGAAACTGACTCGTATGTCATG 1776
||||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2179 TACTTGCAATGTGAAAACCAGCAACTCCTAAACGATTATGAAACTGACTCTTATGTCATG 2238
Query 1777 ATGCCTCCTGATGTCAACAGATCAGATATTCTAGTAGACCATGAAGATGCCAGAGGTCTA 1836
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2239 ATGCCTCCTGATGTCAACAGATCAGATATTCTAGTAGACCATGAAGATGCAAGAGGTCTA 2298
Query 1837 AGGTATAAAGGAGTATCCCTAAATGATCGAAAGGAAGCATATTTTCAATGTGAAAGCCAG 1896
||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct 2299 AGGTATAGAGGAGTATCCTTAAATGATCGAAAGGAAGCATATTTTCAAAGTGAAAGCCAG 2358
Query 1897 CAACGCCTAAAAGATCATGAAACTAACTCTTATGGCATGATGCATCCCAATCTCAATAAA 1956
|||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 2359 CAACTCCTAAAAGATCATGAAACTAACTCTTTTGGCATGATGCATCCCAGTCTCAATAAA 2418
Query 1957 TCAGATATTCTTATAGACCGGGAAGATGCCAGAGCTCTTGAGC-TAAGAAGAGTATCCTT 2015
|||||||||||| || || ||||||| |||||||||||||||| || |||||| ||||||
Sbjct 2419 TCAGATATTCTTGTAAACGGGGAAGAAGCCAGAGCTCTTGAGCGTA-GAAGAGGATCCTT 2477
Query 2016 CGATGATGGAAAGGAATCATACATGGATTATAGAAGGGGGGATGCATATCCGCGTTACAA 2075
|||||||||| ||||||||||||||||||||| ||||||||||||||||| || |||| |
Sbjct 2478 CGATGATGGAGAGGAATCATACATGGATTATAAAAGGGGGGATGCATATCTGCATTACGA 2537
Query 2076 AAGCCAAC---TGAAGGAAGATTATGACTATGGCATTGATGACAAGATTTATCGTGATGT 2132
|||||||| | ||| ||||| ||||||||||||||||||||| ||| |||||||||||
Sbjct 2538 AAGCCAACAACTTAAGAAAGATCATGACTATGGCATTGATGACAGGATATATCGTGATGT 2597
Query 2133 CAACTCTTCAGATATTATTGTAAACCATGGAGATGCCAACGCACTAGAGGTTAGAAGAGT 2192
|||||| ||||||||||| ||| |||||||||||||||| || |||||| |||| |||||
Sbjct 2598 CAACTCGTCAGATATTATAGTAGACCATGGAGATGCCAAGGCGCTAGAGCTTAGGAGAGT 2657
Query 2193 AGCCTTCCGTGATAGAAATGAAGCATATTTGGATAATGAAAGCAAGGATGTTTATCAGCA 2252
||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2658 AGCCTTCATTGATAGAAATGAAGCGTATTTGGATAATGAAAGCAAGGATGTTTATCAGCA 2717
Query 2253 TTACAAAAAACAACCACTGAAGGACTATGACTCTGGAATTGATGAAAGGATGTATCCTGC 2312
|||||| ||||||| ||||||| |||| |||||||| |||||||| ||||||||||||||
Sbjct 2718 TTACAATAAACAACAACTGAAGTACTACGACTCTGGCATTGATGAGAGGATGTATCCTGC 2777
Query 2313 TGTCACCAAATCAGAGACTGTGGTAGACCAAGGAGGTGCTAGAGCTCTAGAGCGTAGAGG 2372
|||||||||| |||||| ||||| | || |||||||||||||||||||||||||| |||
Sbjct 2778 TGTCACCAAAGCAGAGATTGTGG-A--CCGAGGAGGTGCTAGAGCTCTAGAGCGTAAAGG 2834
Query 2373 ATTATCCTCGAATGATGAAAGGGGAGCCTATTTGCACTATGAAAGCCAGAAAATCCTAAG 2432
| | ||||||||||| | ||||| ||||||||||| ||||||||||||| || |||||||
Sbjct 2835 AATGTCCTCGAATGACGGAAGGGAAGCCTATTTGCCCTATGAAAGCCAGCAACTCCTAAG 2894
Query 2433 GGATCATGAAATTGATTCGTATGGGATGATGCATCCTGACGTCAGTATATCATCAGCTGG 2492
|||||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||
Sbjct 2895 AGATCATGAAATTGATTCGTATGGGGTGATGCATCCTGATGTCAGTAGATCATCAGCTGG 2954
Query 2493 CAAGCAAGATGAGGAAACTCTTCGAGGCAGGAGATATCTTTATGATGGTCGAGATCAAGT 2552
|||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||
Sbjct 2955 CAAGCAAGATGAGGAAGCTCTTCGAGGCAGGAGATATCTTTTTGATGACCGAGATCAAGT 3014
Query 2553 CTACTTGGATGATGAGCGCTTGCAACGACGAAATGGTGGTCATGTTCAAGTTCATGCCAA 2612
|||||||||||||||||| ||||||||||| ||||||||| ||||| ||||| |||||||
Sbjct 3015 CTACTTGGATGATGAGCGTTTGCAACGACGTAATGGTGGTGATGTTAAAGTTTATGCCAA 3074
Query 2613 TATGAGATATCCAGATGGTAGACAAGAGGTTTATCATTCAAATGATCCAATACTGCGTAC 2672
||||||||||| ||||||||||||||||||||||||||| |||||| |||| |||||||
Sbjct 3075 TATGAGATATCAAGATGGTAGACAAGAGGTTTATCATTCGAATGATTCAATTTTGCGTAC 3134
Query 2673 AAGAGATGATTATGGTCTTAGAGACGATGCAAGTGAGGTTATATATGAGAATATGGCTTA 2732
||||||||||||||||||||||||| | |||||||||||||| ||||||||||| ||||
Sbjct 3135 AAGAGATGATTATGGTCTTAGAGACAACGCAAGTGAGGTTATGCATGAGAATATGCCTTA 3194
Query 2733 TGATTACGACTAC-GGTGATGCTAAGCAATCAAGAATGTCTTATGAGAAGGAAGATAGGG 2791
||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||
Sbjct 3195 TGATTACAACTACAGG-GATGCTAAGCAATCAAGAATGTCTTATGAGAAGGCAGATAGTA 3253
Query 2792 AGAGGCTCCGCGAACGTGAAGTAGCGTATGATTACAGAGACAAGCTAGGGAACTATGCAG 2851
| ||| |||| |||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3254 AAAGGTTCCGTGAACATGAAGTAGCATATGATTACAGAGACAAGCTAGGGAACTATGCAG 3313
Query 2852 TGGATGGAGGAACAAGCAAAGACCAATTCCGATACTTAACTGATGAAAGGAATTTTGGTA 2911
|||||||||||| ||||| ||| ||||||||||||| | ||||||||||||||| |||||
Sbjct 3314 TGGATGGAGGAATAAGCAGAGAACAATTCCGATACTCAGCTGATGAAAGGAATTCTGGTA 3373
Query 2912 ACGTTGATCACACATCAACTCCG-CGCCGTCGATTATCTGCAAAAGAGCGGTTAGGTGGG 2970
| ||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||
Sbjct 3374 ATGTTGATCACACATCAACTC-GACGCCGTCGATTATCTGCAAAGGAGCGGTTAGGTGGG 3432
Query 2971 CGTGTCGAAGAAGATTCACGTGTTCATGTGAAACATAGACTGCATCAGGTTAGAAACCCA 3030
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3433 CGTGTTGAAGAAGATTCACGTGTTCATGTGAAACATAGACTGCATCAGGTTAGAAACCCA 3492
Query 3031 AAACTAAAAGG 3041
|| ||||||||
Sbjct 3493 AACCTAAAAGG 3503
Score = 2017 bits (1092), Expect = 0.0
Identities = 1415/1571 (90%), Gaps = 21/1571 (1%)
Strand=Plus/Plus
Query 474 TAAG-CGTGGAGACCATGATTCACCAATTGTGAGCAAGTGTGGCAAAGAGATAGTGGATG 532
|||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||
Sbjct 782 TAAGTCGTGGAGACCATGATTCACCAGTTGTGAGCAGGTGTGTCAAAGAGATAGTGGATG 841
Query 533 AATCTCGCAATCATTATCATATAGGCTCTGATATAGCAATGAGAGAGTTTCCCAGTGTTA 592
|| |||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 842 AAGCTCGGGATAATTATCATATAGGCTCTGATATAGCAATGAGAGAGTTTCCCAGTGTTA 901
Query 593 GGCATGAGGTCAATAATGTGGCTAGAGAGAGTGATCTTCTTATGCAGACAAGAGGATCTT 652
|||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||
Sbjct 902 GGCATGAGGTCAATAATGTGGCTAGAGAGAATGATCTTTTTATGCAGAGGAGAGGATCTT 961
Query 653 TATCAAAATCCCATGTCCGTGTTTCAAATATAGCTGATGTTGATGCGGCCGATACCCATC 712
||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 962 TATCAAAATCCCATGTCTGTGGTTCAAATATAGCTGATGTTGATGCGGCCGATACCCATC 1021
Query 713 TTGATTTTTGCAGGAAAGAGAGGATGGCTGACCATTATGAGTCTGTGAAGGAAGATTATC 772
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1022 TTGAGTTTAGCAGGAAAGAGAGGATGGCTGACCATTATGAGTCTGTGAAGGAAGATTATC 1081
Query 773 CTTTTGTGGAGTTGGGATCAAGAGTGGTGAATGAACGAGATGATAAGGATGATCACTACA 832
||||||||||||||||||||||||||||| |||||| | | |||||||||||||
Sbjct 1082 CTTTTGTGGAGTTGGGATCAAGAGTGGTGGATGAAC-----G---A-GATGATCACTACA 1132
Query 833 GGAACTTCTGTAACGAAGAAAGGAAGGTTGTTTATTTGGATAACAAATGTCAACCACTGA 892
|||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct 1133 GGAACTTCCGTAACGAAGAAAGAAAGGTTGTTTATTTGGATAACAAATGTCAAGTACTGA 1192
Query 893 GAAAGGATTATCAATGTGATGGTGTTGACAGTATGAAGAATCTTGATTTCTGTGAACCAT 952
|||||||||||| || ||||||||||||||||| |||||||||||||||| |||||||||
Sbjct 1193 GAAAGGATTATCTATATGATGGTGTTGACAGTAAGAAGAATCTTGATTTCAGTGAACCAT 1252
Query 953 ATGCTGTCGTAGATCAAGGTGATAACGGTTCACAGCGCATAA-ATCGCTGCTTAAATAAA 1011
||||||| ||||||| || |||||| | ||||||| |||||| | || ||||||||||||
Sbjct 1253 ATGCTGTAGTAGATCGAGATGATAAAGCTTCACAGAGCATAACA-CGTTGCTTAAATAAA 1311
Query 1012 GAAAGGGAAGCATATTTGGATAATGAGAGAAATGCTGTTTTTTCAGATGATAAAAGACGG 1071
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1312 GAAAGGGAAGCATATTTGGATAATGAGAGAAATGCTGTTTTTTCAGATGATAAAAGACAG 1371
Query 1072 GAACTGAGAAACGAGTATCACTGTGGCAATGACGGTAGGATGCATTCTGAGGTAGATAGG 1131
||||||||||||||||||||| ||||||||| |||||||| |||||||| ||||||| |
Sbjct 1372 GAACTGAGAAACGAGTATCACCCTGGCAATGATGGTAGGATACATTCTGATGTAGATATG 1431
Query 1132 GCAGATATTTTGGTAGATCAGGATGGAAGAGGAGTGCAGCTTCAACGA-GTATGCTTAAA 1190
||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1432 GCAGATATTGTGGTAGATCAGGATGGAAGAGGAGTGCAGCTTCAACGACG-ATGCTTAAA 1490
Query 1191 CAAAGGAAAGGCAGCATACTTGGATAATGAAAGGAAGGATGTTTATCTGAATTACAAAAG 1250
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1491 CAAAGGAAAGGCAGCATACTTGGATAATGAAAGGAAGGATGTTTATCTGAATTACAAAAT 1550
Query 1251 CCGGCAACTGGAAAAAGATTATGACTCTCGCTCTGATGCTAGGATTTATCCTGATG-T-- 1307
|| |||||||| |||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1551 CCAACAACTGGAGAAAGATTATGACTCTCGCTCTGATGCTAAGATTTATCCTGATGATGT 1610
Query 1308 CAACAGATTAGATATTCTGGTAGACCGGGAACGGGAAGATGCTAGAGGTTTAAGGTATAG 1367
|||||||||||||||||| | |||| ||||||||||| || | |||||| ||||||||||
Sbjct 1611 CAACAGATTAGATATTCTAGCAGACTGGGAACGGGAAAATTCCAGAGGTCTAAGGTATAG 1670
Query 1368 AGGAGGGTCCTTAAATGATAGGATGGAAACATATTTACCTTGTGAAAGTCAGCAACTCTT 1427
||||||||||||||||||||| | |||| | || || | |||||||| ||||||||| |
Sbjct 1671 AGGAGGGTCCTTAAATGATAGAAGGGAAGCTTACTTGCAATGTGAAAGCCAGCAACTCCT 1730
Query 1428 AAATGATCATGAAACTAACTCCTATGGCATGATGTATCCCGATGTCAACAAATCAGATAT 1487
||||||| |||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 1731 AAATGATTATGAAACTAACTCCTATGGCATAATGCATCCCGATGTCAACAAATCAGATAC 1790
Query 1488 TCTGGTAGACCGGGAAGATTCCAGAGGTCTAAGGTATAGAGGAGTGTCCTTGAATGATAA 1547
||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1791 TCTGGAAGACCGGGAAGATTCCAGAGGTCTAAGGTATAGAGGAGGGTCCTTGAATGATAA 1850
Query 1548 AAAGGAAGCATACTTGCAATGTGAAAGCCAGCGACGCCTAAATGATCATGAAACTGACTC 1607
||||||||||||| ||||||||||||| ||| ||| |||||||||| |||||||| ||||
Sbjct 1851 AAAGGAAGCATACATGCAATGTGAAAGACAGAGACTCCTAAATGATTATGAAACTAACTC 1910
Query 1608 TTATGTCACGATGCATCCCGATGTCAACAAATCAGATATTCTGGTAGCCCATGAAGATGC 1667
|||| || |||||||||| |||||||||||||||||| |||||||| |||||||||||
Sbjct 1911 CTATGGCATGATGCATCCCCATGTCAACAAATCAGATACTCTGGTAGACCATGAAGATGG 1970
Query 1668 CAGAGGTTGGAAGTATATAGGAGTGCCCTTAAATGATAGAAAGAAAGCATACTTGCAACG 1727
||||||| ||| ||||| |||||| |||| ||||||| |||| |||||||||||||| |
Sbjct 1971 CAGAGGTCGGAGGTATAGAGGAGTTTCCTTGAATGATAAAAAGGAAGCATACTTGCAATG 2030
Query 1728 TGAAAGCCAACAACTCCTAAACGATTATGAAACTGACTCGTATGTCATGATGCCTCCTGA 1787
|||||| || | ||||||||||||| ||||||||||||| || ||||||| || ||| ||
Sbjct 2031 TGAAAGGCAGCGACTCCTAAACGATCATGAAACTGACTCTTACGTCATGAGGCATCCCGA 2090
Query 1788 TGTCAACAGATCAGATATTCTAGTAGACCATGAAGATGCCAGAGGTCTAAGGTATAAAGG 1847
|||||||| |||||||||||| ||||||||||||||||||||||||| |||||| |||
Sbjct 2091 TGTCAACAAATCAGATATTCTGGTAGACCATGAAGATGCCAGAGGTCGGAGGTATGGAGG 2150
Query 1848 AGTATCCCTAAATGATCGAAAGGAAGCATATTTTCAATGTGAAAGCCAGCAACGCCTAAA 1907
||| ||| | |||||| |||||| ||||| || |||||||||| |||||||| ||||||
Sbjct 2151 AGTGTCCTTGAATGATAAAAAGGACGCATACTTGCAATGTGAAAACCAGCAACTCCTAAA 2210
Query 1908 AGATCATGAAACTAACTCTTATGGCATGATGCATCCCAATCTCAATAAATCAGATATTCT 1967
||| |||||||| ||||||||| |||||||| ||| || |||| | ||||||||||||
Sbjct 2211 CGATTATGAAACTGACTCTTATGTCATGATGCCTCCTGATGTCAACAGATCAGATATTCT 2270
Query 1968 TA-TAGACCGGGAAGATGCCAGAGCTCTTGAGCTA-AGAAGAGTATCCTTCGATGATGGA 2025
| |||||| |||||||| |||| ||| || || ||| |||||||||| ||||| ||
Sbjct 2271 -AGTAGACCATGAAGATGCAAGAGGTCTA-AGGTATAGAGGAGTATCCTTAAATGATCGA 2328
Query 2026 AAGGAATCATA 2036
|||||| ||||
Sbjct 2329 AAGGAAGCATA 2339
Score = 586 bits (317), Expect = 6e-166
Identities = 397/435 (91%), Gaps = 7/435 (2%)
Strand=Plus/Plus
Query 1 ATGAGAGAGCGGATTCGCGATTCTCTGCCTCGACGATCGTCTTCACCTTCTCCGACGAGT 60
||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||
Sbjct 7 ATGAGAGAGCGGATTCGCGATTCTCTGCCTCAACGATTGTCGTCACCTTCTCCGACGAGT 66
Query 61 GACCGTGACAGGAACGAGTCTAGCGTGATTAAACCCGGCGATGTTGCAAACCGTTCCGAT 120
||||||||| |||||||||| ||| ||||||||| |||||||||| ||| ||||||||||
Sbjct 67 GACCGTGACGGGAACGAGTCGAGCATGATTAAACTCGGCGATGTTTCAAGCCGTTCCGAT 126
Query 121 CAAATCGATGTGGTTTCTCACGGAGTCGAGGACCGGGAACAAGATATTGATGGTA-CACG 179
|||||||| ||||||||||| ||||||| || | | |||| |||||||| || | | ||
Sbjct 127 AAAATCGATATGGTTTCTCACAGAGTCGACGAACAGAAACACGATATTGACGGAATC-CG 185
Query 180 G-AGAGATTCTGATCTGTACGACGTAGAGATTCAAAGACGCACTGGATTTTCTAATAAGG 238
| | |||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||
Sbjct 186 GCA-AGATTCTGATCTGTACGATGTAGAGATTCAAAGAAGCACTGAATTTTCTAATAAGG 244
Query 239 ACCGACGAGAAGAAGAAGATAGAGACGATGAACGTTATGTGAAACATTTTCATCTTCAGG 298
||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||
Sbjct 245 ACCGACGAGAAGAAGAAGAGAGAGACGATGAACGTTATACGAAACATTATCATCTTCAGG 304
Query 299 AAGATTCCGGCAAACGTTATGTGGAATCATCGAGATTCATCACATCGCAT-A--ATCCAT 355
|||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||
Sbjct 305 AAGATTCCGGCAAACGTTATCCGGAATCATCGAGATTCATCACATCGCATGATCATCCAT 364
Query 356 TGAGATTGAGTGACGAATCTAAGCCCTCTAGATTCATCACATCGCATGATGATGAGTATT 415
||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 365 CGAGATTGAGCGACGAACCTAAGCCCTCTAGATTCATCACATCGCATGATGATGAGTATT 424
Query 416 CTCCATCTCATGGGA 430
|||||||||||||||
Sbjct 425 CTCCATCTCATGGGA 439
Score = 527 bits (285), Expect = 4e-148
Identities = 485/581 (83%), Gaps = 16/581 (3%)
Strand=Plus/Plus
Query 1468 GATGTCAACAAATCAGATATTCT-G--G--T-AGACCGGGAAGATTCCAGAGGTCTAAGG 1521
|||||||||| || ||||||||| | | | || |||||| |||||||||||||||||
Sbjct 1606 GATGTCAACAGATTAGATATTCTAGCAGACTGGGAACGGGAAAATTCCAGAGGTCTAAGG 1665
Query 1522 TATAGAGGAGTGTCCTTGAATGATAAAAAGGAAGCATACTTGCAATGTGAAAGCCAGCGA 1581
|||||||||| |||||| ||||||| || |||||| |||||||||||||||||||||| |
Sbjct 1666 TATAGAGGAGGGTCCTTAAATGATAGAAGGGAAGCTTACTTGCAATGTGAAAGCCAGCAA 1725
Query 1582 CGCCTAAATGATCATGAAACTGACTCTTATGTCACGATGCATCCCGATGTCAACAAATCA 1641
| |||||||||| |||||||| |||| |||| || ||||||||||||||||||||||||
Sbjct 1726 CTCCTAAATGATTATGAAACTAACTCCTATGGCATAATGCATCCCGATGTCAACAAATCA 1785
Query 1642 GATATTCTGGTAGCCCATGAAGATGCCAGAGGT-TGGAAG-TATATAGGAGTGCCCTTAA 1699
|||| ||||| || || |||||| |||||||| | ||| |||| ||||| | |||| |
Sbjct 1786 GATACTCTGGAAGACCGGGAAGATTCCAGAGGTCT--AAGGTATAGAGGAGGGTCCTTGA 1843
Query 1700 ATGATAGAAAGAAAGCATACTTGCAACGTGAAAGCCA-ACAACTCCTAAACGATTATGAA 1758
|||||| |||| |||||||| ||||| ||||||| || | | |||||||| |||||||||
Sbjct 1844 ATGATAAAAAGGAAGCATACATGCAATGTGAAAGACAGAGA-CTCCTAAATGATTATGAA 1902
Query 1759 ACTGACTCGTATGTCATGATGCCTCCTGATGTCAACAGATCAGATATTCTAGTAGACCAT 1818
||| |||| |||| |||||||| ||| ||||||||| |||||||| ||| |||||||||
Sbjct 1903 ACTAACTCCTATGGCATGATGCATCCCCATGTCAACAAATCAGATACTCTGGTAGACCAT 1962
Query 1819 GAAGATGCCAGAGGTCTAAGGTATAAAGGAGTATCCCTAAATGATCGAAAGGAAGCATAT 1878
||||||| |||||||| ||||||| |||||| ||| | |||||| ||||||||||||
Sbjct 1963 GAAGATGGCAGAGGTCGGAGGTATAGAGGAGTTTCCTTGAATGATAAAAAGGAAGCATAC 2022
Query 1879 TTTCAATGTGAAAGCCAGCAACGCCTAAAAGATCATGAAACTAACTCTTATGGCATGATG 1938
|| ||||||||||| |||| || |||||| |||||||||||| ||||||| | ||||| |
Sbjct 2023 TTGCAATGTGAAAGGCAGCGACTCCTAAACGATCATGAAACTGACTCTTACGTCATGAGG 2082
Query 1939 CATCCCAATCTCAATAAATCAGATATTCTTATAGACCGGGAAGATGCCAGAGCTCTTGAG 1998
|||||| || |||| |||||||||||||| |||||| ||||||||||||| || |||
Sbjct 2083 CATCCCGATGTCAACAAATCAGATATTCTGGTAGACCATGAAGATGCCAGAGGTCG-GAG 2141
Query 1999 CTAAGAAG-AGTATCCTTCGA-TGATGGAAAGGAATCATAC 2037
|| | || ||| ||||| || |||| |||||| |||||
Sbjct 2142 GTATGGAGGAGTGTCCTT-GAATGATAAAAAGGACGCATAC 2181
Score = 496 bits (268), Expect = 1e-138
Identities = 479/580 (83%), Gaps = 18/580 (3%)
Strand=Plus/Plus
Query 1304 ATGTCAACAGATTAGATATTCTGGTAGACCGGGAACGGGAAGAT-GCTAGAGGTTTAAGG 1362
||||||||| || ||||| ||||||||||| | |||||| || |||||| |||
Sbjct 1931 ATGTCAACAAATCAGATACTCTGGTAGACC----A--TGAAGATGGC-AGAGGTCGGAGG 1983
Query 1363 TATAGAGGAGGGTCCTTAAATGATAGGATGGAAACATATTTACCTTGTGAAAGTCAGCAA 1422
|||||||||| ||||| ||||||| | |||| |||| || | |||||||| |||| |
Sbjct 1984 TATAGAGGAGTTTCCTTGAATGATAAAAAGGAAGCATACTTGCAATGTGAAAGGCAGCGA 2043
Query 1423 CTCTTAAATGATCATGAAACTAACTCCTATGGCATGATGTATCCCGATGTCAACAAATCA 1482
||| |||| |||||||||||| |||| || | ||||| | ||||||||||||||||||||
Sbjct 2044 CTCCTAAACGATCATGAAACTGACTCTTACGTCATGAGGCATCCCGATGTCAACAAATCA 2103
Query 1483 GATATTCTGGTAGACCGGGAAGATTCCAGAGGTCTAAGGTATAGAGGAGTGTCCTTGAAT 1542
|||||||||||||||| |||||| ||||||||| |||||| |||||||||||||||||
Sbjct 2104 GATATTCTGGTAGACCATGAAGATGCCAGAGGTCGGAGGTATGGAGGAGTGTCCTTGAAT 2163
Query 1543 GATAAAAAGGAAGCATACTTGCAATGTGAAAGCCAGCGACGCCTAAATGATCATGAAACT 1602
||||||||||| ||||||||||||||||||| ||||| || |||||| ||| ||||||||
Sbjct 2164 GATAAAAAGGACGCATACTTGCAATGTGAAAACCAGCAACTCCTAAACGATTATGAAACT 2223
Query 1603 GACTCTTATGTCACGATGCATCCCGATGTCAACAAATCAGATATTCTGGTAGCCCATGAA 1662
||||||||||||| ||||| ||| |||||||||| |||||||||||| |||| |||||||
Sbjct 2224 GACTCTTATGTCATGATGCCTCCTGATGTCAACAGATCAGATATTCTAGTAGACCATGAA 2283
Query 1663 GATGCCAGAGGT-TGGAAG-TATATAGGAGTGCCCTTAAATGATAGAAAGAAAGCATACT 1720
||||| |||||| | ||| |||| |||||| ||||||||||| ||||| ||||||| |
Sbjct 2284 GATGCAAGAGGTCT--AAGGTATAGAGGAGTATCCTTAAATGATCGAAAGGAAGCATATT 2341
Query 1721 TGCAACGTGAAAGCCAACAACTCCTAAACGATTATGAAACTGACTCGTATGTCATGATGC 1780
| ||| |||||||||| ||||||||||| ||| |||||||| |||| | || ||||||||
Sbjct 2342 TTCAAAGTGAAAGCCAGCAACTCCTAAAAGATCATGAAACTAACTCTTTTGGCATGATGC 2401
Query 1781 CTCCT-GATGTCAACAGATCAGATATTCTAGTAGACCATGAAGATGCCAGAGGTCTA-AG 1838
||| | | |||| | |||||||||||| ||| || ||||| ||||||| ||| ||
Sbjct 2402 ATCCCAG-TCTCAATAAATCAGATATTCTTGTAAACGGGGAAGAAGCCAGAGCTCTTGAG 2460
Query 1839 -GTATAAAGGAGTATCCCTAAATGATCGAAAGGAAGCATA 1877
||| || | || |||| | ||||| || ||||| ||||
Sbjct 2461 CGTAGAA-G-AGGATCCTTCGATGATGGAGAGGAATCATA 2498
> AT3G44680.1 | Symbols: HDA9, HDA09 | histone deacetylase 9 |
chr3:16226556-16229954 REVERSE LENGTH=1696
Length=1696
Score = 1304 bits (706), Expect = 0.0
Identities = 764/793 (96%), Gaps = 0/793 (0%)
Strand=Plus/Plus
Query 3040 GGGGATGTGGGGAGCGTGTATTTTGGTCCGAATCACCCGATGAAACCTCACAGGCTTTGT 3099
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 GGGGATGTGGGGAGTGTCTATTTTGGTCCGAATCACCCGATGAAACCTCACAGGCTTTGT 298
Query 3100 ATGACCCATCATCTAATTCTTGCATATGGCCTCCATAGCAAGATGGAAGTTTATCGTCCA 3159
|||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||
Sbjct 299 ATGACCCATCATCTTATCCTTGCATATGGCCTGCATAGCAAGATGGAAGTTTATCGTCCA 358
Query 3160 CACAAGGCATATCCTATTGAGATGGCTCAGTTCCATTCTCCCGACTATGTAGAGTTCCTG 3219
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 359 CACAAAGCATATCCTATCGAGATGGCTCAGTTCCATTCTCCTGACTATGTAGAGTTCCTG 418
Query 3220 CAACGAATTAATCCAGAAAATCAGAACTTGTTTCCCAATGAAATGGCTAGATATAATCTG 3279
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 419 CAACGAATTAATCCAGAAAACCAGAACTTGTTCCCCAATGAAATGGCTAGATATAATCTG 478
Query 3280 GGAGAGGATTGTCCTGTGTTTGAAGATCTGTTTGAATTTTGTCAAATTTACGCTGGCGGA 3339
||||||||||||||||| ||||||||| ||||||||||||||||| ||||||| ||||||
Sbjct 479 GGAGAGGATTGTCCTGTCTTTGAAGATTTGTTTGAATTTTGTCAACTTTACGCCGGCGGA 538
Query 3340 ACCATAGATGCTGCACGCAGATTAAACAACAAACTCTGTGACATTGCTATAAATTGGGCG 3399
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 539 ACCATAGATGCTGCACGCAGGTTAAACAACAAACTCTGTGACATTGCTATAAATTGGGCG 598
Query 3400 GGCGGGCTGCACCATGCCAAAAAATGTGATGCATCTGGGTTTTGTTACATCAACGATCTT 3459
|||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 599 GGCGGGTTGCACCATGCCAAAAAATGTGATGCATCTGGGTTTTGCTACATCAACGATCTC 658
Query 3460 GTACTAGGAATTCTTGAGTTGTTAAAACACCATCCCCGTGTGCTATACATAGATATAGAT 3519
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 659 GTGCTAGGAATTCTTGAGTTGTTAAAACACCATCCCCGTGTTCTATACATAGATATAGAT 718
Query 3520 GTTCATCACGGTGATGGAGTTGAAGAAGCTTTTTACTTCACTGACAGAGTAATGACTGTT 3579
|||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 719 GTTCATCATGGTGATGGGGTTGAAGAAGCGTTTTACTTCACTGACAGAGTAATGACTGTT 778
Query 3580 AGCTTTCATAAGTTTGGGGATAAGTTCTTTCCAGGGACAGGCGATGTTAAGGAAATAGGA 3639
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 AGCTTTCATAAGTTTGGGGATAAGTTCTTTCCAGGGACAGGCGATGTTAAGGAAATAGGA 838
Query 3640 GAAAGAGAAGGGAAATTTTACGCCATTAATGTGCCGCTGAAGGATGGAATTGATGACAGT 3699
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 839 GAAAGAGAAGGGAAATTTTACGCCATTAATGTGCCGCTGAAGGATGGTATCGATGACAGT 898
Query 3700 AGTTTCAACCGTCTGTTCAGGACAATAATTTCCAAGGTTGTTGAGATATATCAACCGGGT 3759
|||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 899 AGTTTCAACCGTCTTTTCAGGACTATAATATCCAAGGTTGTTGAGATATATCAACCGGGT 958
Query 3760 GCAATTGTTCTTCAATGTGGGGCAGATTCACTAGCCAGGGATCGACTAGGATGCTTTAAT 3819
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 GCAATTGTTCTTCAATGCGGGGCAGATTCACTAGCCAGGGATCGACTAGGATGCTTTAAT 1018
Query 3820 CTCTCTATTGATG 3832
|||||||||||||
Sbjct 1019 CTCTCTATTGATG 1031
Score = 721 bits (390), Expect = 0.0
Identities = 432/453 (95%), Gaps = 0/453 (0%)
Strand=Plus/Plus
Query 3880 GGACATGCTGAATGTGTTAAATTTGTGAAAAAGTTCAATCTTCCCTTACTGGTTACAGGA 3939
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 1031 GGACATGCTGAATGTGTTAAATTCGTGAAGAAGTTCAATCTTCCCTTACTGGTTACAGGA 1090
Query 3940 GGTGGAGGATACACAAAGGAGAATGTAGCTCGGTGTTGGACCGTTGAGACTGGCATTCTT 3999
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1091 GGTGGAGGATACACAAAGGAGAATGTAGCTCGTTGTTGGACCGTTGAGACTGGCATTCTT 1150
Query 4000 TTGGACACAGAACTTCCTAATGAGATTCCTGAAAACGACTACATCAAGTATTTTGCGCCG 4059
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1151 TTGGACACAGAACTTCCTAATGAGATTCCTGAAAACGACTACATAAAGTATTTTGCGCCG 1210
Query 4060 GATTTTTCTTTGAAGATACCGGGTGGTCACATTGAGAATCTGAATACCAAATCATACATC 4119
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1211 GATTTTTCTTTGAAGATACCGGGTGGTCACATTGAGAATCTTAATACCAAATCGTACATC 1270
Query 4120 AGTTCGATCAAAGTGCAGATTTTGGAGAATTTGCGATACATTCAACACGCTCCAAGCGTG 4179
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1271 AGTTCCATCAAAGTGCAGATTTTGGAGAATTTGCGATACATTCAACACGCTCCAAGCGTA 1330
Query 4180 CAGATGCAGGAGGTTCCACCGGATTTCTACATACCGGATTTTGATGAAGACGAACAAAAC 4239
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1331 CAAATGCAGGAGGTTCCACCGGATTTCTACATACCGGATTTTGATGAAGACGAACAAAAC 1390
Query 4240 CCGGATGAACGTGTGGATCAGCGTTCGCGAGATAAGCAGGTCCAAAGAGACGATGAATAT 4299
||||||| ||||| |||||||||||| || ||||||||| |||| || || |||||||||
Sbjct 1391 CCGGATGTACGTGCGGATCAGCGTTCACGGGATAAGCAGATCCAGAGGGATGATGAATAT 1450
Query 4300 TTCGATGGGGACAATGATAACGATGCTTCGTAA 4332
|||||||| ||||| ||||||||||| || |||
Sbjct 1451 TTCGATGGAGACAACGATAACGATGCGTCATAA 1483
> AT3G44490.1 | Symbols: hda17 | histone deacetylase 17 | chr3:16097479-16098599
FORWARD LENGTH=690
Length=690
Score = 741 bits (401), Expect = 0.0
Identities = 450/474 (95%), Gaps = 1/474 (0%)
Strand=Plus/Plus
Query 3859 CTTTCCCTTATGCATTTCCCAGGACATGCTGAATGTGTTAAATTTGTGAAAAAGTTCAAT 3918
||||| | ||||| |||| ||||||||||||||||||||||||| ||||| |||||||||
Sbjct 5 CTTTCTC-TATGCTTTTCACAGGACATGCTGAATGTGTTAAATTCGTGAAGAAGTTCAAT 63
Query 3919 CTTCCCTTACTGGTTACAGGAGGTGGAGGATACACAAAGGAGAATGTAGCTCGGTGTTGG 3978
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 64 CTTCCCTTACTGGTTACAGGAGGTGGAGGATACACAAAGGAGAATGTAGCTCGTTGTTGG 123
Query 3979 ACCGTTGAGACTGGCATTCTTTTGGACACAGAACTTCCTAATGAGATTCCTGAAAACGAC 4038
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct 124 ACCGTTGAGACTGGCATTCTTTTGGATACAGAACTTCCTAATGAGATTTCTGAAAACGAC 183
Query 4039 TACATCAAGTATTTTGCGCCGGATTTTTCTTTGAAGATACCGGGTGGTCACATTGAGAAT 4098
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 184 TACATAAAGTATTTTGCGCCGGATTTTTCTTTGAAGATACCGGGTGGTCACATTGAGAAT 243
Query 4099 CTGAATACCAAATCATACATCAGTTCGATCAAAGTGCAGATTTTGGAGAATTTGCGATAC 4158
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 244 CTTAATACCAAATCATACATCAGTTCCATCAAAGTGCAGATTTTGGAGAATTTGCGATAC 303
Query 4159 ATTCAACACGCTCCAAGCGTGCAGATGCAGGAGGTTCCACCGGATTTCTACATACCGGAT 4218
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 304 ATTCAACACGCTCCAAGCGTACAGATGCAGGAGGTTCCACCGGATTTCTACATACCGGAT 363
Query 4219 TTTGATGAAGACGAACAAAACCCGGATGAACGTGTGGATCAGCGTTCGCGAGATAAGCAG 4278
|||||||||||||||||||| ||||||| |||||||||||||||||| || |||||||||
Sbjct 364 TTTGATGAAGACGAACAAAATCCGGATGTACGTGTGGATCAGCGTTCACGGGATAAGCAG 423
Query 4279 GTCCAAAGAGACGATGAATATTTCGATGGGGACAATGATAACGATGCTTCGTAA 4332
|||| || || ||||||||||||||||| ||||| ||||||||||| ||||||
Sbjct 424 ATCCAGAGGGATGATGAATATTTCGATGGAGACAACGATAACGATGCATCGTAA 477
> AT3G44660.1 | Symbols: hda10 | histone deacetylase 10 | chr3:16214964-16215785
REVERSE LENGTH=429
Length=429
Score = 641 bits (347), Expect = 0.0
Identities = 377/392 (96%), Gaps = 0/392 (0%)
Strand=Plus/Plus
Query 3941 GTGGAGGATACACAAAGGAGAATGTAGCTCGGTGTTGGACCGTTGAGACTGGCATTCTTT 4000
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 38 GTGGAGGATACACAAAGGAGAATGTAGCTCGTTGTTGGACCGTTGAGACTGGCATTCTTT 97
Query 4001 TGGACACAGAACTTCCTAATGAGATTCCTGAAAACGACTACATCAAGTATTTTGCGCCGG 4060
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 98 TGGATACAGAACTTCCTAATGAGATTCCTGAAAACGACTACATAAAGTATTTTGCGCCGG 157
Query 4061 ATTTTTCTTTGAAGATACCGGGTGGTCACATTGAGAATCTGAATACCAAATCATACATCA 4120
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 158 ATTTTTCTTTGAAGATACCGGGTGGTCACATTGAGAATCTTAATACCAAATCGTACATCA 217
Query 4121 GTTCGATCAAAGTGCAGATTTTGGAGAATTTGCGATACATTCAACACGCTCCAAGCGTGC 4180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 218 GTTCGATCAAAGTGCAGATTTTGGAGAATTTGCGATACATTCAACACGCTCCAAGCGTAC 277
Query 4181 AGATGCAGGAGGTTCCACCGGATTTCTACATACCGGATTTTGATGAAGACGAACAAAACC 4240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 278 AGATGCAGGAGGTTCCACCGGATTTCTACATACCGGATTTTGATGAAGACGAACAAAACC 337
Query 4241 CGGATGAACGTGTGGATCAGCGTTCGCGAGATAAGCAGGTCCAAAGAGACGATGAATATT 4300
|||||| |||||||||||||||||| || ||||||||| ||||||| || ||||||||||
Sbjct 338 CGGATGTACGTGTGGATCAGCGTTCACGGGATAAGCAGATCCAAAGGGATGATGAATATT 397
Query 4301 TCGATGGGGACAATGATAACGATGCTTCGTAA 4332
||||||| ||||| ||||||||||| ||||||
Sbjct 398 TCGATGGAGACAACGATAACGATGCGTCGTAA 429
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 215968689615
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5