BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg347555 Length=918 Score E Sequences producing significant alignments: (Bits) Value AT3G44770.1 | Symbols: | Protein of unknown function (DUF626) ... 545 2e-154 > AT3G44770.1 | Symbols: | Protein of unknown function (DUF626) | chr3:16316080-16319458 FORWARD LENGTH=1518 Length=1518 Score = 545 bits (295), Expect = 2e-154 Identities = 347/373 (93%), Gaps = 0/373 (0%) Strand=Plus/Plus Query 401 AGACCTTGGTCACAAGATCTTTCTCTAGGAATGGAGAGCACTTAAGAGTCTCTACTGGAA 460 ||| |||||||||||||||||| |||||||| |||||| ||||||||||||||||||||| Sbjct 701 AGAACTTGGTCACAAGATCTTTTTCTAGGAACGGAGAGGACTTAAGAGTCTCTACTGGAA 760 Query 461 TTTGCAGAATCAAACCCGAAACACCTGAAGGAGATATCTGTCTTGTGGATGAGGAAGCAA 520 ||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct 761 TTTGCAGAATCAAACCCAAAACACCTGAAAGAGAGATCTGTCTTGTGGATGAGGAAGCAA 820 Query 521 TAGATAAGTTTTACAAAGGTGTTATGCCCAACTTTGTGTCCAAAGAAGGAGCTGTCAATG 580 ||||||||||||||| |||||||||||||||||||||||||||| ||| |||| | ||| Sbjct 821 TAGATAAGTTTTACAGAGGTGTTATGCCCAACTTTGTGTCCAAACTAGGGGCTGACGATG 880 Query 581 ATAAGTTGAGATTCTACGAGGTTCAGGAGCAGGACATATGTGCAAATGATTGGCTACGTC 640 ||||| |||| |||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 881 ATAAGCTGAGGTTCTACGAGGTTCAGGAGCAGGACGTATGTGCAAATGATTGGTTACGTC 940 Query 641 TATATACTGAATTTGCACTTTTTTCCTTCTGGAGATATAATGAGGATGGGTTTGAGTCTT 700 ||||||||||||| |||||||| |||| |||||||||||||||||| || |||||||||| Sbjct 941 TATATACTGAATTCGCACTTTTCTCCTACTGGAGATATAATGAGGACGGATTTGAGTCTT 1000 Query 701 GTTTACCTGTGGAGATCAAGAAGATAATTGTGGAGACTTGTGAAACTCATAGAGAGCCGC 760 |||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||| Sbjct 1001 GTTTACCTGTGGAGATCAAGAAGATAATTGTGGAAACTTGTGACACTCACAGAGAGCCGC 1060 Query 761 GTCTGAAGCTGAA 773 || |||||||||| Sbjct 1061 GTATGAAGCTGAA 1073 Score = 305 bits (165), Expect = 4e-82 Identities = 203/221 (92%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 183 TCTGGGTTTCGATATTGATGGTAATGTTCGTATCCCATCATGTGGAATCTCACCAGTCTT 242 ||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct 445 TCT-GGTTTCGATATTGATGGTAAAGTTTGTATCCCAGCATGTGGAATCTCACCAGTCTT 503 Query 243 TCTAGGTGCTAATGAAAGCCCGCATAGCGAAATCAG-TCTTTATGGCCGTTTGGGAGTTC 301 ||||||||||||| ||| ||||| ||||||| || | ||||||||||||||||||||||| Sbjct 504 TCTAGGTGCTAATAAAAACCCGCGTAGCGAAGTC-GCTCTTTATGGCCGTTTGGGAGTTC 562 Query 302 ATTGCTTCAATATTGACAAGGAGGGGAAGTTGAAGTATATGCGCATACCTAAATACAATA 361 |||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 563 ATTGCTTCAACATTGACAAGGAGAGGAAGTTTCAGTATATGCGCATACCTAAATACAATG 622 Query 362 TTCAATTTCCTAAAGCTATGTCTTTCTATATAACCGTGGAG 402 |||||| |||| |||||||||||||| |||||||||||||| Sbjct 623 TTCAATATCCTGAAGCTATGTCTTTCCATATAACCGTGGAG 663 Score = 239 bits (129), Expect = 4e-62 Identities = 153/165 (93%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 23 GTGGGAAATTATCAGACGAAACCTGCCACTCGATTTTGTGTGGATTAGGTAAACATGTCG 82 |||| |||||||| |||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 241 GTGGAAAATTATCTGACGAAACCTGCCACTCGATTTTGTGTGGATTGGGTCAACATGTCG 300 Query 83 ATGCTTTTCATTTATCCAAAACCAAAGAAGAAGTTGATGGATGGACTTCGGAGGAAGATG 142 ||||||| ||||||||||||||| |||||||||| || |||||||| || |||||||||| Sbjct 301 ATGCTTTACATTTATCCAAAACCGAAGAAGAAGTCGACGGATGGACATCTGAGGAAGATG 360 Query 143 AACAGCTTGACCAAGAATACTGTCGCCAAGTTACCGAGTCTCTGG 187 || | |||||||||||||||||||||||||||||||||||||||| Sbjct 361 AAGAACTTGACCAAGAATACTGTCGCCAAGTTACCGAGTCTCTGG 405 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 44859093271 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5