BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg347581
Length=2352
Score E
Sequences producing significant alignments: (Bits) Value
AT3G44920.1 | Symbols: ATCHX11, CHX11 | cation/H+ exchanger 11 ... 3330 0.0
AT3G44930.1 | Symbols: ATCHX10, CHX10 | cation/H+ exchanger 10 ... 3219 0.0
> AT3G44920.1 | Symbols: ATCHX11, CHX11 | cation/H+ exchanger 11
| chr3:16397038-16399725 REVERSE LENGTH=2352
Length=2352
Score = 3330 bits (1803), Expect = 0.0
Identities = 2179/2362 (92%), Gaps = 20/2362 (1%)
Strand=Plus/Plus
Query 1 ATGAACACGACTACTTACATTGGGGATTGCCGAATATCATTATTCAACATATCTTCTAAG 60
|||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||
Sbjct 1 ATGAACACGACTACTTACATTGGGCATTGCCGGATATCATTCTTCAACATATCTTCTCAG 60
Query 61 GGATTTTGGGAGAACCTAAAATCG-CTCGATGTAGTTTTTGGGTACTCGTTGCCTCTCCT 119
|||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||
Sbjct 61 GGATTTTGGGAGAACCTAAAATCGCCT-GATGTGGTTTTCGGGTACTCGTTGCCTCTCCT 119
Query 120 GGAGATTCAAATAATACTT-ATATTCTTTTGTATTGTCATGTCTCACATGTTCCTCAGAT 178
|||||||||||||||| || |||||||| || |||||||||||||| |||||||||||||
Sbjct 120 GGAGATTCAAATAATA-TTGATATTCTTCTGCATTGTCATGTCTCATATGTTCCTCAGAT 178
Query 179 GCATCGGCATTTCCCAGATCGTTTCATATATGATTGCTGGAATAATTCTAGGGCCTCAAC 238
|||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 179 GCATCGGCGTTTCCCAGATCGTTTCATATATGATTGCTGGACTAATTCTAGGGCCTCAGC 238
Query 239 TTTTCGATTTACTGGAGAATTCTTCA-GAGAAACTATCGGCGGATCCTGCGTTGGATGGA 297
|||||||| |||| ||||| |||||| || ||||||||||||||||||||||||||||||
Sbjct 239 TTTTCGATATACTAGAGAAGTCTTCAGGA-AAACTATCGGCGGATCCTGCGTTGGATGGA 297
Query 298 ACTGCGGCGTTAAGATGCATTTCGGTGTTTGGAAGACTAATGTTTACGTTTCTAATGACT 357
|| || ||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 298 ACCGCAGCGTTAAGATGCATTTCAGTATTTGGAAGACTAATGTTTACGTTTCTAATGACT 357
Query 358 GTTAGAACCAGCAGGCGAGTGGCGTTTCATAGCGGAAATTTGCCCGTTGTGATTGGGATC 417
||||| ||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||||
Sbjct 358 GTTAGGACCAGCAGGCGGGTGGCGTTCCATAGCGGAAAATTGCCAGTTGTGATCGGGATC 417
Query 418 GTTTCCTTCTTTGCTCCTCTGTTTGGTCTCGGTTTCGTGAACCTTTTCTCTGACAACATC 477
|| ||||||||||||||| ||||| ||||| ||||| ||||||||||| |||||||||||
Sbjct 418 GTGTCCTTCTTTGCTCCTTTGTTTAGTCTCAGTTTCCTGAACCTTTTCACTGACAACATC 477
Query 478 GACCCTCACTACATGCCTCTAGATAAAGCCCTGAG-CGAGCGCATTGCGATTGTCATAAC 536
||||||||||||||| || |||| ||||||||| | |||||||| || ||||||||||||
Sbjct 478 GACCCTCACTACATGTCTTTAGACAAAGCCCTG-GCCGAGCGCACTGTGATTGTCATAAC 536
Query 537 TCAATCTTC-GATACTTTTGCCTTCCACTACATATATATTGCTAGAGCTCAAGATCATCA 595
||| || || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 537 TCAGTC-TCAGATACTTTTGCCTTCCACTACATATATATTGCTAGAGCTCAAGATCATCA 595
Query 596 ACTCCGAGCTTGGTCGCCTTGCATTGTCTGCATGTGTTATCAACGACATCTTGGGGATTT 655
||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||
Sbjct 596 ACTCCGAGCTTGGTCGCCTTGCATTATCTGCAAGTGCCATCAACGACATGTTGGGGATTT 655
Query 656 TTGCCATGATGGTCGCCACTATACAAGCAACCTACATTCATGTTTCACATGCAACAGCCT 715
|||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||| |
Sbjct 656 TTGCCATGATAGTCGCCACTACACAAGCAACCTACATTCATGTTTCACATGCAATAGCTT 715
Query 716 ATCGTGACATTGTCGCAATGATCATCTTCTTTCTCATCGT-TTTTCTTGTTTTTAAGCCG 774
| |||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||||
Sbjct 716 ACCGTGACCTTGTCGCGGTGATCATCTTCTTTCTCATCGTCTTTT-TTGTTTTTAAGCCG 774
Query 775 ATGGTGCAATGGATCATAGACCGCACACCCGAAGACAAGCCAGTGGAGGATATATATATT 834
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 775 ATGGTGCAATGGATCATAGACCGCACACCCGAAGACAAGCCCGTGGAGGATATATACATT 834
Query 835 CATGTCGTGATTCTGACTGTATTTGCTTCAGCGGCTTATTTTGTGTTTTTCAACATGAAA 894
|||| |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||
Sbjct 835 CATGCCGTGATTCTGACAGCATTTGCTTCCGCGGCTTATTTTGTGTTTTTCAACATGAAA 894
Query 895 TACATCTTAGGACCATTAATAATCGGCATCATCATACCTGAGGGTCCACCGTTAGGATCG 954
||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 895 TACGTCTTAGGACCATTAATTATCGGCATCATCATACCAGAGGGTCCACCGTTAGGATCC 954
Query 955 GCTCTGGAGGCTAAGTTTGAGAGGCTCACGATGAACGTGTTCTTACCAATCTCAATAACA 1014
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 955 GCTCTGGAGGCTAAGTTTGAGAGGCTCACGATGAACGTGTTCTTACCAATCTCAATCACA 1014
Query 1015 TTCAGCGCAATGAGATGTGATGTAGTAAGGATCTTTAGCCAGTTCACTGACATCTTCTTC 1074
|||||||| ||||||||||||| | |||||||| ||||||||||||||||||||| ||||
Sbjct 1015 TTCAGCGCGATGAGATGTGATGGACTAAGGATCCTTAGCCAGTTCACTGACATCTACTTC 1074
Query 1075 AACATCTTCCTAACATTTCTTATACTTGTCATAAAACTGGTCGCATGCCTTACACCTTGC 1134
||||||||||||||||| ||||||||||||||||||||||| || |||||||||| ||||
Sbjct 1075 AACATCTTCCTAACATTGCTTATACTTGTCATAAAACTGGTTGCTTGCCTTACACTTTGC 1134
Query 1135 TTGTACTACAAGTTACCTCTTAGTGAATCCATGGCTGTTTCCCTCATCTTGAGCTACAAA 1194
||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||||
Sbjct 1135 TTGTACTACAAGTTACCTCGCAGTGAATCCTTGGCTGTTTCCCTCATCTTAAGCTACAAA 1194
Query 1195 AGTTTTGTTGAATTCGTTCTCTATGAATCTGTATTAGAGGAAAAGTTGATATCGCTGGCC 1254
||||||||||||||||||||||||||| |||||||||| |||||||| ||||| | ||||
Sbjct 1195 AGTTTTGTTGAATTCGTTCTCTATGAAGCTGTATTAGAAGAAAAGTTCATATCACAGGCC 1254
Query 1255 ACTTACGCGTTCTTAATCATATATTCACTATTAAATGCAGGGATTGTTCCTATGGTCTTA 1314
|||||||||||||||||| ||||||| ||| ||| |||||||||||| ||||||||| ||
Sbjct 1255 ACTTACGCGTTCTTAATCCTATATTCGCTACTAAGTGCAGGGATTGTCCCTATGGTCGTA 1314
Query 1315 AGGAGCATGTACGATCCGAAACGAAAGTACGTTAATTACCAGAAAAGGGACATATTGCAT 1374
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1315 AGGAGCATGTACGATCCGAAACGAAAGTACGTTAATTATCAGAAAAGGGACATATTGCAT 1374
Query 1375 CTAGAACCAAACTCAGATCTTCGAATTCTAACTTGTTTGTACAAACAAGAAAACGTCTCT 1434
|||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||||||
Sbjct 1375 CTAGAAGCAAACTCAGGTCTTCGAATTCTAACTTGTTTGCACAAACCAGAAAACGTCTCG 1434
Query 1435 GAGACCATTGCACTCCTTCAATTGTTGTCCTCACCGA-ACCTTGACTTCCTTATCACGGT 1493
|||||||| ||| |||| |||||||| |||||||||| || | ||||||| |||| ||||
Sbjct 1435 GAGACCATAGCATTCCTCCAATTGTTTTCCTCACCGATACAT-GACTTCCCTATCGCGGT 1493
Query 1494 CACAGTTCTCCACCTTGTGAAGCTAGTTGGTCAGATCAACCCTATCATAGTCTCACACGA 1553
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1494 CACAGTTCTCCACCTTGTGAAGCTAGTTGGTCAGATCAACCCTATCATAGTGTCACACGA 1553
Query 1554 CAAGAAGTTGAAAAGGCTTCACAAAAACTCATACATCCATACCGCAAACCTTGCCTTTAG 1613
|||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1554 CAAGAAGTTGAAGCGGCTTCACAAAAACTCGTACATCCATACCGCAAATCTTGCCTTTAG 1613
Query 1614 ACAGTTCATGGAAGAAACCTTAGCGTCTGTAACCGTGACAACGTTCACCGCTTTCTCGCA 1673
|||||||||| |||||| ||||| ||||||||||||||| ||||||||||| ||||||||
Sbjct 1614 ACAGTTCATGCAAGAAAGCTTAGAGTCTGTAACCGTGACTACGTTCACCGCGTTCTCGCA 1673
Query 1674 TGAGAACTTGATGCACGAAGACATTTGCACACTTGCACTTGACCGGACGACATCGATGAT 1733
||| |||||||||||||||||||| || |||||||||||||| || || |||||||||||
Sbjct 1674 TGAAAACTTGATGCACGAAGACATATGTACACTTGCACTTGATCGAACAACATCGATGAT 1733
Query 1734 TATCGTCCCATCGGGGAGGAAATGGACCATAGATGGGATCTTTGAGTCTGACGACAATGC 1793
| |||||||||||||||||||||||||| |||||||||| || |||||||||||| |||
Sbjct 1734 TGTCGTCCCATCGGGGAGGAAATGGACCGTAGATGGGATGTTCGAGTCTGACGACCTTGC 1793
Query 1794 CATAAGACATA-TAAACAAGTCATTACTCGATAGTGCGCCTTGTTCTATAGGCATTCTAG 1852
|||||| | ||||| |||||||||||||| ||||||||||||| |||||||| ||||
Sbjct 1794 TGCAAGACA-ACTAAACCAGTCATTACTCGATCGTGCGCCTTGTTCGATAGGCATACTAG 1852
Query 1853 TAGATCGGGGACAGTTCTCGCGGAAAAGCAATGTAACAAGCAAGTATAGGTACAACATTG 1912
||||||| ||||| ||||||||||||||| ||||||| |||||| |||||||||||||||
Sbjct 1853 TAGATCGTGGACAATTCTCGCGGAAAAGCTATGTAACGAGCAAGAATAGGTACAACATTG 1912
Query 1913 ATGTCGGTGTACTATTCATTGGAGGCAAAGACGATAGGGAGGCACTATCATTGGTGAAAA 1972
|||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1913 ATGTTGGTGTGCTCTTCATTGGAGGCAAAGACGATAGGGAGGCACTATCATTGGTGAAGA 1972
Query 1973 GGATGAAACATAACACGAGGGTTCGTGTAACCCTGATTCGACTCATCTTCGACCATGAAA 2032
|||||||| ||||| || |||| ||||||||| |||| ||||||||||||||||||||||
Sbjct 1973 GGATGAAATATAACCCGCGGGTCCGTGTAACCGTGATCCGACTCATCTTCGACCATGAAA 2032
Query 2033 TAGAGTCAGATTGGGACTATGTTCTTGATAACGAAGGCATAAAGGATTTGATGAGTACTG 2092
|||||||||| ||||||||| ||||||||||||| ||| | |||||||| | ||||||||
Sbjct 2033 TAGAGTCAGAGTGGGACTATATTCTTGATAACGAGGGCCTGAAGGATTTAAAGAGTACTG 2092
Query 2093 AAGACAACAAAGATATTGTTTATACAGAGAGGATAGTGAAC-AGTGGT-GTTGAGGTAGT 2150
|| ||| |||||||| |||||||||||||||| |||| | |||| | |||||||||||
Sbjct 2093 AATCCAATGAAGATATTCTTTATACAGAGAGGATTGTGA-CTAGTG-TCGTTGAGGTAGT 2150
Query 2151 CAAAGCTGTCCAATTGCTTGCAAAAGAGTACGATCTTATGGTGGTTGGCAGAGATCATGA 2210
|||||||||||||||||||||| ||||||||||||| |||||||| || |||||||||||
Sbjct 2151 CAAAGCTGTCCAATTGCTTGCAGAAGAGTACGATCTAATGGTGGTCGGGAGAGATCATGA 2210
Query 2211 TATGACATCACAAGACTTATCAGGACTAATGGAATGGGTCGAACTACCAGAGTTAGGTGT 2270
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2211 TATGACATCACAAGACTTATCAGGACTAACGGAATGGGTCGAACTACCAGAGTTAGGTGT 2270
Query 2271 CATCGGGGATTTGCTGGCGGCTAGAGATCTAAGCTCTAAGATCTCGGTTTTAGTAGTTca 2330
|||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 2271 CATCGGGGATTTGCTGGCGGCTAGAGATCTAAACTCTAAGGTCTCGGTTTTAGTAGTTCA 2330
Query 2331 acaacaacaacaacaaacCTGA 2352
|||||||||||||||||| |||
Sbjct 2331 ACAACAACAACAACAAACGTGA 2352
> AT3G44930.1 | Symbols: ATCHX10, CHX10 | cation/H+ exchanger 10
| chr3:16402058-16404672 REVERSE LENGTH=2352
Length=2352
Score = 3219 bits (1743), Expect = 0.0
Identities = 2156/2359 (91%), Gaps = 14/2359 (1%)
Strand=Plus/Plus
Query 1 ATGAACACGACTACTTACATTGGGGATTGCCGAATATCATTATTCAACATATCTTCTAAG 60
||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||
Sbjct 1 ATGAACACGACTACTTACATTGGGGATTGTCGAATATCATTCTTCAACATATCTTCCCAG 60
Query 61 GGATTTTGGGAGAACCTAAAATCG-CTCGATGTAGTTTTTGGGTACTCGTTGCCTCTCCT 119
||||||||||| |||||||||||| || ||||| ||||| || |||||| ||||||||||
Sbjct 61 GGATTTTGGGATAACCTAAAATCGCCT-GATGTGGTTTTCGGCTACTCGCTGCCTCTCCT 119
Query 120 GGAGATTCAAATAATACTTATATTCTTTTGTATTGTCATGTCTCACATGTTCCTCAGATG 179
|||||||| |||||||| |||||||| || |||||||||||||| ||||||||||||||
Sbjct 120 AGAGATTCAGATAATACTGATATTCTTCTGCATTGTCATGTCTCATATGTTCCTCAGATG 179
Query 180 CATCGGCATTTCCCAGATCGTTTCATATATGATTGCTGGAATAATTCTAGGGCCTCAACT 239
||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||| ||
Sbjct 180 CATCGGCATTTCCCAAATCGCTTCATATATGATTGCTGGAATAGTTCTAGGGCCTCAGCT 239
Query 240 TTTCGATTTACTGGAGAATTCTTCAGAGAAACTATCGGCGGATCCTGCGTTGGATGGAAC 299
||| ||| |||| ||||| ||||||| ||||||||| | ||||||||||||||||||||
Sbjct 240 TTTTGATGTACTAGAGAAATCTTCAGGGAAACTATCCGTGGATCCTGCGTTGGATGGAA- 298
Query 300 T-GCGGCGTTAAGATGCATTTCGGTGTTTGGAAGACTAATGTTTACGTTTCTAATGACTG 358
| || |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct 299 TCGCAGCGTTAAGATGCATCTCGGTGTTTGGAACACTAATGTTTACGTTTCTAATGACTG 358
Query 359 TTAGAACCAGCAGGCGAGTGGCGTTTCATAGCGGAAATTTGCCCGTTGTGATTGGGATCG 418
||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct 359 TTAGAACCAGCAGGCGAGTGGCGTTCCATAGCGGAAAATTGCCCGTTGTGATCGGGATCG 418
Query 419 TTTCCTTCTTTGCTCCTCTGTTTGGTCTCGGTTTCGTGAACCTTTTCTCTGACAACATCG 478
| ||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||
Sbjct 419 TGTCCTTCTTTGCTCCTCTGTTTGGTCTCGGTTTCCAGAATTTTTTTTCTGACAACATCG 478
Query 479 ACCCTCACTACATGCCTCTAGA-TAAAGCCCTGA-GCGAGCGCATTGCGATTGTCATAAC 536
|||||||||||||||||||| | ||||||||| | | ||||||| |||||||||||||||
Sbjct 479 ACCCTCACTACATGCCTCTA-ACTAAAGCCCT-AGGTGAGCGCACTGCGATTGTCATAAC 536
Query 537 TCAATCTTCGATACTTTTGCCTTCCACTACATATATATTGCTAGAGCTCAAGATCATCAA 596
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 537 TCAATCTTCGATACTTTTGCCTTCCACTACATATATCTTGCTAGAGCTCAAGATCATCAA 596
Query 597 CTCCGAGCTTGGTCGCCTTGCATTGTCTGCATGTGTTATCAACGACATCTTGGGGATTTT 656
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 597 CTCCGAGCTAGGTCGCCTTGCATTGTCTGCATGTGTCATCAACGACATCTTGGGGATTTT 656
Query 657 TGCCATGATGGTCGCCACTATACAAGCAACCTACATTCATGTTTCACATGCAACAGCCTA 716
| ||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 657 TTCCATGATAGTTGCCTCTATACAAGCGACCTACATTCATGTTTCACATGCAACAGCCTA 716
Query 717 TCGTGACATTGTCGCAATGATCATCTTCTTTCTCATCGTTTTTCTTGTTTTTAAGCCGAT 776
|||||||| |||||| |||||||||| |||||| |||| ||||||||||||||||| ||
Sbjct 717 TCGTGACACTGTCGCGGTGATCATCTTTTTTCTCGTCGTCTTTCTTGTTTTTAAGCCTAT 776
Query 777 GGTGCAATGGATCATAGACCGCACACCCGAAGACAAGCCAGTGGAGGATATATATATTCA 836
|||||||||| |||||||||||||||| ||||||||||||||||||||||| || |||||
Sbjct 777 GGTGCAATGGGTCATAGACCGCACACCGGAAGACAAGCCAGTGGAGGATATGTACATTCA 836
Query 837 TGTCGTGATTCTGACTGTATTTGCTTCAGCGGCTTATTTTGTGTTTTTCAACATGAAATA 896
|| ||||||| | || | ||| ||||| || |||||||||||||||||||||||||||||
Sbjct 837 TGCCGTGATTATTACCGCATTGGCTTCCGCTGCTTATTTTGTGTTTTTCAACATGAAATA 896
Query 897 CATCTTAGGACCATTAATAATCGGCATCATCATACCTGAGGGTCCACCGTTAGGATCGGC 956
|| |||||||||||||| || |||||||||||||| ||||||||||| |||||||||||
Sbjct 897 TATTTTAGGACCATTAATGATTGGCATCATCATACCAGAGGGTCCACCATTAGGATCGGC 956
Query 957 TCTGGAGGCTAAGTTTGAGAGGCTCACGATGAACGTGTTCTTACCAATCTCAATAACATT 1016
||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 957 TCTAGAGGCTAAGTTTGAGAGGCTCACAATGAACGTGTTCTTACCAATCTCAATCACATT 1016
Query 1017 CAGCGCAATGAGATGTGATGTAGTAAGGATCTTTAGCCAGTTCACTGACATCTTCTTCAA 1076
|||||| ||||||||||||| || ||||||| |||||||||||| |||||||||||||||
Sbjct 1017 CAGCGCGATGAGATGTGATGGAGCAAGGATCCTTAGCCAGTTCAATGACATCTTCTTCAA 1076
Query 1077 CATCTTCCTAACATTTCTTATACTTGTCATAAAACTGGTCGCATGCCTTACACCTTGCTT 1136
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1077 CATCTTCCTAACATTTCTTATACTTGTCATAAAACTGGTCGCATGCCTTGCACCTTGCTT 1136
Query 1137 GTACTACAAGTTACCTCTTAGTGAATCCATGGCTGTTTCCCTCATCTTGAGCTACAAAAG 1196
|||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1137 GTACTACAAGTTACCTCTCAGTGAATCCTTGGCTGTTTCCTTCATCTTGAGCTACAAAAG 1196
Query 1197 TTTTGTTGAATTCGTTCTCTATGAATCTGTATTAGAGGAAAAGTTGATATCGCTGGCCAC 1256
||||| ||| || |||||||||||| |||||||||| || | || ||||||| |||||
Sbjct 1197 TTTTGCTGATTTTGTTCTCTATGAAGCTGTATTAGACGACACGTACATATCGCAAGCCAC 1256
Query 1257 TTACGCGTTCTTAATCATATATTCACTATTAAATGCAGGGATTGTTCCTA-TGGTCTTAA 1315
|||| ||||||||||| ||||||| ||| ||||||| |||||||| |||| | |||||||
Sbjct 1257 TTACTCGTTCTTAATCTTATATTCGCTACTAAATGCCGGGATTGTCCCTACT-GTCTTAA 1315
Query 1316 GGAGCATGTACGATCCGAA-ACGAAAGTACGTTAATTACCAGAAAAGGGACATATTGCAT 1374
|||| ||||||||||| || | ||||||||||||||||||||||||||||||||||||||
Sbjct 1316 GGAGGATGTACGATCC-AAGAAGAAAGTACGTTAATTACCAGAAAAGGGACATATTGCAT 1374
Query 1375 CTAGAACCAAACTCAGATCTTCGAATTCTAACTTGTTTGTACAAACAAGAAAACGTCTCT 1434
||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 1375 CTAGAACGAAACTCAGATCTTCGAATTCTAACTTGTTTGCACAAACCAGAAAACGTCTCA 1434
Query 1435 GAGACCATTGCACTCCTTCAATTGTTGTCCTCACCGAACCTTGACTTCCTTATCACGGTC 1494
|||||||| ||| |||| ||||||||||||||||||||||| ||||||| |||| ||||
Sbjct 1435 GAGACCATAGCATTCCTACAATTGTTGTCCTCACCGAACCTAGACTTCCCTATCGCGGTT 1494
Query 1495 ACAGTTCTCCACCTTGTGAAGCTAGTTGGTCAGATCAACCCTATCATAGTCTCACACGAC 1554
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 1495 ACAGTTCTCCACCTTGTGAAGCTCGTTGGTCAGATAAACCCTATCATAGTCTCACACGAC 1554
Query 1555 AAGAAGTTGAAAAGGCTTCACAAAAACTCATACATCCATACCGCAAACCTTGCCTTTAGA 1614
||||| |||||| ||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 1555 AAGAAATTGAAACGGCTTAACAAAGACTCATACATCCATACCGCAAACCTTGCCTTTAGA 1614
Query 1615 CAGTTCATGGAAGAAACCTTAGCGTCTGTAACCGTGACAACGTTCACCGCTTTCTCGCAT 1674
|| ||| || ||||| ||||| |||||||||||||||||||||||| || |||||||||
Sbjct 1615 CAATTCGTGTTAGAAAGCTTAGAGTCTGTAACCGTGACAACGTTCACTGCGTTCTCGCAT 1674
Query 1675 GAGAACTTGATGCACGAAGACATTTGCACACTTGCACTTGACCGGACGACATCGATGATT 1734
|| ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||
Sbjct 1675 GAAAACTTGATGCACGAAGACATTTGTACACTTGCACTTGACAAAACAACATCGATGATT 1734
Query 1735 ATCGTCCCATCGGGGAGGAAATGGACCATAGATGGGATCTTTGAGTCTGACGACAATGCC 1794
||||||||||||||||||||||||| |||||||| | || ||||||||| ||| |||
Sbjct 1735 GTCGTCCCATCGGGGAGGAAATGGACTGTAGATGGGTTATTCGAGTCTGACAACACTGCT 1794
Query 1795 ATAAGACATATAAACAAGTCATTACTCGATAGTGCGCCTTGTTCTATAGGCATTCTAGTA 1854
||||||||| ||||| |||| ||||||||| |||||||||||||||| ||||| ||||||
Sbjct 1795 ATAAGACATCTAAACCAGTCGTTACTCGATCGTGCGCCTTGTTCTATCGGCATACTAGTA 1854
Query 1855 GATCGGGGACAGTTCTCGCGGAAAAGCAATGTAACAAGCAAGTATAGGTACAACATTGAT 1914
|| || ||||| |||||||| ||||| | |||||| ||||| | ||||||| |||||||
Sbjct 1855 GACCGTGGACAATTCTCGCGAAAAAGTATTGTAACGAGCAAAAAAAGGTACATCATTGAT 1914
Query 1915 GTCGGTGTACTATTCATTGGAGGCAAAGACGATAGGGAGGCACTATCATTGGTGAAAAGG 1974
|| ||||| || |||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1915 GTTGGTGTGCTCTTCATTGGAGGCAAAGACGATAGGGAAGCACTATCATTGGTGAAGAGG 1974
Query 1975 ATGAAACATAACACGAGGGTTCGTGTAACCCTGATTCGACTCATCTTCGACCATGAAATA 2034
|||||| ||||| ||||| | ||||||||| |||| |||||| |||||||||||||||||
Sbjct 1975 ATGAAAAATAACCCGAGGATCCGTGTAACCGTGATCCGACTCGTCTTCGACCATGAAATA 2034
Query 2035 GAGTCAGATTGGGACTATGTTCTTGATAACGAAGGCATAAAGGATTTGATGAGTACTGAA 2094
|||||||||||||| ||| ||||||||||||||||| |||||||||||| ||||||||||
Sbjct 2035 GAGTCAGATTGGGATTATATTCTTGATAACGAAGGCTTAAAGGATTTGAAGAGTACTGAA 2094
Query 2095 GACAACAAAGATATTGTTTATACAGAGAGGATAGTGAAC-AGTGGTGTTGAGGTAGTCAA 2153
|||||||||||||||| ||||| ||||||||| ||| || ||| ||||||||||||||||
Sbjct 2095 GACAACAAAGATATTGATTATATAGAGAGGATTGTG-ACTAGTAGTGTTGAGGTAGTCAA 2153
Query 2154 AGCTGTCCAATTGCTTGCAAAAGAGTACGATCTTATGGTGGTTGGCAGAGATCATGATAT 2213
||||||||||||||||||| ||||||||||||| |||||||| || ||||||||||||||
Sbjct 2154 AGCTGTCCAATTGCTTGCAGAAGAGTACGATCTAATGGTGGTCGGGAGAGATCATGATAT 2213
Query 2214 GACATCACAAGACTTATCAGGACTAATGGAATGGGTCGAACTACCAGAGTTAGGTGTCAT 2273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2214 GACATCACAAGACTTATCAGGACTAATGGAATGGGTCGAACTACCAGAGTTAGGTGTCAT 2273
Query 2274 CGGGGATTTGCTGGCGGCTAGAGATCTAAGCTCTAAGATCTCGGTTTTAGTAGTTcaaca 2333
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct 2274 CGGGGATTTGCTGGCGGCTAGAGATCTAAGCTCTAAGGTTTCGGTTTTAGTAGTTCAACA 2333
Query 2334 acaacaacaacaaacCTGA 2352
||||||||||| ||| |||
Sbjct 2334 ACAACAACAACGAACGTGA 2352
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116766467670
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5