BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg347590 Length=855 Score E Sequences producing significant alignments: (Bits) Value AT5G03360.1 | Symbols: | DC1 domain-containing protein | chr5:... 126 3e-28 AT1G66440.1 | Symbols: | Cysteine/Histidine-rich C1 domain fam... 121 1e-26 > AT5G03360.1 | Symbols: | DC1 domain-containing protein | chr5:817864-825149 FORWARD LENGTH=4923 Length=4923 Score = 126 bits (68), Expect = 3e-28 Identities = 95/107 (89%), Gaps = 6/107 (6%) Strand=Plus/Plus Query 571 CATTTTCGATG-CGCAGGTTGCAATGGCGAGAACCATGAAGAATAT-AACAAGACTCCGG 628 ||||||||||| || |||||||||||| ||||||||| ||| ||| ||| || |||||| Sbjct 3757 CATTTTCGATGTCG-AGGTTGCAATGGTGAGAACCATAAAGGTTATGAAC-AGGCTCCGG 3814 Query 629 TTGA-GATCAAACACCATCTTCATCCAAAACATTCTCTTCAGCTTGT 674 |||| | ||||||||| |||||||||||||||||||||||||||||| Sbjct 3815 TTGATG-TCAAACACCCTCTTCATCCAAAACATTCTCTTCAGCTTGT 3860 > AT1G66440.1 | Symbols: | Cysteine/Histidine-rich C1 domain family protein | chr1:24782171-24784351 FORWARD LENGTH=2181 Length=2181 Score = 121 bits (65), Expect = 1e-26 Identities = 166/213 (78%), Gaps = 14/213 (7%) Strand=Plus/Plus Query 571 CATTTTCGATGCGCAGGTTGC-AATGGCGAGAACCATGAAGAATATAACAAGACTCCGGT 629 ||||||| ||| || ||||| || || || || |||||||||||| | ||| |||| | Sbjct 613 CATTTTCTCTGCCCAAGTTGCGAA-GGTGATAATCATGAAGAATATGAGAAGGCTCCACT 671 Query 630 TGAGATCAAACACCATCTTCATCCAAAACATTCTCTTCAGCTTGTC----AAGT-T-GAA 683 |||| ||||||||| |||||||||||||||||||||||||||| || || | | Sbjct 672 TGAGGTCAAACACCCTCTTCATCCAAAACATTCTCTTCAGCTTATCTTGGAAAACTCGTG 731 Query 684 GGG-TGGCGAGACCAGGAAATGTTATTGTTGTGATGAAGATA-TCATAATG-ATAttttt 740 ||| || ||| | || ||||| ||||||||||||||| ||| || || || ||||||| Sbjct 732 GGGATGTCGAAAAAAG-AAATGCTATTGTTGTGATGAA-ATACTCCTA-TGGATATTTTA 788 Query 741 ttATTGCTCGACTTGCGATTTTGCTATGAACAT 773 ||| || | | |||||||| || ||||||||| Sbjct 789 TTACTGTTGGGTTTGCGATTGTGGTATGAACAT 821 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41694342010 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5