BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg347611 Length=759 Score E Sequences producing significant alignments: (Bits) Value AT1G05400.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 137 1e-31 > AT1G05400.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06810.1); Has 31 Blast hits to 31 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:1584073-1585421 FORWARD LENGTH=996 Length=996 Score = 137 bits (74), Expect = 1e-31 Identities = 153/189 (81%), Gaps = 14/189 (7%) Strand=Plus/Plus Query 33 TTGGGGCATG-AGCACTTGTCCGGTTCCCGATGGCTATGATGCTCGTCGGGTTGGTCCGT 91 ||||| |||| || | ||||||||||| |||| |||||||||||||||||||||||||| Sbjct 159 TTGGGACATGAAG-AGGTGTCCGGTTCCAGATGACTATGATGCTCGTCGGGTTGGTCCGT 217 Query 92 GTATTAAACGAGCATTG-AAG-AAATTAGGCTACACTGGTGGTGTCTCCATCACTGGCC- 148 |||||||||| | ||| ||| |||| |||||||| |||| |||| ||||||||| | Sbjct 218 GTATTAAACG-G-ATTTTAAGGAAATCAGGCTACAATGGTCCTGTCACCATCACTG-CTG 274 Query 149 TTGGCAT-ACTAACAAACGTCTCTACC-GACATCCT-GCAAGCGCTCTATTCCTCCGGAG 205 ||||| | |||| |||| ||| || | |||||||| | ||| | ||| |||| | ||| Sbjct 275 TTGGC-TCACTATCAAAGGTCCCT-CGTGACATCCTTG-AAGTGGTCTCTTCCACTGGAA 331 Query 206 TCTCTCTTT 214 ||||||||| Sbjct 332 TCTCTCTTT 340 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36871863898 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5