BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg347652
Length=1680
Score E
Sequences producing significant alignments: (Bits) Value
AT3G45660.1 | Symbols: | Major facilitator superfamily protein... 1744 0.0
AT3G45650.1 | Symbols: NAXT1 | nitrate excretion transporter1 |... 1423 0.0
AT3G45710.1 | Symbols: | Major facilitator superfamily protein... 302 9e-81
AT3G45700.1 | Symbols: | Major facilitator superfamily protein... 235 1e-60
AT3G45690.1 | Symbols: | Major facilitator superfamily protein... 172 8e-42
> AT3G45660.1 | Symbols: | Major facilitator superfamily protein
| chr3:16762205-16764241 FORWARD LENGTH=1674
Length=1674
Score = 1744 bits (944), Expect = 0.0
Identities = 1193/1309 (91%), Gaps = 34/1309 (3%)
Strand=Plus/Plus
Query 378 GACCCCAAGCCTGCG-TA-A-CA--AAA--TATGCCAAGCCCCTACGAACATCCAGCTCG 430
||||||||||||||| | | || ||| |||| |||||||||||||||||||||||||
Sbjct 359 GACCCCAAGCCTGCGAAACAGCATCAAAGTTATGTCAAGCCCCTACGAACATCCAGCTCG 418
Query 431 GTGTCCTTTACACGGCAATAACTTTAGGCTCTGTGGGAGCAGGTGGGCTGCGGTTCACCT 490
||||||||||||| ||||||||| |||||| |||||||||||||||||| ||||| ||||
Sbjct 419 GTGTCCTTTACACAGCAATAACTCTAGGCTGTGTGGGAGCAGGTGGGCTACGGTTTACCT 478
Query 491 TGGCCACCGCTGGTGCGAACCAGTATGAAAAAACTGAAGACCAAGGCAGCTTTTTCAACT 550
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 479 TGGCCACCGCTGGTGCGAACCAGTACGAAAAAACTAAAGACCAAGGCAGCTTTTTCAACT 538
Query 551 GTTTTTTCTTCACATGGTATCTAGCTGCCTCTATAAGTGTAACAGCCATTGTCTACACCG 610
| |||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||
Sbjct 539 GGTTTTTCTTCACATGGTATTTAGCTGCCTCTATAAGTGCAACAGCCATTGTCTACGCCG 598
Query 611 AAGAAAACATCAGCTGGAGTTTTGGGTTTGGTTTATGTGTAGCTGCTAATCTGTTAGGCT 670
|||||||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||
Sbjct 599 AAGAAAACATTAGCTGGAGTTTCGGGTTTGGTCTGTGTGTAGCTGCTAATCTGTTAGGCT 658
Query 671 TGATGGTTTTCATCTCGGGGAAAAGATTCTACAAGCATGAGTGCATGACAAGCCTTTGGG 730
|||| ||||||||||||||||||| ||||| | || | ||||||||||||||||||
Sbjct 659 TGATAGTTTTCATCTCGGGGAAAAAATTCT---A-CA--A--GCATGACAAGCCTTTGGG 710
Query 731 AAGTCCCTTCACAAGTTTACTTCGCGTCATCTTTTCTG-CATTACTTAAAAGAAAAGCTG 789
|||||||||||||||||||||||| |||||||| ||| || ||| ||||||||||||||
Sbjct 711 AAGTCCCTTCACAAGTTTACTTCGTGTCATCTTCGCTGCCA-TACGTAAAAGAAAAGCTG 769
Query 790 TGGTTTCCACCAACGAGAAAGACTACCACAGTGAATCAAAGAAGCCGCCAAC-AA-AG-- 845
||||||||||||||||||||||||||||||||||||||||||| |||| || || ||
Sbjct 770 TGGTTTCCACCAACGAGAAAGACTACCACAGTGAATCAAAGAAAACGCCCACAAAGAGTT 829
Query 846 --A-G---TTT-------CAGCATTGAAACAGGATGATGAGGTTAATGCAGACAGCACAA 892
| | ||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 830 TCAGGTTCTTTAACCGCGCAGCATTGAAACAGGATGATGAGGTTAATTCAGACGGCACAA 889
Query 893 TTCGCAATCAATGGAGACTATGCAGCGTTAAACAAGTGGAAGATTTCAAAGCAGTCATAA 952
||| ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 890 TTCACAATCAATGGAGACTATGCAGCGTTCAACAAGTAGAAGATTTCAAAGCAGTCATAA 949
Query 953 GAATAATCCCTCTTGTGTTAGCCATAATATTCTTGAGCACTCCAATAGCGATGCAGCTAG 1012
|||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||
Sbjct 950 GAATCATCCCTCTTGTGTTAGCTATATTATTCTTGAGCACTCCAATCGCGATGCAGCTAG 1009
Query 1013 GCTTAACAGTACTTCAAGGTCTGGTGATGGACCGGAGACTTGGCCCTCACTTCAAAATCC 1072
| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1010 GATTAACAGTACTTCAGGGTCTGGTGATGGACCGGAGACTTGGCCCTCACTTCAAGATCC 1069
Query 1073 CTGCAGGCTCTCTCCAAGTCATAACACTTCTCTCCACTTGCCTGTTTCTCATAGTCAACG 1132
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1070 CTGCAGGCTCTCTCCAAGTCATAACACTTCTCTCCACTTGCCTATTTATCATAGTCAACG 1129
Query 1133 ATCGGTTTCTCTACCCATTTTACCAAAAACTAACCGGAAAGTTCCCCACACCGATACAAA 1192
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1130 ATCGGTTTCTCTACCCATTTTACCAAAAACTAACCGGGAAGTTCCCCACACCGATTCAAA 1189
Query 1193 GGGTGGGAATAGGCCATGTTTTCAACATTATAAGCATGGCCATGACTGCCATAGTTGAAG 1252
|||||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||
Sbjct 1190 GGGTGGGAATAGGCCACGTTTTCAACATTCTAAGCATGGCTGTGACTGCCATAGTTGAAG 1249
Query 1253 CAAAAAGATTAAAGATAGTACAGAACGTTAATCTTCTTGAATCATCATCCGTTGCTGACA 1312
|||| |||| |||||||||||||| | | || |||| | ||||||||| ||||||||||
Sbjct 1250 CAAAGCGATTGAAGATAGTACAGAAAGGTCATTTTCTCGGATCATCATCTGTTGCTGACA 1309
Query 1313 TGTCAGTCTTGTGGTTATTCCCTCCTCTAGTCATAGTAGGAATCGGAGAGGCCTTCCATT 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1310 TGTCAGTCTTGTGGTTATTCCCTCCTCTAGTCATAGTAGGAATCGGAGAGGCCTTCCATT 1369
Query 1373 TCCCAGGGAATGTAGCTCTATGCTATCAAGAATTTCCAGAGTCTATGAGAAGCCCCGCAA 1432
||||||||||||||||||| ||||||||||| ||||||||||||||| |||| | || |
Sbjct 1370 TCCCAGGGAATGTAGCTCTGTGCTATCAAGAGTTTCCAGAGTCTATGCGAAGTACTGCGA 1429
Query 1433 CATCGATCACCTCGGTGGTGATTGGGATATGCTTCTACACAAGCACTGCTTTGATCGATC 1492
|||| || ||||||||| ||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1430 CATCAATAACCTCGGTGTTGATTGGGATATGTTTCTACACAAGCACTGCTTTGATCGACC 1489
Query 1493 TGATTCAGAGGACAACCGCGTGGTTACCAGATGACATAAACCATGGAAGAGTTGACAATG 1552
||||||| | ||| || || |||||||||||||| || ||||||||||||||||||||||
Sbjct 1490 TGATTCAAAAGACCACTGCATGGTTACCAGATGATATTAACCATGGAAGAGTTGACAATG 1549
Query 1553 TTTACTGGGTTTTAGTTATAGGAGGAGTCTTGAATCTTGGCTATTTTCTTGTGTGTTCTT 1612
|||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1550 TTTACTGGATTTTAGTCATAGGAGGAGTCTTGAATCTTGGCTATTTCCTTGTGTGTTCTT 1609
Query 1613 GGTTTTACAAATACAGAAACCTCAAGAATGATGATCATGAGCAAGATGC 1661
||||||| ||||||||||||||| |||||| ||||||||| ||||||||
Sbjct 1610 GGTTTTATAAATACAGAAACCTCGAGAATGCTGATCATGAACAAGATGC 1658
Score = 121 bits (65), Expect = 3e-26
Identities = 89/101 (88%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 1 ATGGCTGGTTTTGTTTCCCATGATGCAGAAGCACCGATTTCAGCAGATTCTAGTACCAGA 60
||| |||||| ||||||| ||||||||||| | || |||||||||||||| ||||||
Sbjct 1 ATGTCTGGTTCAGTTTCCCGCGATGCAGAAGCTCTGAAGTCAGCAGATTCTAGCACCAGA 60
Query 61 CGCTCTGGCGGCAGGATCACCTTTCCGTTTATGATAGCAAC 101
||||||||||||||||||||||| ||||||||||||| |||
Sbjct 61 CGCTCTGGCGGCAGGATCACCTTCCCGTTTATGATAGTAAC 101
> AT3G45650.1 | Symbols: NAXT1 | nitrate excretion transporter1
| chr3:16759253-16761266 FORWARD LENGTH=1677
Length=1677
Score = 1423 bits (770), Expect = 0.0
Identities = 1122/1287 (87%), Gaps = 43/1287 (3%)
Strand=Plus/Plus
Query 401 TATGCCAAG-CCCCTACGAACATCCAGCTCGGTGTCCTTTACACGGCAATAACTTTAGGC 459
|||||| || | ||| |||| | ||||||||| |||||||||||||| |||||| ||| |
Sbjct 392 TATGCC-AGTCTCCTTCGAAAACCCAGCTCGGAGTCCTTTACACGGCCATAACTCTAGCC 450
Query 460 TCTGTGGGAGCAGGTGGG-CTGCGGTTCACCTTGGCCACCGCTGGTGCGAACCAGTATGA 518
||| | ||| |||||||| | |||||||| || || || ||||||||||||||||||||
Sbjct 451 TCTATAGGAACAGGTGGGAC-ACGGTTCACATTAGCAACTGCTGGTGCGAACCAGTATGA 509
Query 519 AAAAACTGAAGACCAAGGCAGCTTTTTCAACTGTTTTTTCTTCACATGGTATCTAGCTGC 578
||||||| |||||||||| |||||||||||||| |||||||||||| |||||||| |
Sbjct 510 AAAAACTAAAGACCAAGGAAGCTTTTTCAACTGGTTTTTCTTCACAACATATCTAGCCGG 569
Query 579 CTCTATAAGTGTAACAGCCATTGTCTACACCGAAGAAAACATCAGCTGGAGTTTTGGGTT 638
||||||||| ||| |||||||||||||||||||| || |||||||||| |||||||
Sbjct 570 AGCTATAAGTGCAACCGCCATTGTCTACACCGAAGACAATATCAGCTGGACCCTTGGGTT 629
Query 639 TGGTTTATGTGTAGCTGCTAATCTGTT-AGGCTTGATGGTTTTCATCTCGGGGAAAAGAT 697
|||| | | |||||| |||||| | || | | || |||||||| |||||||||||||||
Sbjct 630 TGGTCTGTCTGTAGCCGCTAATTTCTTCA-GTTTTTTGGTTTTCGTCTCGGGGAAAAGAT 688
Query 698 TCTACAAGCATGAGTGCATGACAAGCCTTTGGGAAGTCCCTTCACAAGTTTACT-TCGCG 756
||| | || | |||||||||||||||||||||||||||||||||| |||| | |||
Sbjct 689 TCT---A-CA--A--GCATGACAAGCCTTTGGGAAGTCCCTTCACAAGTCTACTAT-GCG 739
Query 757 TCATCTTT-TCTGCATTACTTAAAAGAAAAGCTGTGGTTTCCACCAACGAGAAAGACTAC 815
|||| ||| | ||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 740 TCAT-TTTCGCAGCATTACGCAAAAGAAAAGCTGTGGTTTCCACCAACGAAAAAGACTAC 798
Query 816 CACAGTGAATCAA--AGAA-GCCGC-CAACAAAG----A-G----TT-----T-CAGCAT 856
|||| |||||||| | || ||| | ||| | || | | || | ||||||
Sbjct 799 CACAATGAATCAATCACAATGCC-CACAA-AGAGTTTCAGGTTCTTTAACCGTGCAGCAT 856
Query 857 TGAAACAGGATGATGAGGTTAATGCAGACAGCACAATTCGCAATCAATGGAGACTATGCA 916
|||||||||| || ||||| || |||| ||||||||||||||| ||||||||||||||
Sbjct 857 TGAAACAGGAAGACGAGGTAAAACCAGATGGCACAATTCGCAATCCATGGAGACTATGCA 916
Query 917 GCGTTAAACAAGTGGAAGATTTCAAAGCAGTCATAAGAATAATCCCTCTTGTGTTAGCCA 976
||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||
Sbjct 917 GCGTTCAACAAGTGGAAGATTTCAAAGCAGTCATAAGAATCATCCCTCTCGCCTTAGCCA 976
Query 977 TAATATTCTTGAGCACTCCAATAGCGATGCAGCTAGGCTTAACAGTACTTCAAGGTCTGG 1036
||||||||||||||||||||| || ||||| ||| |||||||||| |||||||||||||
Sbjct 977 CAATATTCTTGAGCACTCCAATCGCAATGCAACTAAGCTTAACAGTTCTTCAAGGTCTGG 1036
Query 1037 TGATGGACCGGAGACTTGGCCCTCA-CTTCAAAATCCCTGCAGGCTCTCTCCAAGTCATA 1095
||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||||||||
Sbjct 1037 TGATGGACCGGAGGCTTGGTCCT-AGCTTCAAAATCCCTGCAGGCTCTCTCCAAGTCATA 1095
Query 1096 ACACTTCTCTCCACTTGCCTGTTTCTCATAGTCAACGATCGGTTTCTCTACCCATTTTAC 1155
|||||||||||||||||||| ||| |||||||||||||| || ||||||| |||||||||
Sbjct 1096 ACACTTCTCTCCACTTGCCTATTTATCATAGTCAACGATAGGGTTCTCTATCCATTTTAC 1155
Query 1156 CAAAAACTAACCGGAAAGTTCCCCACACCGATACAAAG-GGTGGGAATAGGCCATGTTTT 1214
||||| |||| |||||| || ||||||| | ||| | | |||| |||||||||| ||
Sbjct 1156 CAAAAGTTAACGGGAAAGCACCTCACACCGCTCCAACGAGTTGGG-ATAGGCCATGCGTT 1214
Query 1215 CAACATTATAAGCATGGCCATGACTGCCATAGTTGAAGCAAAAAGATTAAAGATAGTACA 1274
||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct 1215 CAACATTCTAAGCATGGCTGTGACTGCCATAGTTGAAGCAAAGCGATTAAAGATAGTACA 1274
Query 1275 GAACGTTAATCTTCTTGAATCATCATCCGTTGCTGACATGTCAGTCTTGTGGTTATTCCC 1334
||| | | || |||| | ||||||||| |||||||||||||||||||| ||| | |||||
Sbjct 1275 GAAGGGTCATTTTCTCGGATCATCATCTGTTGCTGACATGTCAGTCTTATGGCTCTTCCC 1334
Query 1335 TCCTCTAGTCATAGTAGGAATCGGAGAGGCCTTCCATTTCCCAGGGAATGTAGCTCTATG 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1335 TCCTCTAGTCATAGTAGGAATCGGAGAGGCCTTCCATTTCCCAGGGAATGTAGCTCTGTG 1394
Query 1395 CTATCAAGAATTTCCAGAGTCTATGAGAAGCCCCGCAACATCGATCACCTCGGTGGTGAT 1454
||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 1395 CTATCAAGAGTTTCCAGAGTCTATGAGAAGCACCGCAACATCGATAACCTCGGTGGTGAT 1454
Query 1455 TGGGATATGCTTCTACACAAGCACTGCTTTGATCGATCTGATTCAGAGGACAACCGCGTG 1514
||||||||| ||||||||||||||||||||||| ||||||||||| ||||| || |||||
Sbjct 1455 TGGGATATGTTTCTACACAAGCACTGCTTTGATAGATCTGATTCAAAGGACCACGGCGTG 1514
Query 1515 GTTACCAGATGACATAAACCATGGAAGAGTTGACAATGTTTACTGGGTTTTAGTTATAGG 1574
|||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 1515 GTTACCAGATGACATAAACCATGGAAGAGTTGACAATGTTTACTGGATTTTAGTCATAGG 1574
Query 1575 AGGAGTCTTGAATCTTGGCTATTTTCTTGTGTGTTCTTGGTTTTACAAATACAGAAACCT 1634
|||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||
Sbjct 1575 AGGAGTCTTGAATCTTGGCTATTTTCTTGTGTGTTCTTGGCTATACAGATACAGAAACCT 1634
Query 1635 CAAGAATGATGATCATGAGCAAGATGC 1661
|||| ||||||||||| |||||| |||
Sbjct 1635 CAAGGATGATGATCATAAGCAAGCTGC 1661
> AT3G45710.1 | Symbols: | Major facilitator superfamily protein
| chr3:16782643-16784735 FORWARD LENGTH=1877
Length=1877
Score = 302 bits (163), Expect = 9e-81
Identities = 296/358 (83%), Gaps = 18/358 (5%)
Strand=Plus/Plus
Query 1311 CATGTCAGT-CTTGTGGTTA-TTCCCTCCTCTAGTCATAGTAGGAATCGGAGAGGCCTTC 1368
||||||||| | | ||| || || ||| |||| || || || ||||| || ||||| ||
Sbjct 1390 CATGTCAGTGC-TATGGCTAGTT-CCTGCTCTTGTGATGGTTGGAATAGGCGAGGCGTTT 1447
Query 1369 CA-TTTCCCAGGGAATGTAGCTCTATGCTATCAAGAATTTCCAGAGTCTATG-AGAAGCC 1426
|| |||||| | |||||| || ||| |||| |||||| || |||||| || |||| |
Sbjct 1448 CATTTTCCC-GCGAATGTTGCAGTATTCTATGGAGAATTCCCTGAGTCTCTGAAGAA-CA 1505
Query 1427 CCGCAACATCGA-TCACCTCGGTGGTGATTGGGATATGC-TTCTACAC-AAGCACTGCT- 1482
||||||| || | | ||||| ||||||||||| || | | ||||| | ||||| |||
Sbjct 1506 CCGCAACTTC-ATTGACCTCAGTGGTGATTGGAATCT-CTTTCTA-TCTGAGCACAGCTG 1562
Query 1483 TTGATCGATC-TGATTCAGAGGACAACCGCGTGGTTACCAGATGACATAAACCATGGAAG 1541
|| ||||| | |||| || || || ||| ||||||||||| |||||||||||||||||||
Sbjct 1563 TT-ATCGA-CGTGATCCAAAGAACCACCTCGTGGTTACCAAATGACATAAACCATGGAAG 1620
Query 1542 AGTTGACAATGTTTACTGGGTTTTAGTTATAGGAGGAGTCTTGAATCTTGGCTATTTTCT 1601
|||||||||||||||||||||| |||| |||||||||||||||||||| |||||||| ||
Sbjct 1621 AGTTGACAATGTTTACTGGGTTGTAGTCATAGGAGGAGTCTTGAATCTCGGCTATTTCCT 1680
Query 1602 TGTGTGTTCTTGGTTTTACAAATACAGAAACCTCAAGAATGATGATCATGAGCAAGAT 1659
||| || |||||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct 1681 TGTCTGCTCTTGGTTTTACAAATACAGAAACCTCAAGGATGATGATCATGAACAAGAT 1738
> AT3G45700.1 | Symbols: | Major facilitator superfamily protein
| chr3:16778713-16781198 FORWARD LENGTH=1829
Length=1829
Score = 235 bits (127), Expect = 1e-60
Identities = 290/365 (79%), Gaps = 25/365 (7%)
Strand=Plus/Plus
Query 1311 CATGTCAGT-CTTGTGG-TTATTCCCTCCTCTAGTCA-TAGTAGGAATCGGAGAGGCCTT 1367
||||||||| | | ||| | || ||| |||| || | || | ||||| || ||||||||
Sbjct 1330 CATGTCAGTGC-TATGGCTGGTT-CCTGCTCTCGTGATTAAT-GGAATAGGTGAGGCCTT 1386
Query 1368 CCATTTCCCAGGGAATGTAGCTCTATGCTATCAAGAATTTCCAGAGTCTATGA-GAAGCC 1426
||||| |||| ||| | || ||| |||| |||||| || |||||| | | ||| |
Sbjct 1387 TCATTTTCCAGCAAATATTGCAATATTCTATGGAGAATTCCCTGAGTCTCTAAGGAA-CA 1445
Query 1427 CCGCAACATCGA-TCACCTCGGTGGTGATTGGG-ATATGC-TTCTACAC-AAGCACTGCT 1482
| || || || | | ||||||||||||| |||| || | | ||||| | ||||| |||
Sbjct 1446 CAGCGACTTC-ATTGACCTCGGTGGTGA-TGGGAATCT-CTTTCTA-TCTGAGCACAGCT 1501
Query 1483 -TTGATCGATCTGATTCAGAGGACAACCGCGTGGTTACCAGATGACATAAACCATGGAAG 1541
|| |||||| |||| |||||||| ||| |||||||||| ||||||||||||| |||||
Sbjct 1502 CTT-ATCGATGTGATCCAGAGGACCACCAAGTGGTTACCAAATGACATAAACCACGGAAG 1560
Query 1542 AGTTGACAATGTTTACTGGGTTTTAGTTA-TAGGAGGAGTCT-TGAATCTT-GGCTATTT 1598
|||||||||||||||| ||| ||||| | || |||||||| | ||| || ||||| ||
Sbjct 1561 GGTTGACAATGTTTACTTGGTATTAGTCATTA-TAGGAGTCTCT-AAT-TTCGGCTACTT 1617
Query 1599 TCTTGTGTGTTCTTGGTTTTACAAATACAGAAACCTCAAGAATGATGATCATGAGCAAGA 1658
||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1618 CCTTGTCTGCTCTTGGTTTTACAAATACAGAAACCTCAAGAATGATGATCATGAACAAGA 1677
Query 1659 TGCTT 1663
| |||
Sbjct 1678 T-CTT 1681
> AT3G45690.1 | Symbols: | Major facilitator superfamily protein
| chr3:16776268-16778150 FORWARD LENGTH=1551
Length=1551
Score = 172 bits (93), Expect = 8e-42
Identities = 183/224 (82%), Gaps = 15/224 (7%)
Strand=Plus/Plus
Query 1442 CCTCGGTGGTGATTGGGATATGC-TTCTACAC-AAGCACTGCTTTGATCGA-TCTGATTC 1498
|||| ||||||||||| |||| | |||||| | ||||| ||| ||||| | |||||| |
Sbjct 1316 CCTCAGTGGTGATTGGAATAT-CTTTCTAC-CTGAGCACAGCTCTGATC-ACTCTGATCC 1372
Query 1499 AGAGGACAACCGCGTGGTTACCAGATGACATAAACCATGGAAGAGTTGACAATGTTTACT 1558
||| ||| ||| |||||||||| |||| || ||||||||||||||||||||||||||||
Sbjct 1373 AGAAGACCACCAAGTGGTTACCAAATGATATTAACCATGGAAGAGTTGACAATGTTTACT 1432
Query 1559 GGGTTTTAGTTATAGGAGGAGTCTTGAATCTTGGCTATTTTCTTGTGTGTTCTTGGTTTT 1618
|| ||||||| || | |||||||||||| || |||| ||||| || |||||||||
Sbjct 1433 GGCTTTTAGTCATTGTAGGAGTCTTGAA-CT-----ATTTCCTTGTCTGCGCTTGGTTTT 1486
Query 1619 ACAAATACAGAAACCTCAA-GA--ATGATGATCATGAGCAAGAT 1659
||| ||| |||||||| || || |||||||||| || ||||||
Sbjct 1487 ACAGATATAGAAACCTGAATGATGATGATGATCAGGAACAAGAT 1530
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 83031701430
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5