BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg347751
Length=753
Score E
Sequences producing significant alignments: (Bits) Value
AT3G46658.1 | Symbols: | other RNA | chr3:17188870-17191167 FO... 375 2e-103
AT3G46660.1 | Symbols: UGT76E12 | UDP-glucosyl transferase 76E1... 375 2e-103
AT3G46670.1 | Symbols: UGT76E11 | UDP-glucosyl transferase 76E1... 363 2e-99
AT5G37950.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 204 1e-51
AT5G38010.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 158 9e-38
> AT3G46658.1 | Symbols: | other RNA | chr3:17188870-17191167
FORWARD LENGTH=2026
Length=2026
Score = 375 bits (203), Expect = 2e-103
Identities = 265/294 (90%), Gaps = 7/294 (2%)
Strand=Plus/Minus
Query 435 AGAAAGCACAATGGAGCTGTATAGGAATACAGTTGACAAACGGACAGCTTCATCTGTGAT 494
||| |||| ||||||| |||||||||||||||||||||||||||||||||| || |||||
Sbjct 1060 AGAGAGCATAATGGAGGTGTATAGGAATACAGTTGACAAACGGACAGCTTCCTCGGTGAT 1001
Query 495 AATCAACACTGCGAGCTGTCTAGAGAG-TGCATCTCTGTCATTTCTGCAACAACA---GC 550
||||||||||||||||||||||||||| | |||||||||| |||||||||||||| ||
Sbjct 1000 AATCAACACTGCGAGCTGTCTAGAGAGCT-CATCTCTGTCTTTTCTGCAACAACAACAGC 942
Query 551 TAAAAATTCCAGTGTATCCTATAGGCCCTCTTCACCTGGTGGCCTCGGCTTCTACAAGTC 610
|| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||
Sbjct 941 TACAAATTCCAGTGTATCCTATAGGCCCTCTTCACATGGTGGCCTCAGCTCCTACAAGTC 882
Query 611 TGCTTGAAGAGAACAAAAGTTGTATGGAATGGTTGAACAAACAAAAGGTAAACTCAGTGA 670
|||||||||||||||| || || || ||||||||||||||||||||||||||||| ||||
Sbjct 881 TGCTTGAAGAGAACAAGAGCTGCATCGAATGGTTGAACAAACAAAAGGTAAACTCGGTGA 822
Query 671 TATACATAAGCTTGGGAAGC-TATGCTTTAACAGAAATTAATGAGGTGATGGAA 723
||||||||||| |||||||| || ||||||| ||||| || ||| | ||||||
Sbjct 821 TATACATAAGCATGGGAAGCATA-GCTTTAATGGAAATCAACGAGATAATGGAA 769
Score = 348 bits (188), Expect = 5e-95
Identities = 264/301 (88%), Gaps = 4/301 (1%)
Strand=Plus/Minus
Query 138 CACTATTCCGGAAAGCTTACCGGAGTCTGCTTTTGAGGATCTCGGGGCACTAAAATTTCT 197
||| ||||| ||||||||||| ||||||| ||| || ||||||| || || | |||||
Sbjct 1524 CACCATTCCAGAAAGCTTACCAGAGTCTGATTTCAAGAATCTCGGACCAATACAGTTTCT 1465
Query 198 GCTTAAGCTCAACATAGAGTGCCAGGTGAGCTTCAAGGACTGCTTGGGTCAGTTGCTGCT 257
| |||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||
Sbjct 1464 GTTTAAGCTCAACAAAGAGTGTAAGGTGAGCTTCAAGGACTGTTTGGGTCAGTTGGTGCT 1405
Query 258 GCAACAAAGTAATGAGATCTCATGTGTCATCTACGACGAGTTCTTGTACTTTGCTGAAGC 317
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 1404 GCAACAAAGTAATGAGATCTCATGTGTCATCTACGATGAGTTCATGTACTTTGCTGAAGC 1345
Query 318 TGCAGCCAAAGAGTTTAAGCTTCCAAACGTTATTTTCAGCACAACAAGTGCCACGGCTTT 377
|||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 1344 TGCAGCCAAAGAGTGTAAGCTTCCAAACATCATTTTCAGCACAACAAGTGCCACGGCTTT 1285
Query 378 TGTTTGTCGCTCTGTATTCAACAA-CGTCTATGGAAACAACGGC-ATAGCTCCCTCGAAA 435
| ||| ||||||||||| |||| | | |||| |||||| | | | |||||||| ||||
Sbjct 1284 CGCTTGCCGCTCTGTATTTGACAAAC-TATATGCAAACAATGTCCA-AGCTCCCTTGAAA 1227
Query 436 G 436
|
Sbjct 1226 G 1226
Score = 137 bits (74), Expect = 1e-31
Identities = 113/131 (86%), Gaps = 5/131 (4%)
Strand=Plus/Minus
Query 1 ATGGAGGAAAAGCAGGCGAGAAAAAGGGTCGTGTTGGTTTCAGTTT-CAGCTCAAGGACA 59
||||||||||||| || || | ||| || ||||||||| || ||| |||| ||||||||
Sbjct 1706 ATGGAGGAAAAGCCTGCAAGGAGAAGCGTAGTGTTGGTTCCA-TTTCCAGCACAAGGACA 1648
Query 60 TATATCTCCAATGATGCAACTTGCGAAAACCCTTCA-TTCGAAGGGGTTTCTCAATCACA 118
|||||||||||||||||||||||| ||||||||||| || ||||| |||||| ||||||
Sbjct 1647 TATATCTCCAATGATGCAACTTGCCAAAACCCTTCACTTA-AAGGG-TTTCTCGATCACA 1590
Query 119 GTTTTTCAGAC 129
||| |||||||
Sbjct 1589 GTTGTTCAGAC 1579
> AT3G46660.1 | Symbols: UGT76E12 | UDP-glucosyl transferase 76E12
| chr3:17189264-17191167 REVERSE LENGTH=1824
Length=1824
Score = 375 bits (203), Expect = 2e-103
Identities = 265/294 (90%), Gaps = 7/294 (2%)
Strand=Plus/Plus
Query 435 AGAAAGCACAATGGAGCTGTATAGGAATACAGTTGACAAACGGACAGCTTCATCTGTGAT 494
||| |||| ||||||| |||||||||||||||||||||||||||||||||| || |||||
Sbjct 887 AGAGAGCATAATGGAGGTGTATAGGAATACAGTTGACAAACGGACAGCTTCCTCGGTGAT 946
Query 495 AATCAACACTGCGAGCTGTCTAGAGAG-TGCATCTCTGTCATTTCTGCAACAACA---GC 550
||||||||||||||||||||||||||| | |||||||||| |||||||||||||| ||
Sbjct 947 AATCAACACTGCGAGCTGTCTAGAGAGCT-CATCTCTGTCTTTTCTGCAACAACAACAGC 1005
Query 551 TAAAAATTCCAGTGTATCCTATAGGCCCTCTTCACCTGGTGGCCTCGGCTTCTACAAGTC 610
|| |||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||
Sbjct 1006 TACAAATTCCAGTGTATCCTATAGGCCCTCTTCACATGGTGGCCTCAGCTCCTACAAGTC 1065
Query 611 TGCTTGAAGAGAACAAAAGTTGTATGGAATGGTTGAACAAACAAAAGGTAAACTCAGTGA 670
|||||||||||||||| || || || ||||||||||||||||||||||||||||| ||||
Sbjct 1066 TGCTTGAAGAGAACAAGAGCTGCATCGAATGGTTGAACAAACAAAAGGTAAACTCGGTGA 1125
Query 671 TATACATAAGCTTGGGAAGC-TATGCTTTAACAGAAATTAATGAGGTGATGGAA 723
||||||||||| |||||||| || ||||||| ||||| || ||| | ||||||
Sbjct 1126 TATACATAAGCATGGGAAGCATA-GCTTTAATGGAAATCAACGAGATAATGGAA 1178
Score = 353 bits (191), Expect = 1e-96
Identities = 267/304 (88%), Gaps = 4/304 (1%)
Strand=Plus/Plus
Query 138 CACTATTCCGGAAAGCTTACCGGAGTCTGCTTTTGAGGATCTCGGGGCACTAAAATTTCT 197
||| ||||| ||||||||||| ||||||| ||| || ||||||| || || | |||||
Sbjct 503 CACCATTCCAGAAAGCTTACCAGAGTCTGATTTCAAGAATCTCGGACCAATACAGTTTCT 562
Query 198 GCTTAAGCTCAACATAGAGTGCCAGGTGAGCTTCAAGGACTGCTTGGGTCAGTTGCTGCT 257
| |||||||||||| |||||| ||||||||||||||||||| |||||||||||| ||||
Sbjct 563 GTTTAAGCTCAACAAAGAGTGTAAGGTGAGCTTCAAGGACTGTTTGGGTCAGTTGGTGCT 622
Query 258 GCAACAAAGTAATGAGATCTCATGTGTCATCTACGACGAGTTCTTGTACTTTGCTGAAGC 317
|||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 623 GCAACAAAGTAATGAGATCTCATGTGTCATCTACGATGAGTTCATGTACTTTGCTGAAGC 682
Query 318 TGCAGCCAAAGAGTTTAAGCTTCCAAACGTTATTTTCAGCACAACAAGTGCCACGGCTTT 377
|||||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 683 TGCAGCCAAAGAGTGTAAGCTTCCAAACATCATTTTCAGCACAACAAGTGCCACGGCTTT 742
Query 378 TGTTTGTCGCTCTGTATTCAACAA-CGTCTATGGAAACAACGGC-ATAGCTCCCTCGAAA 435
| ||| ||||||||||| |||| | | |||| |||||| | | | |||||||| ||||
Sbjct 743 CGCTTGCCGCTCTGTATTTGACAAAC-TATATGCAAACAATGTCCA-AGCTCCCTTGAAA 800
Query 436 GAAA 439
||||
Sbjct 801 GAAA 804
Score = 137 bits (74), Expect = 1e-31
Identities = 113/131 (86%), Gaps = 5/131 (4%)
Strand=Plus/Plus
Query 1 ATGGAGGAAAAGCAGGCGAGAAAAAGGGTCGTGTTGGTTTCAGTTT-CAGCTCAAGGACA 59
||||||||||||| || || | ||| || ||||||||| || ||| |||| ||||||||
Sbjct 321 ATGGAGGAAAAGCCTGCAAGGAGAAGCGTAGTGTTGGTTCCA-TTTCCAGCACAAGGACA 379
Query 60 TATATCTCCAATGATGCAACTTGCGAAAACCCTTCA-TTCGAAGGGGTTTCTCAATCACA 118
|||||||||||||||||||||||| ||||||||||| || ||||| |||||| ||||||
Sbjct 380 TATATCTCCAATGATGCAACTTGCCAAAACCCTTCACTTA-AAGGG-TTTCTCGATCACA 437
Query 119 GTTTTTCAGAC 129
||| |||||||
Sbjct 438 GTTGTTCAGAC 448
> AT3G46670.1 | Symbols: UGT76E11 | UDP-glucosyl transferase 76E11
| chr3:17192589-17194397 REVERSE LENGTH=1732
Length=1732
Score = 363 bits (196), Expect = 2e-99
Identities = 265/298 (89%), Gaps = 6/298 (2%)
Strand=Plus/Plus
Query 435 AGAAAGCACAATGGAGCTGTATAGGAATACAGTTGACAAACGGACAGCTTCATCTGTGAT 494
|||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 734 AGAAAGCATGATGGAGCTGTATAGGAATACAGTTGACAAACGGACAGCTTCCTCGGTGAT 793
Query 495 AATCAACACTGCGAGCTGTCTAGAGAG-TGCATCTCTGTCATT-TCTGCAACAACAGCTA 552
||||||||| ||||||||||||||||| | |||||||||| | |||||| |||||||||
Sbjct 794 AATCAACACAGCGAGCTGTCTAGAGAGCT-CATCTCTGTC-TCGTCTGCAGCAACAGCTA 851
Query 553 AAAATTCCAGTGTATCCTATAGGCCCTCTTCACCTGGTGGCCTCGGCTTCTACAAGTCTG 612
|||||||||| ||||||||||||||||||||||||||||| || |||||||| |||||
Sbjct 852 CAAATTCCAGTTTATCCTATAGGCCCTCTTCACCTGGTGGCATCAGCTTCTACGAGTCTT 911
Query 613 CTTGAAGAGAACAAAAGTTGTATGGAATGGTTGAACAAACAAAAGGTAAACTCAGTGATA 672
|||||||||||||| || ||||| ||||||||||||||||||||| |||||| ||||||
Sbjct 912 CTTGAAGAGAACAAGAGCTGTATTGAATGGTTGAACAAACAAAAGAAAAACTCTGTGATA 971
Query 673 TACATAAGCTTGGGAAGCT-ATGCTTTAACAGAAATTAATGAGGTGATGGAAAGTGCT 729
| | ||||||||||||||| | ||||| | ||||| ||||||||||| |||| ||||
Sbjct 972 TTCGTAAGCTTGGGAAGCTTA-GCTTTGATGGAAATCAATGAGGTGATAGAAACTGCT 1028
Score = 351 bits (190), Expect = 4e-96
Identities = 253/284 (89%), Gaps = 2/284 (1%)
Strand=Plus/Plus
Query 133 TTTGCCACTATTCCGGAAAGCTTACCGGAGTCTGCTTTTGAGGATCTCGGGGCACTAAAA 192
|||| ||| ||||| ||||||||||| ||||||| |||||||||||||||| || || |
Sbjct 345 TTTGTCACCATTCCAGAAAGCTTACCAGAGTCTGATTTTGAGGATCTCGGGCCAATAGAG 404
Query 193 TTTCTGCTTAAGCTCAACATAGAGTGCCAGGTGAGCTTCAAGGACTGCTTGGGTCAGTTG 252
||||||| ||||||||||| |||||| |||||||||||||| ||||| ||||||||||||
Sbjct 405 TTTCTGCATAAGCTCAACAAAGAGTGTCAGGTGAGCTTCAAAGACTGTTTGGGTCAGTTG 464
Query 253 CTGCTGCAACAAAGTAATGAGATCTCATGTGTCATCTACGACGAGTTCTTGTACTTTGCT 312
||||||||||| |||||||||| | ||||| |||||||||||||| |||||||||||
Sbjct 465 TTGCTGCAACAAGGTAATGAGATAGCCTGTGTTGTCTACGACGAGTTCATGTACTTTGCT 524
Query 313 GAAGCTGCAGCCAAAGAGTTTAAGCTTCCAAACGTTATTTTCAGCACAACAAGTGCCACG 372
||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 525 GAAGCTGCAGCCAAAGAGTTTAAGCTTCCAAACGTCATTTTCAGCACCACAAGTGCCACG 584
Query 373 GCTTTTGTTTGTCGCTCTGTATTCAACAA-CGTCTATGGAAACA 415
||||||||||| ||||||| |||| |||| | | |||| |||||
Sbjct 585 GCTTTTGTTTGCCGCTCTGCATTCGACAAACTT-TATGCAAACA 627
> AT5G37950.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr5:15115883-15117617 FORWARD LENGTH=1267
Length=1267
Score = 204 bits (110), Expect = 1e-51
Identities = 198/238 (83%), Gaps = 16/238 (7%)
Strand=Plus/Plus
Query 200 TTAAGCTCAACATAGAGTGCCAGGTGAGCTTCAAGGACTGCTTGGGTCAGTTGCTGCTGC 259
|||| ||||||| |||||| | | ||||||||| | || || |||||||| ||||||
Sbjct 384 TTAAACTCAACAAAGAGTGTGAAATTAGCTTCAAGAAGTGTTTAGGTCAGTTTTTGCTGC 443
Query 260 AACAA-AGTAATGAGATCTCATGTGTCATCTACGACGAGTTCTTGTACTTTGCTGAAGCT 318
||||| || || |||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 444 AACAACAGGAA-GAGATCGCATGTGTCATCTACGACGAGTTCATGTACTTTGCTGAAGCT 502
Query 319 GCAGCCAAAGAGTTTAAGCTTCC-AAACGTTATTTTCAGCAC--AACAAGTGCCACGGCT 375
||||||||||||||||| ||||| ||| ||||||||||| || || || ||| ||||||
Sbjct 503 GCAGCCAAAGAGTTTAACCTTCCCAAA-GTTATTTTCAGTACCGAA-AA-TGCGACGGCT 559
Query 376 TTTGTTTGTCGCTCTGT-AT-T-CAACAACGTCTATGGAAACA-ACGGCATAGCTCCC 429
|||| ||||||||||| || | ||| | | |||||| ||| | | || |||||||||
Sbjct 560 TTTGCTTGTCGCTCTGCCATGTGCAA-A-C-TCTATGCAAA-AGATGGTATAGCTCCC 613
> AT5G38010.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr5:15158275-15160212 FORWARD LENGTH=1523
Length=1523
Score = 158 bits (85), Expect = 9e-38
Identities = 174/214 (81%), Gaps = 18/214 (8%)
Strand=Plus/Plus
Query 193 TTTCTGCTTAAGCTCAACATAGAGTGCCAGGTGAGCTTCAAGGACTGCTTGGGTCAGTTG 252
||||| ||||| ||||| | |||||| || | ||||||||||| || || ||||| |||
Sbjct 305 TTTCTTCTTAAACTCAATAAAGAGTGTGAGTTTAGCTTCAAGGAGTGTTTAGGTCAATTG 364
Query 253 CTGCTGC---AAC-A---A-A---GTA-ATGAGATCTCATGTGTCATCTACGACGAGTTC 300
|||||| ||| | | | | | | |||||| | |||||||||||||||||||||
Sbjct 365 TTGCTGCAAAAACAACTTATACCGGAAGAAGAGATCGCTTGTGTCATCTACGACGAGTTC 424
Query 301 TTGTACTTTGCTGAAGCTGCAGCCAAAGAGTTTAAGCTTCC-AAACGTTATTTTCAGCAC 359
|||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||
Sbjct 425 ATGTACTTTGCTGAAGCTGCAGCCAAAGAGTTTAACCTTCCCAAA-GTTATTTTCAGTAC 483
Query 360 --AACAAGTGCCACGGCTTTTGTTTGTCGCTCTG 391
|| || ||| |||||||||| |||||||||||
Sbjct 484 CGAA-AA-TGCGACGGCTTTTGCTTGTCGCTCTG 515
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 36570459016
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5