BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg347815
Length=2760
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1528 0.0
AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1221 0.0
AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase fa... 1212 0.0
> AT3G47090.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17341512-17344645 REVERSE LENGTH=3030
Length=3030
Score = 1528 bits (827), Expect = 0.0
Identities = 982/1057 (93%), Gaps = 10/1057 (1%)
Strand=Plus/Plus
Query 1709 TTTCTCTACGTTGGCTCAGAAAAAGAAAGAAGAACCAGAAGACCAATAATTCAGCTGCTT 1768
|||||||| | ||| ||| |||||||||||| |||||||||| ||||||||||||| |||
Sbjct 1979 TTTCTCTAAGCTGGTTCAAAAAAAGAAAGAACAACCAGAAGATCAATAATTCAGCTCCTT 2038
Query 1769 CTACATTGGAGATATTCCATGAGAAGATAAGTTATGGAGATCTACGAAATGCGACAGATG 1828
|||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 2039 TTACATTGGAGATTTTCCATGAAAAGCTAAGTTATGGAGATCTACGAAATGCGACAGATG 2098
Query 1829 GCTTCTCTGCGAGCAACATGGTTGGGTCAGGCAGTTTTGGTACTGTGTTTAAGGCATTAC 1888
|||||||| ||||||| || ||||||||||| |||||||||||||||||||||||||| |
Sbjct 2099 GCTTCTCTTCGAGCAATATAGTTGGGTCAGGTAGTTTTGGTACTGTGTTTAAGGCATTGC 2158
Query 1889 TCCCGGA-GGAGAACAAGATTGTTGCAGTGAAAGTTCTAAACATGGAGAGACGTGGAGCG 1947
| || || ||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2159 T-CCAGACGGAGAACAAGATTGTTGCAGTGAAAGTTCTAAACATGCAGAGACGTGGAGCT 2217
Query 1948 ATGAAGAGCTTTATGGCAGAATGTGAATCCTTGAAGGATATAAGGCATCGTAATCTTGTG 2007
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 2218 ATGAAGAGCTTTATGGCAGAATGTGAATCTTTGAAGGATATAAGGCATCGTAATCTCGTG 2277
Query 2008 AAACTATTGACAGCTTGTGCTAGTATTGATTTCCAAGGAAATGAATTCAGAGCTCTCATA 2067
||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct 2278 AAACTATTGACAGCTTGCGCTAGTATTGATTTCCAAGGTAACGAATTCAGAGCTCTCATC 2337
Query 2068 TACGAGTTCATGCCGAATGGAAGCTTGGATATGTGGCTGCACCCAGAGGAAATCGAAGAG 2127
|| |||||||||||||||||||| ||||||| |||||||||||||||||| ||||||||
Sbjct 2338 TATGAGTTCATGCCGAATGGAAGTTTGGATAAATGGCTGCACCCAGAGGAAGTCGAAGAG 2397
Query 2128 ATTCGCAGGCCCTCAAGAACCTTGACACTTCGTGAAAGGCTCAACATTGCCGTAGACGTG 2187
|||| |||||||||||||| |||||||||| ||||||||| ||||||||| ||||||||
Sbjct 2398 ATTCATAGGCCCTCAAGAACTTTGACACTTCTTGAAAGGCTTAACATTGCCATAGACGTG 2457
Query 2188 GCTTCTGTTTTGGACTATCTTCATGTTCATTGCCATGATCCTATAGCTCATTGTGATCTT 2247
||||||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||
Sbjct 2458 GCTTCTGTTTTGGACTATCTTCATGTTCACTGTCATGAGCCTATAGCTCATTGCGATCTT 2517
Query 2248 AAGCCAAGCAACGTACTTCTCGACGATGATCTAACTGCCCATGTTAGCGACTTTGGTCTG 2307
|||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2518 AAGCCAAGCAACATACTTCTCGACGATGATCTAACTGCCCATGTTAGCGACTTCGGTCTC 2577
Query 2308 GCTCGTCTTCTCCTCAAATTTGATCAGGAGTCCTTT-TTCAACCAACTAAGCTCAACTGG 2366
|||||||||||||||||||| || ||||||| |||| |||||||||||||||||| ||||
Sbjct 2578 GCTCGTCTTCTCCTCAAATTCGACCAGGAGT-CTTTCTTCAACCAACTAAGCTCAGCTGG 2636
Query 2367 TGTTAGAGGAACCATTGGGTATGCCGCACCAGAATATGGAATGGGAGGACAACCATCAAT 2426
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2637 TGTTAGAGGAACCATTGGGTATGCCGCACCAGAATATGGAATGGGAGGACAACCGTCAAT 2696
Query 2427 ACACGGTGATGTATACAGCTTTGGGGTACTCGTTTTGGAAATGTTCACAGGAAAACGACC 2486
||||||||||||||| ||||||||||| |||||||||||||||||||| |||||| ||||
Sbjct 2697 ACACGGTGATGTATATAGCTTTGGGGTTCTCGTTTTGGAAATGTTCACTGGAAAAAGACC 2756
Query 2487 AACCAATGAGCTATTT-GAGGGGAGCTTTACCCT-ACACAGCTACACC-AGATCAGCCTT 2543
|||||||||| ||||| || || | ||||||||| | ||||||||||| || | |||||
Sbjct 2757 AACCAATGAGTTATTTGGA-GGAAACTTTACCCTGA-ACAGCTACACCAAG-GCGGCCTT 2813
Query 2544 GCCAGAAAGAGTTTTGGACATTGCAGACAAATCGATTCTTCATAGTGGTCTCAGAGTTGG 2603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2814 GCCAGAAAGAGTTTTGGACATTGCAGACAAATCGATTCTTCATAGTGGTCTCAGAGTTGG 2873
Query 2604 TTTCCCTGTAGTGGAGTGTTTGAAAGTGATTTTGGATGTGGGACTTAGGTGTTGTGAAGA 2663
|||||||||| | ||||| ||||||| ||||||||||||||||||||| |||||||||||
Sbjct 2874 TTTCCCTGTACTTGAGTGCTTGAAAGGGATTTTGGATGTGGGACTTAGATGTTGTGAAGA 2933
Query 2664 ATCTCCGATGAACCGGTTGGCAACGAGTGAAGCAGCCAAGGAGTTAATCTCAATCAGAGA 2723
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2934 ATCTCCGCTGAACCGGTTGGCAACGAGTGAAGCAGCCAAGGAGTTAATCTCAATCAGAGA 2993
Query 2724 GAGGTTCTTTAAAACCCGAAGAACAGCTAGACGTTGA 2760
||| |||||||||||||| |||||||| |||||||||
Sbjct 2994 GAGATTCTTTAAAACCCGGAGAACAGCCAGACGTTGA 3030
Score = 1101 bits (596), Expect = 0.0
Identities = 1386/1754 (79%), Gaps = 107/1754 (6%)
Strand=Plus/Plus
Query 10 ATGAGGCTGTTTCTTTTACTTGCTTTCAATGCTCTCATGCTACTTGAAGCACATGGTTTT 69
||||| || ||||||||||||||||||||||||||||||| ||| |||||| ||||||||
Sbjct 1 ATGAGACTATTTCTTTTACTTGCTTTCAATGCTCTCATGCAACTCGAAGCATATGGTTTT 60
Query 70 ACCGATAAAACTGATACGCAAGCGTTGCTCGA-ATTCAAGTCTCAAGTTTCTGAA-GACA 127
|||||| ||| ||||| |||||||||| | || || ||||||||||||||||||| | ||
Sbjct 61 ACCGATGAAAGTGATAGGCAAGCGTTGTTGGAGAT-CAAGTCTCAAGTTTCTGAAAG-CA 118
Query 128 AAAGAGTTTTCTTATCCTCATGGAATCATTCATTCCCACTCTGCAGTTGGGAGGGGGTTA 187
|||| | | ||| ||| | |||||| | |||||||| |||||||| ||| || ||||||
Sbjct 119 AAAGGGATGCCTTGTCCGCGTGGAATAACTCATTCCCTCTCTGCAGCTGGAAGTGGGTTA 178
Query 188 AATGTGGCCGCAAACACAAGAGAGTTACTAGTTTGGACCTCCGAGGAATGCAATTAGGCG 247
|||||||||||||||||||||||||||| ||||||||||| ||||| |||| || || |
Sbjct 179 GATGTGGCCGCAAACACAAGAGAGTTACTCGTTTGGACCTCGGAGGATTGCAGTTGGGAG 238
Query 248 GAGTGATATCACCATCTATTGGTAATCTTTCATTCCTCATATATCTTGATCTCTCTAATA 307
||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||
Sbjct 239 GAGTGATATCACCATCTATTGGTAATCTTTCGTTTCTCATATATCTTGACCTCTCTAATA 298
Query 308 ACTCTTTTGGTGGAACCATTCCTCAAGAGGTGGGAGACTTATTTAGACTTGAATACTTGT 367
||||||||||||||||||| ||||||||| ||||| |||| ||||||||| |||| |||
Sbjct 299 ACTCTTTTGGTGGAACCATCCCTCAAGAGATGGGAAACTTGTTTAGACTTAAATATTTGG 358
Query 368 ATATGGGCATTAATTATCTGGGAGGAGGGATTCCAACTACTTTGTCTAACTGCTCTAGAT 427
| ||||| |||||||||||| ||||| ||||||| | | |||||| |||||||||||||
Sbjct 359 CTGTGGGCTTTAATTATCTGGAAGGAGAGATTCCAGCCAGTTTGTCCAACTGCTCTAGAT 418
Query 428 TGTTGGACCTTGATTTATTTTCAAATCC-TCTTGGACGA-GGTGTTCCTTCAGAACTAGG 485
||||| ||||||||||||||||||| | ||||||| || ||||||||||||||||||||
Sbjct 419 TGTTGTACCTTGATTTATTTTCAAA-CAATCTTGGA-GACGGTGTTCCTTCAGAACTAGG 476
Query 486 GTCATTGGCGAAC-CTAGTT-AGTTTAAATTTTCGTG-AGAATAACCTACAAGGGAA-GC 541
||||||| ||| || || | | || || || || | || |||| ||| |||| |
Sbjct 477 GTCATTGA-GAAAGCTTCTTTA-TCTATATCTTGGTCTA-AACGACCT-CAAAGGAAAG- 531
Query 542 TTCCT-GCATCTCTAGGAAACTTGACATCACTCATACGAGCT-AGCTTTGGAGGA-AA-C 597
|||| | || | || |||||||||| || || ||| | ||| | ||| ||| | || |
Sbjct 532 TTCCCCGTATTTATACGAAACTTGACGTCTCTAATA-GTGCTCAACTTGGGAT-ATAATC 589
Query 598 AATATGGAAGGAGAAATTCCAGATGATGTAGCTAGGCTGAGTCAAATGATGAT-TCTTGA 656
| | ||||||||||||||||||||||| |||||| ||||||||||||| || | |||| |
Sbjct 590 A-TCTGGAAGGAGAAATTCCAGATGATATAGCTATGCTGAGTCAAATGGTG-TCTCTT-A 646
Query 657 -ATTATCTTTTAACCAA-TTCTCAGGCGTTTTTCCTCCCGCAATCTACAA-TATGTCCTC 713
|||| | | ||| || ||||| |||||||||||||| || ||||||| | |||||||
Sbjct 647 CATTAACAATGAAC-AACTTCTCTGGCGTTTTTCCTCCTGCTTTCTACAACT-TGTCCTC 704
Query 714 ACTTGAAAATTTATATATGGCTT--TCAATCATTTCTCGGGTCGTCTT-A-GACCTGGTT 769
|||||| |||||||| | ||| | ||| |||||||||| ||| | | |||| ||
Sbjct 705 ACTTGAGAATTTATACCTC-CTTGGT-AATGGTTTCTCGGGTAA-CTTGAAG-CCTGATT 760
Query 770 TTGGTATTCTGCTACCAAATC-TTCAAGAGTTAAATATGGGAGGGAATTTTT-TCACCGG 827
|||||| |||||||||||| | |||| |||||| | || | |||| |||| | || ||
Sbjct 761 TTGGTAATCTGCTACCAAA-CATTCATGAGTTATCTTTGC-ATGGAAATTTTCTAACAGG 818
Query 828 TTCCATTCCAACAACACTTTCCAATATCTCGACTCTTCAAAAAGTG-GGACT-GAATGAC 885
|||| |||||||||||| ||||||| || ||||| ||| || ||| | | | |
Sbjct 819 AGCCATCCCAACAACACTTGCCAATATTTCAACTCTGGAAAT-GTTTGGAATTGG-TAAA 876
Query 886 AACAATCTGACAGGAAGTAT-TC-CT-A-CTTTCGAAAAAGTACCA-AATTTGCAATGGT 940
|||| ||||||||||||| || | | |||| ||||| || | |||||||| |
Sbjct 877 AACAGGATGACAGGAAGTATCTCTCCCAACTTTGGAAAAC-TAG-AGAATTTGCATTACC 934
Query 941 TACTTCTA-CGTAGA-AATTCGTTGGGAAGTTACTCTTTTGGAGATCTTG-ACTTCATCA 997
|| || | || | ||||| |||||||||||||||||||||||||||| | ||| | |
Sbjct 935 TAGAACTTGC-TA-ACAATTCTTTGGGAAGTTACTCTTTTGGAGATCTTGCATTTCTTGA 992
Query 998 -GCTCTTTAACTAACTGCACCCAACTAG-A-GAAATTAGGGCT-TG-GTGGGAATAGGCT 1052
||| || | |||| ||| |||| | | | | ||| || || || ||||||||
Sbjct 993 TGCT-TTGA-CTAATTGCTCCCATTT-GCATGGG-TTAT--CTGTGAGTTACAATAGGCT 1046
Query 1053 TGGGGGTGACTTT-CCTATTTCCATTACCAATCTGTCCGCGGAACTCACCGATTT-ACTC 1110
|||||||| |||| |||| |||||| |||| ||||| |||||||||||| ||| | |
Sbjct 1047 TGGGGGTG-CTTTGCCTACATCCATTGTCAATATGTCCACGGAACTCACCGTTTTGAA-C 1104
Query 1111 CTTGAAT-ATAATCACATCTCTGGGAGAATTCCTCAGGATATTGGGAACCTCTTAGGCCT 1169
||| || | || | ||| | ||| || |||||||| |||||||| || ||| |||||||
Sbjct 1105 CTTAAAGGA-AACCTCATTTATGGAAGCATTCCTCATGATATTGGAAATCTCATAGGCCT 1163
Query 1170 CCAAACGCTTGGGTTGCGC-GAAAATATGTTATCTGGACCACTCCCAACCTCTCTTGGTA 1228
||| | ||| |||| || || ||| | ||| | ||||||||||||||||||||||| |
Sbjct 1164 ACAATCACTTTTGTTG-GCAGATAATCTATTAACAGGACCACTCCCAACCTCTCTTGGAA 1222
Query 1229 ATCTCTTT-GGACTTGGGGTTTTAGATCTCAGCT--CAAACAAATTGTCAGGAGTA-ATA 1284
|||| | | || || |||| ||| || | | | |||| | || || |||| | |||
Sbjct 1223 ATCT-TGTAGGGCTCGGGGAATTA-ATTTT-GTTTTCAAATAGGTTTTCTGGAG-AGATA 1278
Query 1285 CCATCTACTATAGGAAACCTCACTCGGTTACAAAAACTCCGTTTGTCCAACAACATTTTT 1344
|| ||| |||||| ||||| |||| |||| |||||| ||| |||||||| | ||||
Sbjct 1279 CCCTCTTTTATAGGCAACCTTACTCAGTTAGTAAAACTATATTTATCCAACAATAGTTTT 1338
Query 1345 GAAGGAACCATTCCTCCAAGTCTCAGTAACTGCAGTGA-ACTGCTAC-ATTTAGAGATTG 1402
||||||| | ||||||| ||||| || | || ||| | | |||| | | ||| ||||||
Sbjct 1339 GAAGGAATCGTTCCTCCGAGTCTTGGTGATTGTAGTCACA-TGCT-CGACTTACAGATTG 1396
Query 1403 GGTATAATAAGTTGAATGGGACTATACCTAAGGAAATTATGCAACTTTCACACC-TTCTT 1461
||||||||||||| |||||||||||||||||||| || |||||| | || ||| || ||
Sbjct 1397 GGTATAATAAGTTAAATGGGACTATACCTAAGGAGATCATGCAAATCCCA-ACCCTTGTT 1455
Query 1462 -ACCCTCAGCATGCCAAG-TAATTCTATCAGTGGCACTCTTCCAAACGATGTTGGACGAC 1519
||| ||| |||| || ||||||| | |||||| |||| ||||||||| ||||| ||
Sbjct 1456 CACC-TCAACATGG-AATCTAATTCTTTGAGTGGCTCTCTACCAAACGATATTGGAAGAT 1513
Query 1520 TACAGAATCTCGTTCTA-CTATCTG-TATCGGA-TAATAAATTATCAGGGGAGCTCTCAC 1576
|||| ||||| ||| | |||| | | | ||| |||||| |||||||| | ||| |||
Sbjct 1514 TACAAAATCTTGTTG-AGCTAT-TACT-TGGGAATAATAACTTATCAGGACATCTCCCAC 1570
Query 1577 AGACTTTGGGAAACTGTCTTTCGATGGAAGAAATATATCTGCAAGGGAATTC-TTTTGAT 1635
| ||||||||||| |||||||||||||||| || ||||| |||| || | |||||||
Sbjct 1571 AAACTTTGGGAAAATGTCTTTCGATGGAAGTTATTTATCTACAAGAAAAC-CATTTTGAT 1629
Query 1636 GGAATCATTCCAAATATAAAAGGGTTGGTGGGTGTTAAAAGA-GATGATATGTCTAACAA 1694
|||| ||||||| |||||||||||||| |||||||||||| | | |||| |||| |||||
Sbjct 1630 GGAACCATTCCAGATATAAAAGGGTTGATGGGTGTTAAAA-ACGTTGATTTGTCAAACAA 1688
Query 1695 TAATCTCTCTGGAA 1708
||||||||||||||
Sbjct 1689 TAATCTCTCTGGAA 1702
> AT3G47570.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17527507-17530929 FORWARD LENGTH=3318
Length=3318
Score = 1221 bits (661), Expect = 0.0
Identities = 927/1054 (88%), Gaps = 24/1054 (2%)
Strand=Plus/Plus
Query 1719 TTGGCTCAGAAAAAGAAAGAAGAAC-CAGAAGACCAATAATTCAGCTGCTTCTACATTGG 1777
|||| | ||||| |||||||||||| |||| ||||||||| || || ||||||| ||||
Sbjct 2096 TTGGTTGAGAAAGAGAAAGAAGAACAAAGAA-ACCAATAATCCAACTCCTTCTACTTTGG 2154
Query 1778 -AGATATTCCATGAGAAGATAAGTTATGGAGATCTACGAAATGCGACAG-ATGGCTTCTC 1835
|| | || |||||||||||||||||||||||||| || |||||||| | ||||||||||
Sbjct 2155 AAG-TCTTGCATGAGAAGATAAGTTATGGAGATCTTCGTAATGCGAC-GAATGGCTTCTC 2212
Query 1836 TGCGAGCAACATGGTTGGGTCAGGCAGTTTTGGTACTGTGTTTAAGGCATTACTCCCGGA 1895
| ||||||| ||||| ||||| |||||||||||||| || | ||||||||| || || ||
Sbjct 2213 TTCGAGCAATATGGTCGGGTCTGGCAGTTTTGGTACCGTATATAAGGCATTGCT-CCTGA 2271
Query 1896 -GGAGAACAAGATTGTTGCAGTGAAAGTTCTAAACATGGAGAGACGTGGAGCGATGAAGA 1954
|||||| ||| ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 2272 CGGAGAAAAAGGTTGTTGCAGTGAAAGTTTTAAACATGCAGAGACGTGGAGCGATGAAGA 2331
Query 1955 GCTTTATGGCAGAATGTGAATCCTTGAAGGATATAAGGCATCGTAATCTTGTGAAACTAT 2014
||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 2332 GCTTTATGGCAGAATGTGAATCCTTGAAGGACATAAGACATCGTAATCTTGTGAAACTAT 2391
Query 2015 TGACAGCTTGTGCTAGTATTGATTTCCAAGGAAATGAATTCAGAGCTCTCATATACGAGT 2074
||||||||||| | ||||||||||| |||||||||||||| ||||||||||| || ||||
Sbjct 2392 TGACAGCTTGTTCGAGTATTGATTTTCAAGGAAATGAATTTAGAGCTCTCATCTATGAGT 2451
Query 2075 TCATGCCGAATGGAAGCTTGGATATGTGGCTGCACCCAGAGGAAATCGAAGAGATTCGCA 2134
||||||| |||||||| || |||||||||||||||||||||||| | |||||||||| |
Sbjct 2452 TCATGCCTAATGGAAGTTTAGATATGTGGCTGCACCCAGAGGAAGTGGAAGAGATTCATA 2511
Query 2135 GGCCCTCAAGAACCTTGACACTTCGTGAAAGGCTCAACATTGCCGTAGACGTGGCTTCTG 2194
||||||||||||| ||||| |||| ||||||||| ||||||||| |||||||||||||||
Sbjct 2512 GGCCCTCAAGAACTTTGACCCTTCTTGAAAGGCTTAACATTGCCATAGACGTGGCTTCTG 2571
Query 2195 TTTTGGACTATCTTCATGTTCATTGCCATGATCCTATAGCTCATTGTGATCTTAAGCCAA 2254
||||||| ||||| ||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 2572 TTTTGGATTATCTCCATGTTCATTGTCATGAACCTATAGCTCATTGCGATCTTAAGCCAA 2631
Query 2255 GCAACGTACTTCTCGACGATGATCTAACTGCCCATGTTAGCGACTTTGGTCTGGCTCGTC 2314
||||||| ||||| |||||||||||||| ||||||||||| ||||||||||| |||||||
Sbjct 2632 GCAACGTCCTTCTAGACGATGATCTAACCGCCCATGTTAGTGACTTTGGTCTAGCTCGTC 2691
Query 2315 TTCTCCTCAAATTTGATC-AGGAGTCCTTTTTCAACCAACTAAGCTCAACTGGTGTTAGA 2373
||||||||||||| || | |||||||||| |||||||||||||||||| | |||||||||
Sbjct 2692 TTCTCCTCAAATTCGA-CGAGGAGTCCTTCTTCAACCAACTAAGCTCAGCCGGTGTTAGA 2750
Query 2374 GGAACCATTGGGTATGCCGCACCAGAATATGGAATGGGAGGACAACCATCAATACACGGT 2433
|||||||| || |||||||||||||| |||||| |||||||||| ||||| ||| | |||
Sbjct 2751 GGAACCATCGGCTATGCCGCACCAGAGTATGGAGTGGGAGGACAGCCATCTATAAATGGT 2810
Query 2434 GATGTATACAGCTTTGGGGTACTCGTTTTGGAAATGTTCACAGGAAAACGACCAACCAAT 2493
|||||||| || |||||| | ||| |||| ||||||||||| |||||| |||||||||||
Sbjct 2811 GATGTATATAGTTTTGGGATTCTCCTTTTAGAAATGTTCACTGGAAAAAGACCAACCAAT 2870
Query 2494 GAGCTATTTG-AGGGGAGCTTTACCCT-ACACAGCTACACCA-GATCAGCCTTGCCAGAA 2550
|||||||||| ||| | ||||||||| | |||||||||| | | || || ||||| |||
Sbjct 2871 GAGCTATTTGGAGGAAA-CTTTACCCTGA-ACAGCTACACTAAG-TCGGCATTGCCGGAA 2927
Query 2551 AGAGTTTTGGACATTGCAGACAAATCGATTCTTCATAGTGGTCTCAGAGTTGGTTTCCCT 2610
||| | |||||||||| |||| |||| |||||||| | |||||||||||| |||||||||
Sbjct 2928 AGAATATTGGACATTGTAGACGAATCAATTCTTCACATTGGTCTCAGAGTCGGTTTCCCT 2987
Query 2611 GTAGTGGAGTGTTTGA-AAGTGATTTTGGATGTGGGACTTAGGTGTTGTGAAGAATCTCC 2669
|| || ||||| |||| || || |||| || ||||| |||||||||||||||||||||||
Sbjct 2988 GTTGTTGAGTGCTTGACAA-TGGTTTTTGAGGTGGGCCTTAGGTGTTGTGAAGAATCTCC 3046
Query 2670 GATGAACCGGTTGGCAACGAGTGA-AG-CAGCCAAGGAGTTAATCTCAATCAGAGAGAGG 2727
|||||||||||||||||||||| | || | | ||||||||| ||||||||||||||||||
Sbjct 3047 GATGAACCGGTTGGCAACGAGT-ATAGTC-GTCAAGGAGTTGATCTCAATCAGAGAGAGG 3104
Query 2728 TTCTTTAAAACCCGAAGAAC-AGCTAGACGTTGA 2760
||||||||| || | ||||| | || | ||||||
Sbjct 3105 TTCTTTAAAGCCAGTAGAACGA-CTTGGCGTTGA 3137
Score = 1181 bits (639), Expect = 0.0
Identities = 1399/1755 (80%), Gaps = 96/1755 (5%)
Strand=Plus/Plus
Query 2 TGGGAAGCATGAGGCTGTTTCTTTTACTTGCTTTCAATGCTCTCATGCTACTTGAAGCAC 61
||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 97 TGGAAAGCATGAGACTGTTTCTTTTACTTGCTTTCAATGCTCTCATGCTACTTGAAACAC 156
Query 62 ATGGTTTTACCGATAAAACTGATACGCAAGCGTTGCT-CGAATTCAAGTCTCAAGTTTCT 120
|||||||||||||| ||||||||| |||||| ||||| | | ||||||||||||||||||
Sbjct 157 ATGGTTTTACCGATGAAACTGATAGGCAAGCTTTGCTTC-AGTTCAAGTCTCAAGTTTCT 215
Query 121 GAAGACAAAAGAGTTTTCTTATCCTCATGGAATCATTCATTCCCACTCTGCAGTTGGGAG 180
||||||||||||||| |||| ||||||||||| || |||||||||||||||| |||| ||
Sbjct 216 GAAGACAAAAGAGTTGTCTTGTCCTCATGGAACCACTCATTCCCACTCTGCAATTGGAAG 275
Query 181 GGGGTTAAATGTGGCCGCAAACACAAGAGAGTTACT-AGTTTGGACCTCCGAGGAATGCA 239
|| |||| ||||||||| ||| |||| ||||||||| | | |||| ||| || || ||||
Sbjct 276 GGCGTTACATGTGGCCGTAAAAACAAAAGAGTTACTCA-TCTGGAACTCGGAAGATTGCA 334
Query 240 ATTAGGCGGAGTGATATCACCATCTATTGGTAATCTTTCATTCCTCATAT-ATCTTGATC 298
| |||||||||||||||||||||| ||||||||||| || || || ||| | |||||||
Sbjct 335 ACTAGGCGGAGTGATATCACCATCCATTGGTAATCTATCGTTTCTTGTATCA-CTTGATC 393
Query 299 TCTCT-AATAACTCTTTTGGTGGAACCATTCCTCAAGAGGTGGGAGACTTATTTAGACTT 357
||| | || |||| ||||||||| || |||||||||||||||||| | || | ||||||
Sbjct 394 TCTATGAA-AACTTTTTTGGTGGTACTATTCCTCAAGAGGTGGGACAGTTGTCTAGACTC 452
Query 358 GAATACTTGTATATGGGCATTAATTATCTG-GGAGGAGGGATTCCAACTACTT-TGT-CT 414
||||||||| |||||||||| |||||||| || ||| ||||||| || | | | |
Sbjct 453 GAATACTTGGATATGGGCATAAATTATCTTAGG-GGACCGATTCCAT-TAGGTCTATAC- 509
Query 415 AACTGCTCTAGATTGTTGGACCTT-GATTTATTTTCAAATCCTCTTGGACGAGGTGTTCC 473
|| ||||||||||||||| ||||| | |||| |||||||| |||||| || |||||||
Sbjct 510 AATTGCTCTAGATTGTTGAACCTTCG-TTTAGATTCAAATCGTCTTGGGGGAAGTGTTCC 568
Query 474 TTCAGAACTAGGGTCATTGGCGAACCTAGTT-AGTTTAAAT-TTTCGTGAGAAT-AACCT 530
|||||| ||||| |||||| ||||||| ||| |||| |||| ||| || ||| || |
Sbjct 569 TTCAGAGCTAGGATCATTGACGAACCTTGTTCAGTT-AAATCTTTA-TG-GAAACAA--T 623
Query 531 ACAAG-GGAA-GCTTCCTGCATCTCTAGGAAACTTGACATCACTCATA-CGAGCTAGCTT 587
| || |||| ||| ||| |||| |||||||||||||| | ||| | | | | || || |
Sbjct 624 ATGAGAGGAAAGCTCCCTACATCACTAGGAAACTTGACGTTACT-AGAACAA-CTTGCAT 681
Query 588 TGGAGGA-AACAATATGGAAGGAGAAATTCC-AGATGATGTAGCT-AGGCTGAGTCAAAT 644
|| | | |||||| |||||||||||||||| || |||||||||| | |||| ||||||
Sbjct 682 TGTCGCATAACAATCTGGAAGGAGAAATTCCGAG-TGATGTAGCTCAA-CTGACTCAAAT 739
Query 645 GATG-ATTCTTGAATTA-TCTTTTAACCAATT-CTCAGGCGTTTTTCCTCCCGCAATCTA 701
||| | |||| ||||| | ||| |||| ||| || |||||||||||||| ||||
Sbjct 740 -ATGGAGTCTTCAATTAGTAGCC-AAC-AATTTCTCCGGTGTTTTTCCTCCCGCTCTCTA 796
Query 702 CAA-TATGTCCTCACTTGAAAATT-TATATAT-GGCTT-TCAATCATTTCTCGGGTCGTC 757
||| | ||||||||||| || || || ||| || || | ||||||||||||||||| |
Sbjct 797 CAACT-TGTCCTCACTT-AAGCTTCTAGGTATCGG-TTAT-AATCATTTCTCGGGTCGCC 852
Query 758 TTAGACCTGGTTTTGGTATTCTGCTACCAAATCTTCAAGAGTTAAATATGGGAGGGAATT 817
||||||||| || |||||||| ||||||||||||| | ||| ||||||||||||||||
Sbjct 853 TTAGACCTGACTTAGGTATTCTACTACCAAATCTTCTATCGTTTAATATGGGAGGGAATT 912
Query 818 TTTTCACCGGTTCCATTCCAACAACACTTTCCAATATCTCGACTCTTCAAAAAGTGGG-A 876
|||||| || |||||||||||||| |||||||||||||| |||||| ||| | |||| |
Sbjct 913 ATTTCACAGGGTCCATTCCAACAACTCTTTCCAATATCTCTACTCTTGAAAGATTGGGTA 972
Query 877 CTGAATGACAACAATCTGACAGGAAGTATTCCTACTTTCGAAAAAGTACCAAATTTGCAA 936
||||||| |||||||||||||||||||||||||| |||| ||| || |||||||| ||
Sbjct 973 -TGAATGAGAACAATCTGACAGGAAGTATTCCTACATTCGGAAATGTTCCAAATTTAAAA 1031
Query 937 TGGTTACTTCTACGTAGAAATTCGTTGGGAAGTTACTCTTTTGGAGATCTTGACTTCATC 996
| |||| |||| | || ||||| || |||||| | |||| | |||||||||| ||| ||
Sbjct 1032 TTGTTATTTCTTCATACCAATTCTTTAGGAAGTGATTCTTCTAGAGATCTTGAATTCCTC 1091
Query 997 AGCT-CTTTAACTAACTGCACCCAACTAGAGAAATTAGGGCTTGGTGGGAATAGGCTTGG 1055
| || |||| || ||||||||||||||||||| |||||| |||| | |||||||||||
Sbjct 1092 A-CTTCTTTGACAAACTGCACCCAACTAGAGACCTTAGGGATTGGCAGAAATAGGCTTGG 1150
Query 1056 GGGTGACTTTCCTATTTCCATTACCAATCTGTCCGCGGAACTCACCGATT-TACTCCTTG 1114
||||||||| ||||| || ||| | || || ||||| ||||| | | || |||||
Sbjct 1151 GGGTGACTTGCCTATATCTATTGCGAACCTATCCGCAAAACTCGTA-ACTCTAGACCTTG 1209
Query 1115 AATATAATCA-CATCTCTGGGAGAATTCCTCAGGATATTGGGAACCTCTTAGGCCTCCAA 1173
| || | ||| || || || |||||| | || ||||| || ||| || ||| |||
Sbjct 1210 GAGG-AACCCTCATTTCCGGAAGCATTCCTTATGACATTGGAAATCTCATAAACCTACAA 1268
Query 1174 ACGCTTGGGTT-GCGCGAAAATATGTT-ATCTGGACCACTCCCAACCTCTCTTGGTAATC 1231
| |||| || | | |||||||||| | |||||||||||||||||||||||| || |
Sbjct 1269 AAGCTTATTTTAGATC-AAAATATGTTGAG-TGGACCACTCCCAACCTCTCTTGGAAAGC 1326
Query 1232 TCTTTGGACTTGGGGT-TTTA-GATCTCAGCT-CAAACAAATTGTCAGGAG-TAATACCA 1287
| |||| | ||| ||| |||| | ||| | | |||| | ||| ||||||| || |||||
Sbjct 1327 T-TTTGAATTTGAGGTATTTAAG-TCT-ATTTTCAAATAGATTATCAGGAGGTA-TACCA 1382
Query 1288 TCTACTATAGGAAACCTCACTCGGTTACAAAAACTCCG-TTTGTCCAACAACATTTTTGA 1346
|| |||||| ||| | ||| |||| ||| ||| | |||||||||||| ||||||
Sbjct 1383 GCTTTTATAGGCAACATGACTATGTTAGAAACACTT-GATTTGTCCAACAATGGTTTTGA 1441
Query 1347 AGGAACCATTCCTCCAAGTCTCAGTAACTGCAGTGAACTGCTACATTTAGAG-ATTGGGT 1405
||| | ||||| ||||||| | ||||| ||| | || ||| | || | | ||||||
Sbjct 1442 AGGTATTGTTCCTACAAGTCTTGGCAACTGTAGTCACCTACTAGAATT-GTGGATTGGGG 1500
Query 1406 ATAATAAGTTGAATGGGACTATACCTAAGGAAATTATGCAACTTTCA-CACCTTCTTAC- 1463
|||||||||||||||||||||||||| |||||||||| || || || || |||||| |
Sbjct 1501 ATAATAAGTTGAATGGGACTATACCTCTGGAAATTATGAAAATT-CAGCAGCTTCTT-CG 1558
Query 1464 CCTCAG-CATGCCAAGTAATTCTATCAGT-GGCACTCTTCCAAACGATGTTGGA-CGACT 1520
||| || |||| || | |||||| | | | ||| |||| || | ||| | ||| || ||
Sbjct 1559 CCT-AGACATGTCAGGAAATTCTTTGA-TCGGCTCTCTCCCGCAGGATATCGGAGCG-CT 1615
Query 1521 ACAGAATCTCGTT-CTACTATCTGTATCGG-ATAATAAATTATCAGGGGAGCTCTC-ACA 1577
||| ||||| | | | |||||| | | || ||||||||||||||||| | || || |||
Sbjct 1616 ACAAAATCTTGGTAC-ACTATCACT-TGGGGATAATAAATTATCAGGGAAACT-TCCACA 1672
Query 1578 GACTTTGGGAAACTGTCTTTCGATGGAA-GAAATATATCTGCAAGGGAATTC-TTTTGAT 1635
|||||||||||||||||| | |||||| | | | | || |||| |||| |||| ||
Sbjct 1673 AACTTTGGGAAACTGTCTTACAATGGAAAGTCTTTTTT-TGGAAGGAAATTTGTTTT-AT 1730
Query 1636 GGA-ATCATTCCAAATATAAAAGGGTTGGTGGGTGTTAAAAGA-GATGATATGTCTAACA 1693
||| || |||||| || ||||||||||||||||||||||| || | |||| |||||||||
Sbjct 1731 GGAGAT-ATTCCAGATTTAAAAGGGTTGGTGGGTGTTAAA-GAAGTTGATTTGTCTAACA 1788
Query 1694 ATAATCTCTCTGGAA 1708
|| ||||||||||||
Sbjct 1789 ATGATCTCTCTGGAA 1803
> AT3G47580.1 | Symbols: | Leucine-rich repeat protein kinase
family protein | chr3:17532648-17536059 FORWARD LENGTH=3324
Length=3324
Score = 1212 bits (656), Expect = 0.0
Identities = 924/1053 (88%), Gaps = 20/1053 (2%)
Strand=Plus/Plus
Query 1718 GTTGGCTCAGAAAAAGAAAGAAGAACCAGAAGACCAATAATTC-AGCTGCTTCTACA-TT 1775
||||| |||||||||||| |||||||||| |||| ||||| | | | |||||| | ||
Sbjct 2033 GTTGGTTCAGAAAAAGAAGGAAGAACCAGCAGACAAATAA-CCTGGTTCCTTCTA-AGTT 2090
Query 1776 GGAGATATTCCATGAGAAGATAAGTTATGGAGATCTACGAAATGCGACAGATGGCTTCTC 1835
|||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 2091 GGAGATTTTCCATGAGAAGATAAGCTATGGAGATCTACGAAATGCGACAAATGGCTTCTC 2150
Query 1836 TGCGAGCAACATGGTTGGGTCAGGCAGTTTTGGTACTGTGTTTAAGGCATTACTCCCGGA 1895
| | ||||| |||||||||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct 2151 TTCAAGCAATATGGTTGGGTCAGGTAGTTTTGGTACTGTGTTCAAGGCATTGCTCCC-GA 2209
Query 1896 -GGAGAACAAGATTGTTGCAGTGAAAGTTCTAAACATGGAGAGACGTGGAGCGATGAAGA 1954
||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 2210 CGGAGAGCAAGATTGTTGCAGTGAAAGTTCTAAACATGCAGAGACGTGGAGCTATGAAGA 2269
Query 1955 GCTTTATGGCAGAATGTGAATCCTTGAAGGATATAAGGCATCGTAATCTTGTGAAACTAT 2014
|||||||||||||||||||||||||||| || | |||||||||||||||||||||| ||
Sbjct 2270 GCTTTATGGCAGAATGTGAATCCTTGAAAGACACAAGGCATCGTAATCTTGTGAAATTAC 2329
Query 2015 TGACAGCTTGTGCTAGTATTGATTTCCAAGGAAATGAATTCAGAGCTCTCATATACGAGT 2074
|||||||||| ||||||| ||||||||||||||| ||||||||||| || || || ||||
Sbjct 2330 TGACAGCTTGCGCTAGTACTGATTTCCAAGGAAACGAATTCAGAGCGCTTATCTATGAGT 2389
Query 2075 TCATGCCGAATGGAAGCTTGGATATGTGGCTGCACCCAGAGGAAATCGAAGAGATTCGCA 2134
| |||||||||||||| |||||||||||||||||||||||||| |||||||||| || |
Sbjct 2390 ACTTGCCGAATGGAAGCGTGGATATGTGGCTGCACCCAGAGGAAGTCGAAGAGATACGTA 2449
Query 2135 GGCCCTCAAGAACCTTGACACTTCGTGAAAGGCTCAACATTGCCGTAGACGTGGCTTCTG 2194
||||| || ||||||||||||||| ||||||||| || |||| | |||||||||||||||
Sbjct 2450 GGCCCCCACGAACCTTGACACTTCTTGAAAGGCTTAATATTGTCATAGACGTGGCTTCTG 2509
Query 2195 TTTTGGACTATCTTCATGTTCATTGCCATGATCCTATAGCTCATTGTGATCTTAAGCCAA 2254
|||||||||||||||||||||| || ||||| |||||||||||||| ||||| |||||||
Sbjct 2510 TTTTGGACTATCTTCATGTTCACTGTCATGAGCCTATAGCTCATTGCGATCTCAAGCCAA 2569
Query 2255 GCAACGTACTTCTCGACGATGATCTAACTGCCCATGTTAGCGACTTTGGTCTGGCTCGTC 2314
||||||| ||||| || |||||| | || ||||||||||| || |||||||||||||| |
Sbjct 2570 GCAACGTCCTTCTAGAAGATGATTTGACCGCCCATGTTAGTGATTTTGGTCTGGCTCGGC 2629
Query 2315 TTCTCCTCAAATTTGATC-AGGAGTCCTT-TTTCAACCAACTAAGCTCAACTGGTGTTAG 2372
|||| |||||||| || | ||||||| || || ||||||||||||||| | || |||||
Sbjct 2630 TTCTACTCAAATTCGA-CAAGGAGTCATTCCTT-AACCAACTAAGCTCAGCCGGAGTTAG 2687
Query 2373 AGGAACCATTGGGTATGCCGCACCAGAATATGGAATGGGAGGACAACCATCAATACACGG 2432
||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2688 AGGAACCATCGGCTATGCCGCACCAGAATATGGAATGGGAGGACAACCATCAATACATGG 2747
Query 2433 TGATGTATACAGCTTTGGGGTACTCGTTTTGGAAATGTTCACAGGAAAACGACCAACCAA 2492
|||||| || ||||||||||| ||| |||| ||||||||||| || ||||||||||| |
Sbjct 2748 TGATGTGTATAGCTTTGGGGTTCTCCTTTTAGAAATGTTCACCGGGAAACGACCAACTGA 2807
Query 2493 TGAGCTATTTGAGGGGAGCTTTACC-CTACACAGCTACACCA-GATCAGCCTTGCCAGAA 2550
|||| |||||| ||||| |||| | ||||| |||||||||| | | ||| |||||||||
Sbjct 2808 TGAGTTATTTG-GGGGAAATTTAACACTACATAGCTACACCAAGTT-AGCGTTGCCAGAA 2865
Query 2551 AGAGTTTTGGACATTGCAGACAAATCGATTCTTCATAGTGGTCTCAGAGTTGGTTTCCCT 2610
| ||| || || |||||||||||| |||||||||| | |||||| |||||||||||||
Sbjct 2866 AAAGTATTCGAAATTGCAGACAAAGCGATTCTTCACATTGGTCTTAGAGTTGGTTTCC-- 2923
Query 2611 GTAGTG--GAGTGTTTGAAAGTGATTTTGGATGTGGGACTTAGGTGTTGTGAAGAATCTC 2668
||| || ||||| |||| | || ||||||| |||||||||||||| |||||||||| ||
Sbjct 2924 GTACTGCTGAGTGCTTGACACTGGTTTTGGAGGTGGGACTTAGGTGCTGTGAAGAATATC 2983
Query 2669 CGATGAACCGGTTGGCAACGAGTGAAG-CAGCCAAGGAGTTAATCTCAATCAGAGAGAGG 2727
| | ||||||||||||||||||||||| | || || ||||| |||||||||||||| |||
Sbjct 2984 CTACGAACCGGTTGGCAACGAGTGAAGTC-GCAAAAGAGTTGATCTCAATCAGAGAAAGG 3042
Query 2728 TTCTTTAAAACCCGAAGAACAGCTAGACGTTGA 2760
|||||||||||| |||||||| |||||||||||
Sbjct 3043 TTCTTTAAAACCAGAAGAACACCTAGACGTTGA 3075
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 137106255219
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5