BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg347836 Length=1608 Score E Sequences producing significant alignments: (Bits) Value AT3G55210.1 | Symbols: anac063, NAC063 | NAC domain containing ... 706 0.0 AT3G56560.1 | Symbols: anac065, NAC065 | NAC domain containing ... 281 1e-74 AT5G39540.1 | Symbols: | F-box associated ubiquitination effec... 204 3e-51 > AT3G55210.1 | Symbols: anac063, NAC063 | NAC domain containing protein 63 | chr3:20465215-20466240 FORWARD LENGTH=843 Length=843 Score = 706 bits (382), Expect = 0.0 Identities = 644/765 (84%), Gaps = 39/765 (5%) Strand=Plus/Plus Query 638 TGTCTCCTCCGTCGACGATACCGTACATATTACCGCCAAGTTATAAGTTTGTGCC-AGCT 696 |||||||||||||||||||| | ||| ||||||||||| ||| |||||||||||| | | Sbjct 2 TGTCTCCTCCGTCGACGATAGCTTACGTATTACCGCCAGGTTTTAAGTTTGTGCCAAAC- 60 Query 697 GATGAAGAAGTCATCTTTTGTTACTTGAAACCCTACTTGGACGACAACAAGAACGTATTG 756 ||||||||||||||| ||||||||||||||| |||| ||||| ||||| |||||||||| Sbjct 61 GATGAAGAAGTCATCCATTGTTACTTGAAACCTTACTCGGACGGCAACACGAACGTATTG 120 Query 757 CTCAATGTTCCTATTCATCTTGTCAACATTTACGAGTCGAATCCAC-AACTACTTTCAGT 815 ||| |||||||||||||||| ||||| || |||||||||||||||| ||| |||||||| Sbjct 121 CTCCATGTTCCTATTCATCTCGTCAATATCTACGAGTCGAATCCACAAAC-ACTTTCAGA 179 Query 816 GGAATTTGATAAGGGTAATGACAAAGAATGGTTCATTATAACGGAGAGGAAAAAAGTTGA 875 |||||| | |||||||| || ||||||||||| ||||||||||||||||| |||||||| Sbjct 180 GGAATTCCAGAAGGGTAACGATAAAGAATGGTTTATTATAACGGAGAGGAACAAAGTTGA 239 Query 876 TCAAGGTTTAAGCAAAACAAAGAGAGTTGGTAATGGTGGGACAACAAGGCAGAAACGTGG 935 ||||||||||||| ||||||||||||||||| |||||| | || |||||||||||||| Sbjct 240 TCAAGGTTTAAGCCAAACAAAGAGAGTTGGTTATGGTGCG--AA-AAGGCAGAAACGTGT 296 Query 936 CGACACTAAAGGAGGATATTGGCACGCAACAGTGGGTGCCCAGGAGATCATCGATGCTG- 994 ||||||||| ||||||||||||||||||||||||| |||||| |||||| || || | Sbjct 297 CGACACTAACGGAGGATATTGGCACGCAACAGTGGCTGCCCAAAAGATCAACGCTG--GA 354 Query 995 GA-GGTATCGTTGGCTACAAAACTG-CATTTGCATACTACGTTAGGG-AA-CAGTCAGCC 1050 || ||| ||||| || |||||| | || | |||||||||||| ||| || || |||| Sbjct 355 GATGGTGTCGTTCGCAACAAAA-GGCCACTGGCATACTACGTT-GGGAAACCA-TCAGAA 411 Query 1051 GACTTCAAAACTGATTGGTTAATGCTTGAATACTC-GTTGCATCACACTTGTCACAACAA 1109 | | ||||||||||||||||||||| |||||||| ||| ||||| ||| ||||||||| Sbjct 412 GGCGTCAAAACTGATTGGTTAATGCAAGAATACTCTCTTG-ATCACTCTTCTCACAACAA 470 Query 1110 CGACAAGGATTACACTTTGTGCAAGATCTATCCGACTCCACAAGCAACgaagaagaa-ag 1168 |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| | Sbjct 471 CGACAAGGATTACACTTTGTGCAAGATCTATCTTACTCCACAAGCAACAAAGATGAATAA 530 Query 1169 a-aa-tggaagc-gcagaataagaagcagaagaaaggagaagTCGCTATTTCAGTTGCAC 1225 | || ||| || | |||| |||||||||||||||||||||| || | |||||||||||| Sbjct 531 AGAAGTGGGAGAAG-AGAAGAAGAAGCAGAAGAAAGGAGAAGCCGTTGTTTCAGTTGCAC 589 Query 1226 ATGTGGAAGCATTGGAAGAGCATCAGCCTCGTAATGTCGAGTTTCCA-CAACCGCATCAA 1284 ||||||||||||||||||||| | |||| |||||||||||| || | ||||||| | | Sbjct 590 CTGTGGAAGCATTGGAAGAGCAGCTGCCTTGTAATGTCGAGTATC-ATCAACCGC-T-A- 645 Query 1285 TCGCAAGCCCTGCTGGATTCTTATCAACATCAGCCTCATGATTTTGCCTTTCAGCAACCG 1344 ||| || ||| ||||||| |||| |||||||||||||| || | ||| || | | Sbjct 646 --GCA--CC--GCTAGATTCTTGCCAACCGCAGCCTCATGATTTGGCGTATCAACAGCAG 699 Query 1345 CAATTTTCG-CAAGGCCCGA-TAGATTCTCAGCAACCGCTGCCTC 1387 || |||| | | |||||| | | |||||| | ||||||| ||||| Sbjct 700 CAGTTTT-GTCCAGGCCC-ACTGGATTCTTATCAACCGCAGCCTC 742 Score = 569 bits (308), Expect = 2e-161 Identities = 465/538 (86%), Gaps = 22/538 (4%) Strand=Plus/Plus Query 7 TACATATTACCGCAAGGTTTTAAGTTTATGCC-ATCTGATGAACAAGTTATCTTTTGTTA 65 ||| ||||||||| ||||||||||||| |||| | | |||||| |||| ||| |||||| Sbjct 25 TACGTATTACCGCCAGGTTTTAAGTTTGTGCCAAAC-GATGAAGAAGTCATCCATTGTTA 83 Query 66 CTTGAAATCC-TACTTGGACGGCTACAAGAACGTATTGCTTGATGTTCCTATTCATCTCG 124 ||||||| || |||| ||||||| ||| |||||||||||| |||||||||||||||||| Sbjct 84 CTTGAAA-CCTTACTCGGACGGCAACACGAACGTATTGCTCCATGTTCCTATTCATCTCG 142 Query 125 TCAATATTTATGAGTCGAATCCAC-GACTACTTTCAGTGGATTTCGATAAGGGTAACGAC 183 ||||||| || ||||||||||||| || |||||||| ||| ||| | ||||||||||| Sbjct 143 TCAATATCTACGAGTCGAATCCACAAAC-ACTTTCAGAGGAATTCCAGAAGGGTAACGAT 201 Query 184 AAAGAATGGTTTATTATAACGGAGAGaaaaaaaGTTGATCAAGGTTTAAGCAAAACAAAG 243 |||||||||||||||||||||||||| || ||||||||||||||||||||| |||||||| Sbjct 202 AAAGAATGGTTTATTATAACGGAGAGGAACAAAGTTGATCAAGGTTTAAGCCAAACAAAG 261 Query 244 AGAGTTGGTAATGGTGGGACAACAAGGCAGAAACGTGGCGACACTAAAGGAGGATATTGG 303 ||||||||| |||||| | || |||||||||||||| ||||||||| |||||||||||| Sbjct 262 AGAGTTGGTTATGGTGCG--AA-AAGGCAGAAACGTGTCGACACTAACGGAGGATATTGG 318 Query 304 CACGCAACAGTGGGTGCACATGAGATCAATGCTGGAGA---TATCGTTGGCTACAAAACG 360 ||||||||||||| ||| || ||||||| |||||||| | ||||| || |||||| | Sbjct 319 CACGCAACAGTGGCTGCCCAAAAGATCAACGCTGGAGATGGTGTCGTTCGCAACAAAA-G 377 Query 361 G-CATTTGCATACTACGTTAGGG-AA-CAGTCAGCCGACGTCAAAACTGATTGGTTAATG 417 | || | |||||||||||| ||| || || |||| | |||||||||||||||||||||| Sbjct 378 GCCACTGGCATACTACGTT-GGGAAACCA-TCAGAAGGCGTCAAAACTGATTGGTTAATG 435 Query 418 CTTGAATACTC-GTTGTATAACACTTTTCACAACAACGACAAGGATTACACTTTGTGCAA 476 | |||||||| ||| || || ||| ||||||||||||||||||||||||||||||||| Sbjct 436 CAAGAATACTCTCTTG-ATCACTCTTCTCACAACAACGACAAGGATTACACTTTGTGCAA 494 Query 477 GATCTATCTGACTCCACAAGCAACAaagaagaagaaagaagtggaaga-gcagaagaa 533 ||||||||| ||||||||||||||||||| ||| |||||||||| ||| | ||||||| Sbjct 495 GATCTATCTTACTCCACAAGCAACAAAGATGAATAAAGAAGTGGGAGAAG-AGAAGAA 551 > AT3G56560.1 | Symbols: anac065, NAC065 | NAC domain containing protein 65 | chr3:20955404-20956867 FORWARD LENGTH=687 Length=687 Score = 281 bits (152), Expect = 1e-74 Identities = 224/259 (86%), Gaps = 4/259 (2%) Strand=Plus/Plus Query 558 AGAAAGATCCACGCCAGAACCGCAAAAGCAACCACCGTCGGAGAATCATTCTTCTTCTTC 617 |||||||||| ||| |||||||||| |||||||| ||| |||| || ||||||||| || Sbjct 234 AGAAAGATCCTGGCCGGAACCGCAAACGCAACCACAGTCAGAGATTCCTTCTTCTTCGTC 293 Query 618 TTTTTTGTCAGCTGATAACTTGTCTCCTCCGTCGACGATACCGTACATATTACCGCCAAG 677 || |||| ||||||||||| |||||||||||||||||||| | ||| ||||||||||| | Sbjct 294 TTCTTTGGCAGCTGATAACATGTCTCCTCCGTCGACGATAGCTTACGTATTACCGCCAGG 353 Query 678 TTATAAGTTTGTGCC-AGCTGATGAAGAAGTCATCTTTTGTTACTTGAAACCCTACTTGG 736 || ||||||| |||| | | ||| ||||||||||| ||||||||||||||| |||| || Sbjct 354 TTTTAAGTTTATGCCAAAC-GATAAAGAAGTCATCAATTGTTACTTGAAACCTTACTCGG 412 Query 737 ACGACAACAAGAACGTATTGCTCAATGTTCCTATTCATCTTGTCAACATTTACGAGTCGA 796 ||| ||||| |||||||||||||||||||||||||||| ||||| || |||||||||| Sbjct 413 ACGGCAACACCAACGTATTGCTCAATGTTCCTATTCATCGCGTCAATATCTACGAGTCGA 472 Query 797 ATCCACA-ACTACTTTCAG 814 ||||||| || |||||||| Sbjct 473 ATCCACAGAC-ACTTTCAG 490 > AT5G39540.1 | Symbols: | F-box associated ubiquitination effector family protein | chr5:15833743-15834420 REVERSE LENGTH=591 Length=591 Score = 204 bits (110), Expect = 3e-51 Identities = 231/287 (80%), Gaps = 18/287 (6%) Strand=Plus/Plus Query 1101 TCACAACAACGACAAGGATTACACTTTGTGCAAGATCTATCCGACTCCACAAGC---AAC 1157 |||||||| | |||||||||||| ||| |||||||| |||| ||||||||||| || Sbjct 270 TCACAACAGCAACAAGGATTACAATTTTTGCAAGATATATCTTACTCCACAAGCAATAAA 329 Query 1158 gaagaagaaagaaatggaag-cgcagaataagaagcagaagaaaggagaagTCGCTATTT 1216 ||||||||||||| |||||| | |||| |||||||||||||||||||||| || | ||| Sbjct 330 GAAGAAGAAAGAAGTGGAAGAAG-AGAAGAAGAAGCAGAAGAAAGGAGAAGCCGTTGTTT 388 Query 1217 CAGTTGCACATGTGGAAGCATTGGAAGAGCATCAGCCTCGTAATGTCGAGTTTCCA-CAA 1275 ||||||||||||||||||||||||||||||| || ||| | |||||||||| || | ||| Sbjct 389 CAGTTGCACATGTGGAAGCATTGGAAGAGCAGCAACCTTGCAATGTCGAGTATC-ATCAA 447 Query 1276 CCGCATCAATCGCAAGCCCTGCTGGATTCTTATCAACATCAGCCTCATGATTTTGCCTTT 1335 |||| | | ||| || ||| ||||||| |||| |||| ||||||||| | | | Sbjct 448 CCGC-T-A---GCA--CC--GCTAGATTCTTGCCAACCGCAGCGTCATGATTTGGAATAT 498 Query 1336 CAGCAACCGCAATTTTCG-CAAGGCCCGATAGATTCTCAGCAACCGC 1381 || || | ||| |||| | | ||||||| | |||||| | ||||||| Sbjct 499 CAACAGCAGCAGTTTT-GTCCAGGCCCGCTGGATTCTTATCAACCGC 544 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 79417262190 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5