BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg347854
Length=933
Score E
Sequences producing significant alignments: (Bits) Value
AT3G47590.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1406 0.0
AT1G29840.1 | Symbols: | alpha/beta-Hydrolases superfamily pro... 1018 0.0
AT3G47560.2 | Symbols: | alpha/beta-Hydrolases superfamily pro... 379 2e-104
> AT3G47590.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:17535759-17537530 REVERSE LENGTH=1319
Length=1319
Score = 1406 bits (761), Expect = 0.0
Identities = 876/932 (94%), Gaps = 5/932 (1%)
Strand=Plus/Plus
Query 1 ATGAGAACTCTTTTGCAAAAATTCAGTTTTGCCCCTCAAGATTCTCTTTATTACAAAACT 60
||||||||||||||||| || |||| ||||| |||||||||||||| ||||||||||||
Sbjct 16 ATGAGAACTCTTTTGCACAACTTCAATTTTGTCCCTCAAGATTCTCCTTATTACAAAACG 75
Query 61 TCCCCTTTTCCCAAATCATCCTTCTTCAACGTTCGCCTTCCCATCAAGAACAATCAACAA 120
||||||||||||| |||||||||||||||||||||| |||||||||||||||| | |||
Sbjct 76 TCCCCTTTTCCCACATCATCCTTCTTCAACGTTCGCTTTCCCATCAAGAACAA-C--CAA 132
Query 121 ATCTCTTGCAACAAAGCAAACAATTTGAGAATGGATTCGTCTAAGGGAATTCAAGAACAG 180
|||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||||||||
Sbjct 133 ATCTCTTGTAACAAAGCAAAGAATTTGAGAATGGATCCGTCTAAGGGAATCCAAGAACAG 192
Query 181 AGGATTGTGATTCCGAACGGACACAACCAGAAGCTGGTTGGTCTACTTCATGAAACTGGT 240
|||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||||||
Sbjct 193 AGGATTGTGATTCCAAACAGACACAACGAGAAGCTGGTTGGTCTGCTTCATGAAACTGGT 252
Query 241 TCAACAGA-AGTTGTAGTCTTGTGCCATGGATTTCGATCTAACAAGAATAACCAAATTAT 299
|| ||||| | | ||||||||||||||||| |||||||| ||||||| ||||||||| ||
Sbjct 253 TCTACAGACA-TCGTAGTCTTGTGCCATGGCTTTCGATCAAACAAGAGTAACCAAATAAT 311
Query 300 GAATAATGTGGCTGCTGCTATAGAGAAAGAAGGAATCAGCGCTTTTCGTTTTGATTTCTC 359
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 312 GAATAATGTGGCTGCTGCTATACAGAAAGAAGGGATCAGCGCTTTTCGTTTTGATTTCTC 371
Query 360 TGGGAATGGAGAGAGTGAAGGCAGTTTCTATTATGGTAACTATAACCATGAAGCTGATGA 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 372 CGGGAATGGAGAGAGTGAAGGCAGTTTCTATTATGGTAACTATAACCATGAAGCTGATGA 431
Query 420 TCTACATTCTGTTATCCAATACTTCACTAACAAGAACCGTGTGGTTCCTATCATTCTCGG 479
| ||||||||||| ||||||||||| ||||||||||||||||||||||||| || |||||
Sbjct 432 TTTACATTCTGTTGTCCAATACTTCTCTAACAAGAACCGTGTGGTTCCTATAATCCTCGG 491
Query 480 GCATAGTAAGGGAGGTGATGTTGTTCTCCTCTATGCCTCCAAGTATCACGATGTCCGCAA 539
|| |||||||||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct 492 TCACAGTAAGGGAGGTGATGTTGTCCTCCTCTACGCCTCCAAGTATCATGATGTCCGCAA 551
Query 540 TGTAATCAATCTCTCGGGACGTTATGATCTTAAAAAAGGCATAAGAGAGCGTCTTGGTGA 599
|||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 552 TGTAATCAATCTCTCGGGACGTTATGATCTTAAAAAGGGTATAAGAGAGCGTCTTGGAGA 611
Query 600 AGATTTTTTGGAAAGAATTAAGCAACAAGGATTCATTGATGTTGGAGATGGAAAATCGGG 659
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 612 AGATTTTTTGGAAAGAATTAAGCAACAAGGATTCATCGATGTTGGAGATGGAAAATCGGG 671
Query 660 GTATCGTGTTACTGAGAAGAGTTTAATGGACAGGTTAAGCACTGATATGCATGAAGCTTG 719
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 672 GTATCGTGTTACTGAGAAGAGCTTAATGGACAGGTTAAGCACTGATATTCATGAAGCTTG 731
Query 720 CCTCAAGATTGACAAAGAATGCAGGGTCTTGACGGTTCATGGATCGGCTGACGAGGTAAT 779
|||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 732 CCTCAAGATTGACAAAGAGTGCAGGGTCTTGACGGTTCATGGATCGGAGGACGAGGTAAT 791
Query 780 ACGTGTGGAAGATGCGAAGGAGTTTGCGAAGATCATACCGAACCACAAGCTGGAGATTGT 839
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 792 ACCTGTGGAAGATGCGAAGGAGTTTGCGAAGATCATACCAAACCACAAGCTGGAGATTGT 851
Query 840 GGAAGGAGCTGATCATTGTTATACCGAGCACCAAAGTCAATTAGTTTCAACAGTTATGGA 899
|||||||||| ||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 852 GGAAGGAGCTAATCATGGTTATACTGAGCACCAAAGTCAATTAGTTTCAACAGTTATGGA 911
Query 900 GTTCATAAAGACAGTCATTATGATGAACAACT 931
||||||||||||||||||| ||| ||||||||
Sbjct 912 GTTCATAAAGACAGTCATTGTGAAGAACAACT 943
> AT1G29840.1 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr1:10445625-10447553 REVERSE LENGTH=1033
Length=1033
Score = 1018 bits (551), Expect = 0.0
Identities = 789/903 (87%), Gaps = 20/903 (2%)
Strand=Plus/Plus
Query 42 TTCTCTTTATTACAAAACTTCCCCTTTTCCCA-AATCATCCTTCTTCAACGTTCGCCTTC 100
|||||| ||||||||| |||||||| || | | || || |||||||||||| || |||
Sbjct 26 TTCTCTAGATTACAAAATTTCCCCTTCACCTACATTC-TCGTTCTTCAACGTTAGCTTTC 84
Query 101 CCATCAAGAACAATCAACAAATCTCTTGCAACAAAGCAAACAATTTGAGAATGGATTCGT 160
|||| ||||| || | |||||| ||||||||| ||||||| |||||||||||||||
Sbjct 85 CCATTAAGAAGAA--GA-GAATCTCCTGCAACAAATCAAACAAGCTGAGAATGGATTCGT 141
Query 161 CTAAGGGAA--T----T-C-A-AGAACAGAGGATTGTGATTCCGAA-CGGACACAACCAG 210
|| |||||| | | | | | |||||| ||| ||||||| ||| | | ||||| ||
Sbjct 142 CTCAGGGAATTTCAGCTACTACACAACAGAAGATAGTGATTCTGAATAGCA-ACAACGAG 200
Query 211 AAGCTGGTTGGTCTACTTCATGAAACTGGTTCAACAGAAGTTGTAGTCTTGTGCCATGGA 270
||||| || ||||| |||||||||||||||||||||||| |||| ||||||||||||||
Sbjct 201 AAGCTAGTGGGTCTGCTTCATGAAACTGGTTCAACAGAAATTGTGGTCTTGTGCCATGGC 260
Query 271 TTTCGATCTAA-CAAGAATAACCAAATTATGAATAATGTGGCTGCTGCTATAGAGAAAGA 329
|||||||| || ||||||| ||||| | ||||| ||||| ||||||||||||||||||||
Sbjct 261 TTTCGATC-AACCAAGAATGACCAAGTCATGAAAAATGTTGCTGCTGCTATAGAGAAAGA 319
Query 330 AGGAATCAGCGCTTTTCGTTTTGATTTCTCTGGGAATGGAGAGAGTGAAGGCAGTTTCTA 389
||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 320 AGGGATCAGCGCTTTCCGTTTTGATTTCTCTGGGAACGGAGAGAGTAAAGGCAGTTTCTA 379
Query 390 TTATGGTAACTATAACCATGAAGCTGATGATCTACATTCTGTTATCCAATACTTCACTAA 449
|| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 380 TTTTGGTAACTACAACTATGAAGCTGATGATCTACATTCTGTTATCCGATACTTCACTAA 439
Query 450 CAAGAACCGTGTGGTTCCTATCATTCTCGGGCATAGTAAGGGAGGTGATGTTGTTCTCCT 509
|| |||||||||||||||||| ||| | || || ||||| || |||||||| || ||| |
Sbjct 440 CATGAACCGTGTGGTTCCTATAATTATTGGCCACAGTAAAGGTGGTGATGTGGTCCTCGT 499
Query 510 CTATGCCTCCAAGTATCACGATGTCCGCAATGTAATCAATCTCTCGGGACGTTATGATCT 569
||||||||| |||||||| ||| | |||||||||||||||||||||||||||||||||||
Sbjct 500 CTATGCCTCGAAGTATCAAGATATTCGCAATGTAATCAATCTCTCGGGACGTTATGATCT 559
Query 570 TAAAAAAGGCATAAGAGAGCGTCTTGGTGAAGATTTTTTGGAAAGAATTAAGCAACAAGG 629
|| | ||||||| ||||||||||||| ||||||| |||||||||||| |||||||||||
Sbjct 560 GAAGAGAGGCATAGGAGAGCGTCTTGGGGAAGATTATTTGGAAAGAATAAAGCAACAAGG 619
Query 630 ATTCATTGATGTTGGAGATGGAAAATCGGGGTATCGTGTTACTGAGAAGAGTTTAATGGA 689
|||||| ||| || ||| ||||| | |||| ||||||||| ||| |||| ||||||||
Sbjct 620 ATTCATCGATATTAAAGAAGGAAACGCTGGGTTTCGTGTTACCGAGGAGAGCTTAATGGA 679
Query 690 CAGGTTAAGCACTGATATGCATGAAGCTTGCCTCAAGATTGACAAAGAATGCAGGGTCTT 749
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 680 AAGGTTAAACACTGATATGCATGAAGCTTGCCTCAAGATTGACAAAGAATGCAGGGTCTT 739
Query 750 GACGGTTCATGGATCGGCTGACGAGGTAATACGTGTGGAAGATGCGAAGGAGTTTGCGAA 809
|||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||
Sbjct 740 GACGGTTCATGGCTCGGCTGACGAGGTAATACCCCTGGAAGATGCCAAGGAGTTTGCAAA 799
Query 810 GATCATACCGAACCACAAGCTGGAGATTGTGGAAGGAGCTGATCATTGTTATACCGAGCA 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 800 GATCATACCGAACCACAAGCTGGAGATTGTGGAAGGAGCTGATCATTGTTATACCAAACA 859
Query 870 CCAAAGTCAATTAGTTTCAACA-GTTATGGAGTTCATAAAGACAGTCATTATGATGAACA 928
|||||||||||| || ||| | ||||||||||||||||||||||||||| ||| |||||
Sbjct 860 TCAAAGTCAATTAATTACAA-ATGTTATGGAGTTCATAAAGACAGTCATTGTGAAGAACA 918
Query 929 ACT 931
|||
Sbjct 919 ACT 921
> AT3G47560.2 | Symbols: | alpha/beta-Hydrolases superfamily protein
| chr3:17525486-17526978 REVERSE LENGTH=1047
Length=1047
Score = 379 bits (205), Expect = 2e-104
Identities = 257/283 (91%), Gaps = 0/283 (0%)
Strand=Plus/Plus
Query 368 GAGAGAGTGAAGGCAGTTTCTATTATGGTAACTATAACCATGAAGCTGATGATCTACATT 427
|||||||||||||||||||||||||||||||||| || | |||||||||||||||||||
Sbjct 300 GAGAGAGTGAAGGCAGTTTCTATTATGGTAACTACAATTACGAAGCTGATGATCTACATT 359
Query 428 CTGTTATCCAATACTTCACTAACAAGAACCGTGTGGTTCCTATCATTCTCGGGCATAGTA 487
||||||||||||||||| ||||| ||||||||| ||| |||| |||||||| || ||||
Sbjct 360 CTGTTATCCAATACTTCTCTAACTTGAACCGTGTTGTTACTATAATTCTCGGTCACAGTA 419
Query 488 AGGGAGGTGATGTTGTTCTCCTCTATGCCTCCAAGTATCACGATGTCCGCAATGTAATCA 547
| ||||||||||| || ||||||||||||||||||||||||||| ||| |||||| ||||
Sbjct 420 AAGGAGGTGATGTGGTCCTCCTCTATGCCTCCAAGTATCACGATATCCCCAATGTGATCA 479
Query 548 ATCTCTCGGGACGTTATGATCTTAAAAAAGGCATAAGAGAGCGTCTTGGTGAAGATTTTT 607
|||||||||||||||||||||| || ||||||||| |||| |||||||||||||||||||
Sbjct 480 ATCTCTCGGGACGTTATGATCTGAAGAAAGGCATAGGAGAACGTCTTGGTGAAGATTTTT 539
Query 608 TGGAAAGAATTAAGCAACAAGGATTCATTGATGTTGGAGATGG 650
|||||||||||||||||||||||| ||| |||||| ||||||
Sbjct 540 TGGAAAGAATTAAGCAACAAGGATACATCGATGTTAAAGATGG 582
Score = 318 bits (172), Expect = 5e-86
Identities = 233/263 (89%), Gaps = 2/263 (1%)
Strand=Plus/Plus
Query 664 CGTGTTACTGAGAAGAGTTTAATGGACAGGTTAAGCACTGATATGCATGAAGCTTGCCTC 723
|||||||| ||| ||||||| |||||| |||||| ||| |||||||||||||||||||||
Sbjct 674 CGTGTTACCGAGGAGAGTTTGATGGACCGGTTAAACACAGATATGCATGAAGCTTGCCTC 733
Query 724 AAGATTGACAAAGAATGCAGGGTCTTGACGGTTCATGGATCGGCTGACGAGGTAATACGT 783
|||||||||||||||||||||||||||||||| |||||||||| ||||||| | |||
Sbjct 734 AAGATTGACAAAGAATGCAGGGTCTTGACGGTCCATGGATCGGGTGACGAGACAGTACCA 793
Query 784 GTGGAAGATGCGAAGGAGTTTGCGAAGATCATACCGAACCACAAGCTGGAGATTGTGGAA 843
||||||||||| ||||||||||| ||||| |||||||||||| |||| |||||||||||
Sbjct 794 GTGGAAGATGCAAAGGAGTTTGCAAAGATAATACCGAACCACGAGCTACAGATTGTGGAA 853
Query 844 GGAGCTGATCATTGTTATACCGAGCACCAAAGTCAATTAGTTTCAACAGTTATGGAGTTC 903
||||||||||||||||||||| | | ||||||||||| |||| ||| ||||||||||||
Sbjct 854 GGAGCTGATCATTGTTATACCAATTATCAAAGTCAATTGGTTTTAACGGTTATGGAGTTC 913
Query 904 ATAAAGACAGTCATTATGATGAA 926
||||||| |||||| ||| |||
Sbjct 914 ATAAAGA--GTCATTGTGAAGAA 934
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45612605476
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5