BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg347926 Length=1086 Score E Sequences producing significant alignments: (Bits) Value AT3G48340.1 | Symbols: | Cysteine proteinases superfamily prot... 1724 0.0 > AT3G48340.1 | Symbols: | Cysteine proteinases superfamily protein | chr3:17897739-17899208 FORWARD LENGTH=1220 Length=1220 Score = 1724 bits (933), Expect = 0.0 Identities = 1038/1089 (95%), Gaps = 6/1089 (1%) Strand=Plus/Plus Query 1 ATGAAGCAACTTCTTTTGATATTTCTCTTTTCTCTTGTCATTCTCGAAACTGCTTGTGGA 60 |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1 ATGAAGAAACTTCTTTTGATATTTCTCTTTTCTCTTGTCATTCTCCAAACTGCTTGTGGA 60 Query 61 TTCGATTACGAAGACAAGGAAATAGAGAGCGAAGAGGGCTTATCAAAGCTTTATGACAGA 120 ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| ||| Sbjct 61 TTCGATTACGACGACAAGGAAATAGAAAGCGAAGAGGGCTTATCAACGCTTTATGATAGA 120 Query 121 TGGAGAAGCCACCATTCAGTTCCTAGGAGTCTCCATGAGAGGGAGAAGAGATTCAACGTT 180 ||||| |||||||| || |||||||||||||| |||| ||||||||||||||||||||| Sbjct 121 TGGAGGAGCCACCACTCCGTTCCTAGGAGTCTAAATGAAAGGGAGAAGAGATTCAACGTT 180 Query 181 TTCAGACACAATGTCATGCATGTTCATAACT-CCAACAAGAAGAACAGATCCTACAAACT 239 ||||||||||||||||||||||| || || | |||||||||||||| ||||||||||||| Sbjct 181 TTCAGACACAATGTCATGCATGTCCACAA-TACCAACAAGAAGAACCGATCCTACAAACT 239 Query 240 TAAGCTCAACAAGTTTGCAGACTTAACGATTCATGAGTTCAAGAATGCCTACACCGGTTC 299 ||||||||||||||||||||| ||||| ||| |||||||||||||||| ||||||||||| Sbjct 240 TAAGCTCAACAAGTTTGCAGATTTAACAATTAATGAGTTCAAGAATGCATACACCGGTTC 299 Query 300 TAAAATCAAGCATCACAGGATGTTGCAAGGACCAAAACGCGGCTCAAAACAGTTCATGTA 359 || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 300 CAACATCAAGCATCACAGAATGTTGCAAGGACCAAAACGCGGCTCAAAACAGTTCATGTA 359 Query 360 TGATCATGAGAATGTATCCAAATTACCGTCCTCCGTTGATTGGAGAAAGAAAGGTGCTGT 419 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 360 TGATCATGAGAATTTATCCAAATTACCGTCCTCCGTTGATTGGAGAAAGAAAGGTGCTGT 419 Query 420 CACTGAAATCAAGAATCAAGGAAAGTGTGGAAGTTGTTGGGCATTCTCAACCGTAGCAGC 479 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 420 CACTGAAATCAAGAATCAAGGAAAATGTGGAAGTTGTTGGGCATTCTCTACCGTAGCAGC 479 Query 480 TGTTGAGGGAATCAACAAGATCAAGACGAACAAGCTGGTCTCACTGTCTGAACAAGAATT 539 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| | Sbjct 480 TGTTGAGGGAATCAACAAGATCAAGACTAACAAACTGGTCTCACTGTCTGAACAAGAACT 539 Query 540 AGTGGATTGTGATACTAACCAGAATGAAGGTTGCAACGGAGGTCTTATGGAGATTGCATT 599 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 540 AGTGGATTGTGATACTAAGCAGAATGAAGGTTGTAACGGAGGTCTTATGGAGATTGCATT 599 Query 600 TGAATTCATCAAGAAGAATGGTGGAATCACCACCGAAGATAGCTATCCTTACGAAGGTAT 659 |||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||| Sbjct 600 TGAATTCATCAAGAAGAACGGTGGTATCACCACTGAAGATAGCTATCCTTATGAAGGTAT 659 Query 660 CGATGGAAAATGCGATGCTTCCAAGGATAACGGCGTGCTTGTGACGATAGATGGGCATGA 719 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 660 CGATGGAAAATGCGACGCTTCAAAGGATAACGGCGTGCTTGTGACGATAGATGGGCATGA 719 Query 720 AAATGTACCCGAAAACGACGAAAATGCTCTTCTTAAGGCTGTTGCAAACCAACCTGTATC 779 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 720 AGATGTACCCGAAAACGACGAAAATGCTCTTCTTAAGGCTGTTGCAAACCAACCTGTATC 779 Query 780 TGTTGCAATTGATGCTGGAAGTTCAGATTTCCAGTTTTATTCAGAGGGAGTGTTTACGGG 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 780 TGTTGCAATTGATGCTGGAAGTTCAGATTTCCAGTTTTATTCAGAGGGAGTGTTTACGGG 839 Query 840 AGATTGTGGAACAGAGCTGAACCATGGTGTGGCAACGGTCGGCTATGGATCTCAG-GGTG 898 | ||||||||||||||||||||||||||||||| ||||||| ||||||||| || || | Sbjct 840 ATCTTGTGGAACAGAGCTGAACCATGGTGTGGCAGCGGTCGGGTATGGATCTGAGAGG-G 898 Query 899 GGAAAAAGTATTGGATAGTGAGAAACTCATGGGG-GACTGAATGGGGAGAGGGAGGCTAT 957 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct 899 GGAAAAAGTATTGGATAGTGAGAAACTCATGGGGAG-CTGAATGGGGAGAGGGAGGCTAT 957 Query 958 ATAAAGATTGAAAGAGGGATTGATGAACCGGAAGGGCGTTGCGGTATTGCGATGGAAGCA 1017 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct 958 ATAAAGATTGAAAGAGAGATTGATGAACCGGAAGGGCGTTGCGGTATTGCGATGGAGGCA 1017 Query 1018 TCGTATCCGATCAAGCTATCGTCTTCTAATCCTACCCCGAAAGACGGTGATGTCAAAGAT 1077 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1018 TCGTATCCGATCAAGCTATCGTCGTCTAATCCTACCCCGAAAGACGGTGATGTCAAAGAT 1077 Query 1078 GAGCTCTAG 1086 ||||||||| Sbjct 1078 GAGCTCTAG 1086 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 53212577700 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5