BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg348065
Length=1035
Score E
Sequences producing significant alignments: (Bits) Value
AT3G49630.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 1312 0.0
AT3G49620.1 | Symbols: DIN11 | 2-oxoglutarate (2OG) and Fe(II)-... 1009 0.0
AT3G50210.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-depen... 760 0.0
> AT3G49630.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:18397759-18400255
FORWARD LENGTH=999
Length=999
Score = 1312 bits (710), Expect = 0.0
Identities = 807/853 (95%), Gaps = 9/853 (1%)
Strand=Plus/Plus
Query 185 ATTGGTCATGGAATATCGGAGGATCTTATAAAGAAGGTGAGAGTGATATGTCGAATCAAT 244
|||||||||||||||||||||||| |||||| ||||||||||||| |||||| ||||||
Sbjct 154 ATTGGTCATGGAATATCGGAGGATTTTATAAGGAAGGTGAGAGTG--ATGTCGCATCAAT 211
Query 245 TCTTTGAGCTTCCTTATGAAGAGAAACTTAAGATCAAGATTAGGCCAGCTGCTGGATACA 304
|||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 212 TCTTCGAGCTTCCTTATGAAGAGAAACTTAAGATCAAGATTACTCCAGCTGCTGGATACA 271
Query 305 GAGGATATCAGAGAATGGGACTAAACTTAACGAGTGGGAAACAAGACATGCACGAAGCCA 364
|||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||
Sbjct 272 GAGGATATCAGAGAATCGGACTAAACTTAACGAATGGGAAACAAGATATGCACGAAGCCA 331
Query 365 TTGATTGTTACAAAGAGTTTAATG-AAGGGACGTATGGGGACCTTGGAAAGGTTTTGGAA 423
|||||||||||||||||||||| | |||||| | |||||||| ||||||||||| |||||
Sbjct 332 TTGATTGTTACAAAGAGTTTAA-GCAAGGGAAGCATGGGGACATTGGAAAGGTTATGGAA 390
Query 424 GGGCCAAACCAGTGGCCAGAGAATCCTCAAGAGTACAAAGAGTTGATGGAGGAGTATATT 483
||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 391 GGGGCAAACCAGTGGCCAGAGAATCCTCAAGAATACAAAGAGTTGATGGAGGAGTATATT 450
Query 484 AAGCTCTGCATAGATCTTTCTAGAAATATCTTAAGGGGAATCTCCTTAGCCCTTGGTGGA 543
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 451 AAGCTCTGCATAGATCTTTCTAGAAATATCTTAAGGGGAATCTCATTAGCCCTTGGTGGA 510
Query 544 TCACCTTATGAATTTGAGGGAAAGATGCTTAGAGACGACCCTTTTTGGATAATGCGTATT 603
||||||||||| |||||||||||||||||| | | || || ||||||||||||||||||
Sbjct 511 TCACCTTATGAGTTTGAGGGAAAGATGCTT--ACA-GATCCGTTTTGGATAATGCGTATT 567
Query 604 CTTGGTTATCCAGGTGTAAACCAAGAAAATGTTATCGGATGTGGAGCTCACACTGACTAT 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 568 CTTGGTTATCCAGGTGTAAACCAAGAAAATGTTATCGGATGTGGAGCTCACACTGACTAT 627
Query 664 GGCTTGTTGTCGCTTATAAATCAAGATGATGACAAAACTGCTCTTCAGGTGAGAGACTTG 723
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 628 GGCTTGTTGTCACTTATAAATCAAGATGATGACAAAACTGCTCTTCAGGTGAGAGACTTG 687
Query 724 GCCGGCGATTGGACACCAGTGATTCCGATCCCTGGATCATTTGTCTGCAACATCGGTGAC 783
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 688 GCCGGCGATTGGATACCAGTTATTCCGATCCCTGGATCATTTGTCTGCAACATCGGTGAC 747
Query 784 ATGCTAAAGTTTCTTTCTAACGGAGTTTACGAATCCACACTTCATAGAGTGATCAATAAC 843
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 748 ATGCTAAAGATTCTTTCTAACGGAGTTTACGAATCCACACTTCATAGAGTGATCAATAAC 807
Query 844 TCTCCTCGATACCGTGTTTGCGTCGGATTCTTCTACGAGACTAACTTCAACGCGGTGGTG 903
||||| |||||||||||||||||||||||||| |||||||| |||||| |||| | ||||
Sbjct 808 TCTCCCCGATACCGTGTTTGCGTCGGATTCTTTTACGAGACGAACTTCGACGCAGCGGTG 867
Query 904 GAGCCATTGGATATCTTCAAAGAGAAGTACCCAGTAAAAGGAACATCTCAAGTTTTCAAA 963
||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct 868 GAGCCGTTGGATATCTTCAAAGAGAAGTACCCAGGAAAAGGAACATCCCAAGTTTTCAAA 927
Query 964 AGAATTGTCTATGGAGAGCATCTGGTTCACAAACTGCAGACCACCTTTACAAA-TTTAGT 1022
||| |||||||||| |||||||||||||||||||| |||||||| ||| |||| ||||||
Sbjct 928 AGAGTTGTCTATGGGGAGCATCTGGTTCACAAACTCCAGACCACTTTT-CAAAATTTAGT 986
Query 1023 GGAACACAGTTAA 1035
|||||||||||||
Sbjct 987 GGAACACAGTTAA 999
Score = 217 bits (117), Expect = 2e-55
Identities = 142/154 (92%), Gaps = 2/154 (1%)
Strand=Plus/Plus
Query 1 ATGGCGACAAACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAA 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGACAAACTTCAAATCCCTATTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAA 60
Query 61 TGTGATGATTCGAACATGGCCGAGGATGCCGACGTGGCAAAGGTTGTGAGGAAA-CTGGA 119
||||||||| | |||||||| |||||||||| |||||| |||||||| ||||| |||||
Sbjct 61 TGTGATGATGCCAACATGGCGGAGGATGCCGGCGTGGCGGAGGTTGTG-GGAAAGCTGGA 119
Query 120 CAAGGCCTGTCGGGATGCCGGATTCTTCTACGTA 153
|| |||||||||||| || |||||||||||||||
Sbjct 120 CAGGGCCTGTCGGGACGCAGGATTCTTCTACGTA 153
> AT3G49620.1 | Symbols: DIN11 | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:18393747-18396816
FORWARD LENGTH=1304
Length=1304
Score = 1009 bits (546), Expect = 0.0
Identities = 757/858 (88%), Gaps = 17/858 (2%)
Strand=Plus/Plus
Query 184 GATTGGTCATGGAATATCGGAGGATCTTATAAAGAAGGTGAGAGTGATATGTCGAATCAA 243
||||||||||||||||||||| ||||||||||| ||||||| | || ||| || ||||
Sbjct 304 GATTGGTCATGGAATATCGGATGATCTTATAAATAAGGTGA-A-AGAGATGACGCATCAG 361
Query 244 TTCTTTGAGCTTCCTTATGAAGAGAAACTTAAGATCAAGATTAGGCCAGCTGCTGGATAC 303
||||| ||||||||||| || |||||||||||||||||||||| ||| |||||||||||
Sbjct 362 TTCTTCGAGCTTCCTTACGAGGAGAAACTTAAGATCAAGATTACTCCAACTGCTGGATAC 421
Query 304 AGAGGATATCAGAGAATGGGACTAAACTTAACGAGTGGGAAACAAGACATGCACGAAGCC 363
|||||||| || ||||| ||| |||| || ||||||||||||||||| ||||||||||||
Sbjct 422 AGAGGATACCAAAGAATTGGAGTAAATTTTACGAGTGGGAAACAAGATATGCACGAAGCC 481
Query 364 ATTGATTGTTACAAAGAGTTTAATG-AAGGGACGTATGGGGACCTTGGAAAGGTTTTGGA 422
||||||||||||| |||||| || | |||||| |||||||| | |||||||| |||||
Sbjct 482 ATTGATTGTTACAGAGAGTTCAA-GCAAGGGAAACATGGGGACATCGGAAAGGTCTTGGA 540
Query 423 AGGGCCAAACCAGTGGCCA-GAGAATCCTCAAGAGTACAAAGAGTTGATGGAGGAGTATA 481
||||||||||||||||||| || |||||||||||||||||||| || |||||| ||||||
Sbjct 541 AGGGCCAAACCAGTGGCCAGGA-AATCCTCAAGAGTACAAAGATTTAATGGAGAAGTATA 599
Query 482 TTAAGCTCTGCATAGATCTTTCTAGAAATATCTTAAGGGGAATCTCCTTAGCCCTTGGTG 541
||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 600 TTAAGCTGTGCACAGATCTTTCTAGAAATATCTTAAGGGGAATCTCATTAGCCCTTGGTG 659
Query 542 GATCACCTTATGAATTTGAGGGAAAGATGCTTAGAGACGACCCTTTTTGGATAATGCGTA 601
||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||
Sbjct 660 GATCACCTTATGAGTTTGAGGGAAAGATGCTT--AGA-GACCCTTTTTGGGTAATGCGTA 716
Query 602 TTC-TTGGTTATCCAGGTGTAAACCAAGAAAATGTTATCGGATGTGGAGCTCACACTGAC 660
|| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 717 -TCATTGGTTATCCAGGTGTAAACCAAGAAAATGTTATTGGATGTGGAGCTCACACTGAC 775
Query 661 TATGGCTTGTTGTCGCTTATAAATCAAGATGATGACAAAACTGCTCTTCAGGTGAGAGAC 720
|||||||||||| |||||||||||||||||||||| ||||||||||||||||||| | ||
Sbjct 776 TATGGCTTGTTGACGCTTATAAATCAAGATGATGATAAAACTGCTCTTCAGGTGAAAAAC 835
Query 721 TTGGCCGGCGATTGGACACCAG-TGATTCCGATCCCTGGATCATTTGTCTGCAACATCGG 779
||| ||| ||||||| ||||| | ||||||||||||||||||||| |||||||||||||
Sbjct 836 GTGGACGGTGATTGGATACCAGCT-ATTCCGATCCCTGGATCATTTATCTGCAACATCGG 894
Query 780 TGACATGCTAAAGTTTCTTTCTAACGGAGTTTACGAATCCACACTTCATAGAGTGATCAA 839
||||||| ||| | | || || |||||||||||| |||||||||| |||| ||| |||||
Sbjct 895 TGACATGTTAACGATACTATCAAACGGAGTTTACCAATCCACACTACATAAAGTAATCAA 954
Query 840 TAACTCTCCTCGATACCGTGTTTGCGTCGGATTCTTCTACGAGACTAACTTCAACGCGGT 899
|||||||||| ||||||||| || || | ||| |||||||||||||||||| | ||||
Sbjct 955 TAACTCTCCTAAATACCGTGTATGTGTTGCATTTTTCTACGAGACTAACTTCGAGGCGGA 1014
Query 900 GGTGGAGCCA-TTGGATATCTTCAAAGAGAAGTACCCA-GTAAAAGGAACATCTCAAGTT 957
||| |||||| ||| ||||||| ||||||||| | ||| | ||||| |||||||||||||
Sbjct 1015 GGTAGAGCCACTTG-ATATCTTTAAAGAGAAGCATCCACG-AAAAGAAACATCTCAAGTT 1072
Query 958 TTCAAAAGAATTGTCTATGGAGAGCATCTGGTTCACAAACTGCAGACCACCTTTACAAAT 1017
||||||| | ||||||||| |||||||| || ||||| | | ||| |||||| |||||
Sbjct 1073 GCCAAAAGAGTCGTCTATGGACAGCATCTGATTAACAAAGTCCTGACAACCTTTGCAAAT 1132
Query 1018 TTAGTGGAACACAGTTAA 1035
||||||||| ||||||||
Sbjct 1133 TTAGTGGAAAACAGTTAA 1150
Score = 154 bits (83), Expect = 2e-36
Identities = 133/156 (85%), Gaps = 8/156 (5%)
Strand=Plus/Plus
Query 1 ATGGCGACAAACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTAGTGGTCAAA 60
|||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 152 ATGGTGACAGACTTCAAATCCCTACTACCAGTTATCGACATCAGTCCTTTACTGGCCAAA 211
Query 61 TGTGATGATT-CGAACATGGCCGAGGATGCCGACGT-G-GCAAAGGTTGTGAGGAAA-CT 116
|||||||||| ||| |||||| |||||||| | || | | || | | || ||||| ||
Sbjct 212 TGTGATGATTTCGA-CATGGCTGAGGATGCGGGGGTTGTGGAA-G-TAGTC-GGAAAACT 267
Query 117 GGACAAGGCCTGTCGGGATGCCGGATTCTTCTACGT 152
||||| ||| |||||||| | |||||||||||||||
Sbjct 268 GGACAGGGCATGTCGGGACGTCGGATTCTTCTACGT 303
> AT3G50210.1 | Symbols: | 2-oxoglutarate (2OG) and Fe(II)-dependent
oxygenase superfamily protein | chr3:18614170-18616452
REVERSE LENGTH=1390
Length=1390
Score = 760 bits (411), Expect = 0.0
Identities = 714/855 (84%), Gaps = 41/855 (5%)
Strand=Plus/Plus
Query 184 GATTGGTCATGGAATATCGGAGGATCTTATAAAGAAGGTGAGAGTGAT-ATGTCGAATCA 242
||| || ||||||||||| |||||| |||| || ||||| |||| ||| | ||| | |
Sbjct 373 GATAGGCCATGGAATATCAGAGGATGTTATTAACAAGGTTAGAGAGATCA-CTCG--TGA 429
Query 243 ATTCTTTGAGCTTCCTTATGAAGAGAAACTTAAGATCAAGATTAGGCCAGCTGCTGGATA 302
|||||| ||||||||||||||||||||||||| ||||| || | ||||||||||||||
Sbjct 430 GTTCTTTAAGCTTCCTTATGAAGAGAAACTTAAAATCAAAATGACTCCAGCTGCTGGATA 489
Query 303 CAGAGGATATCAGAGAATGGGACTAAACT-TAACGAGTGGGAA-ACAAGACATGCACGAA 360
|||||||||||||||||| ||| ||| | | || | |||| || ||| || || |||
Sbjct 490 CAGAGGATATCAGAGAATTGGA-GAAAATGTGACCA-AAGGAATACCAGATATTCATGAA 547
Query 361 GCCATTGATTGTTACAAAGAGTTTAATG-AAGGGACGTATGGGGACCTTGG-AAAGGTTT 418
|||||||||||||||| |||| |||| | | |||| ||||||||| | || ||| |||
Sbjct 548 GCCATTGATTGTTACAGAGAGATTAA-GCAGGGGAAGTATGGGGATATAGGCAAA-GTTA 605
Query 419 TGGAAGGGCCAAACCAGTGGCCAGAGAATCCTCAAGAGTACAAAGAGTTGATGGAGGAGT 478
|||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 606 TGGAAGGGCCAAACCAGTGGCCAGAGAATCCTCAGGAGTTTAAAGAGTTGATGGAGGAGT 665
Query 479 ATATTAAGCTCTGCATAGATCTTTCTAGAAATATCTTAAGGGGAATCTCCTTAGCCCTTG 538
|||||||||| || | ||||||||||||||| || || || |||||||||||||| ||||
Sbjct 666 ATATTAAGCTATGTACAGATCTTTCTAGAAAGATTTTGAGAGGAATCTCCTTAGCTCTTG 725
Query 539 GTGGATCACCTTATGAATTTGAGGGAAAGAT-GCTTAGAGACGACCCTTTTTGGATAATG 597
||||||||||||||| || ||||||||||| || | | | || ||||||||| | |||
Sbjct 726 CTGGATCACCTTATGAGTTCGAGGGAAAGATGGC-T-G-G-TGATCCTTTTTGGGTGATG 781
Query 598 CGTATTCTTGGTTATCCA-G-G-T--G-T---AAA---CCAA---GAAAATGTTATCGGA 642
||| || ||||||||||| | | | | | ||| |||| ||||||| ||| |||
Sbjct 782 CGTCTTATTGGTTATCCAGGTGCTGAGTTCACAAATGGCCAACCTGAAAATGATATTGGA 841
Query 643 TGTGGAGCTCACACTGACTATGGCTTGTTGTCGCTTATAAATCAAGATGATGACAAAACT 702
||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||||
Sbjct 842 TGTGGAGCTCACACTGACTATGGCTTGTTAACTCTTGTGAATCAAGATGATGACAAAACT 901
Query 703 GCTCTTCAGGTGAGAGACTTGGCCGGCGATTGGACACCAGTGATTCCGATCCCTGGATCA 762
||||||||||||||| |||||| ||| || |||| | ||| ||||| |||||||||||
Sbjct 902 GCTCTTCAGGTGAGAAACTTGGGCGGTGAGTGGATATCAGCCATTCCAATCCCTGGATCG 961
Query 763 TTTGTCTGCAACATCGGTGACATGCTAAAGTTTCTTTCTAACGGAGTTTACGAATCCACA 822
||||| |||||||||||||||||| ||||| | ||||| |||||||| ||||||||||||
Sbjct 962 TTTGTTTGCAACATCGGTGACATGTTAAAGATACTTTCAAACGGAGTATACGAATCCACA 1021
Query 823 CTTCATAGAGTGATCAATAACTCTCCTCGATACCGTGTTTGCGTCGGATTCTTCTACGAG 882
|||||||||||||||||||||||||||| |||||||||||| |||| ||||||||| |||
Sbjct 1022 CTTCATAGAGTGATCAATAACTCTCCTCAATACCGTGTTTGTGTCGCATTCTTCTATGAG 1081
Query 883 ACTAACTTCAACGCGGTGGTGGAGCCATTGGATATCT-TCAAAGAGAAGTACCCAGTAA- 940
||||||||| ||||||||||||||||||||||||| | | ||| |||||||||| | |
Sbjct 1082 ACTAACTTCGACGCGGTGGTGGAGCCATTGGATATATGT-AAACAGAAGTACCCGGGAGG 1140
Query 941 -A-AGGAACAT-CTCAAGTTTTCAAAAGAATTGTCTATGGAGAGCATCTGGTTCAC-AAA 996
| |||| || | ||||||||||||||| ||| |||||||||||||| || | |||
Sbjct 1141 GAGAGGAGGATGC-CAAGTTTTCAAAAGAGCTGTGTATGGAGAGCATCTCGTA-AGTAAA 1198
Query 997 CTGCAGACCACCTTT 1011
| ||||||| ||||
Sbjct 1199 GTCCAGACCAACTTT 1213
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 50736488470
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5