BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg348401 Length=501 Score E Sequences producing significant alignments: (Bits) Value AT3G53070.1 | Symbols: | Putative membrane lipoprotein | chr3:... 324 6e-88 > AT3G53070.1 | Symbols: | Putative membrane lipoprotein | chr3:19674533-19674942 FORWARD LENGTH=318 Length=318 Score = 324 bits (175), Expect = 6e-88 Identities = 198/209 (95%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 173 GGAGTTCTCTTCCTAAGTTGGGCAATCAGATTCCAGTTTGTCGTCACCAAAACAGGTCTA 232 ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 87 GGACTTCTCTT-CTAAGTTGGGCAATCAGATTCCAGTTTGTCGTCATCAAAACAGGTCTA 145 Query 233 GGGCCCCTGTATTGATGTTTGATTGCAAAGAGAAAGGATATGTTTTCACAAAGATCAATT 292 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 146 GGGCCCCTGTATTGATGTTTGATTGCAAAGAGAAAGGATATGTTTTCTCAAAGATCAATT 205 Query 293 TCGCCGACTATGGCCATGCAAGTGGTGATTGTGGTAACTTTAGACGTGGTAATTGCGGCG 352 ||||||||||||||||| |||||||||||||||||||||||||||| || | ||| || | Sbjct 206 TCGCCGACTATGGCCATTCAAGTGGTGATTGTGGTAACTTTAGACGCGGCACTTGTGGTG 265 Query 353 CACCCGATACCTTGAGGCTCGTCAAAAAG 381 ||||||||||||||||||| ||||||||| Sbjct 266 CACCCGATACCTTGAGGCTTGTCAAAAAG 294 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 23911453972 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5