BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg350119 Length=426 Score E Sequences producing significant alignments: (Bits) Value AT5G08535.1 | Symbols: | D111/G-patch domain-containing protei... 715 0.0 AT3G52350.1 | Symbols: | D111/G-patch domain-containing protei... 401 2e-111 > AT5G08535.1 | Symbols: | D111/G-patch domain-containing protein | chr5:2762029-2763436 FORWARD LENGTH=788 Length=788 Score = 715 bits (387), Expect = 0.0 Identities = 413/426 (97%), Gaps = 0/426 (0%) Strand=Plus/Plus Query 1 ATGGGAGATTCCTCGGTTTCGACAAGTTCATGGGCTGCCATTGACTCTGCTAATAGGTTT 60 ||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct 247 ATGGGAGATTCCTCGGTTTCGACAAGTTCATGGGCTGTCATTGAATCTGCTAATAGGTTT 306 Query 61 CAGGTGTCGAACGTTATGGGTGAGTCCTCTGGATCAAGCAGTTCATTGGCTGCTATAAAT 120 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 307 CAGGTGTCGAGCGTTATGGGTGAGTCCTCTGGATCAAGCAGTTCATTGGCTGCTATAAAT 366 Query 121 TCGTCCAACATTGGGTTTCAGCTCCTAAAGAAGCATGGCTGGAAGGAAGGCACTGGTCTT 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 367 TCGTCCAACATTGGGTTTCAGCTCCTAAAGAAGCATGGCTGGAAGGAAGGCACTGGTCTT 426 Query 181 GGAATCACTGAACAGGGTATATTGGTGCCTGTACAGGCAGAGCCAAAACATAACAAACGA 240 |||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 427 GGAATCGCTGAACAGGGTATATTGGTGCCTCTACAAGCAGAGCCAAAACATAACAAACGA 486 Query 241 GGACTGGGAGCTAAACAACCAGCTAAGAGAAAACCGGCACAGCCTCAGGCTAAGGATGAA 300 ||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 487 GGAGTGGGAGCTAAACAACCAGCTAAGAGAAAAGTGGCTCAGCCTCAGGCTAAGGATGAA 546 Query 301 GAAGTCTCAAAGCAGAGCAAGAAACTTTCAAAGAAAATGCGGAAGATGATGGAGCACGAA 360 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct 547 GAAGTCTCAAAGCAGAGTAAGAAACTTTCGAAGAAAATGCGGAAGATGATGGAGCACGAA 606 Query 361 AAACATTTACAGGAAAAAGAATTTGAACGAGCCTTCTGTAGGGAGTTCTGGCCCGATAAT 420 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 607 AAACATTTACAGGAAAAAGAATTTGAACGAGCCTTCTTTAGGGAGTTCTGGCCCGATAAT 666 Query 421 GTATAA 426 |||||| Sbjct 667 GTATAA 672 > AT3G52350.1 | Symbols: | D111/G-patch domain-containing protein | chr3:19409606-19410148 REVERSE LENGTH=543 Length=543 Score = 401 bits (217), Expect = 2e-111 Identities = 321/370 (87%), Gaps = 11/370 (3%) Strand=Plus/Plus Query 64 GTGTCGAACGTTA-TGGGTGAGTCCTCTGGATCAAGCAGTTCATTGGCTGCTATAAATTC 122 ||||| || |||| |||| || || |||| |||||||| | ||| | ||||||| | ||| Sbjct 178 GTGTCCAATGTTATTGGG-GATTCTTCTGAATCAAGCAATCCATCGACTGCTATCAGTTC 236 Query 123 GTCCAACATTGGGTTTCAGCTCCTAAAGAAGCATGGCTGGAAGGAAGGCACTGGTCTTGG 182 || |||||||| ||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 237 TTCTAACATTGGTTTTCAGCTCCTAAAGAAGCATGGCTGGAAGGAAGGAACTGGTCTAGG 296 Query 183 AATCACTGAACAGGGTATATTGGTGCCTGTACAGGCAGAGCCAAAACATAACAAACGAGG 242 |||||||||||| ||||||||||||||| |||| ||||| |||||||||||||||| ||| Sbjct 297 AATCACTGAACAAGGTATATTGGTGCCTCTACAAGCAGAACCAAAACATAACAAACAAGG 356 Query 243 ACTGGGAGCT-AAACAACCAGCTAAGAGAAAACCGGCACAGCCTCAGGCTA-AGGAT--G 298 ||| |||||| ||| ||||||| ||||||||||||||||||||||||| || || | | Sbjct 357 ACTAGGAGCTGAAA-AACCAGCCAAGAGAAAACCGGCACAGCCTCAGGATACAGCTTTTG 415 Query 299 AAGAAGTCTCAAAGCAGAGCAAGAAACTTTCAAAGAAAAT-GCGGAAGATGATGGAGCAC 357 ||||||| |||||| |||||||||||||||| |||||| | | | |||||||| |||||| Sbjct 416 AAGAAGTATCAAAGAAGAGCAAGAAACTTTCTAAGAAATTAGTG-AAGATGATCGAGCAC 474 Query 358 GAAAAAC-ATTTACAGGAAAAAGAATTTGAACGAGCCTTCTGTAGGGAGTTCTGGCCCGA 416 ||||||| ||| | |||||| |||||||||||||||||| | |||||||||||||| || Sbjct 475 GAAAAACGATTGGC-GGAAAACGAATTTGAACGAGCCTTCCGCAGGGAGTTCTGGCCTGA 533 Query 417 TAATGTATAA 426 |||||||||| Sbjct 534 TAATGTATAA 543 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20207635098 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5