BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg351250

Length=495
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G22240.1 | Symbols: ATOFP10, OFP10 | Ovate family protein | ...   604    2e-172


> AT5G22240.1 | Symbols: ATOFP10, OFP10 | Ovate family protein 
| chr5:7364689-7365279 FORWARD LENGTH=591
Length=591

 Score =  604 bits (327),  Expect = 2e-172
 Identities = 426/472 (90%), Gaps = 14/472 (3%)
 Strand=Plus/Plus

Query  6    TTTGAAGAAGAAGATGAAGAATGCACTCAAAACCATATTTAGTCCAATTTTTATGGCGTG  65
            ||| ||||||| ||||||| ||  ||||||||||||||| |  || |||||||||||   
Sbjct  126  TTTCAAGAAGATGATGAAGTATATACTCAAAACCATATTCAAACCCATTTTTATGGC---  182

Query  66   TGGTTGTTGCGGTTGCGGCTCTACCGTTCTGCCTTCCTCTCACAACCACTACTACACCCC  125
                   ||||||||||||||||||||||  |||||||||||| | | | ||||||||||
Sbjct  183  ------ATGCGGTTGCGGCTCTACCGTTCCACCTTCCTCTCAC-AGC-C-ACTACACCCC  233

Query  126  GGGACCACCGGTTTCTCCCACGGTTTTACGCAGCCCATGTCCTAAGATCGATGAAAGCGT  185
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  234  GGGACCACCGGTTTCTCCCACGGTTTTACGCAGCCCATGTCCTAAGATCGATGAGAGCGT  293

Query  186  CGCGATGGCTAAGGAATCAATCAATCCGTTCGAAGATTACAAGAAGTCGATGAACCAGAT  245
            |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct  294  CGCGATGGCTAAAGAATCAATCAATCCGTTCGAAGATTACAAGAAGTCGATGAATCAGAT  353

Query  246  GATCGAAGAGAGATATATCGAGACTGAA-GATGATCTTAAGGAGCTTTTAAGGTGTTTCT  304
            |||||||||||||||||||||||| ||| | ||| |||||||||||| ||||||||||||
Sbjct  354  GATCGAAGAGAGATATATCGAGACGGAAAG-TGAACTTAAGGAGCTTCTAAGGTGTTTCT  412

Query  305  TGGACATAAACCCTTCTCCTCAACACAATCTTATCGTCCGTGCTTTTGTGGACGTCTGTT  364
            ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct  413  TGGACATAAACCCTTCTCCTCAACACAATCTCATCGTCCGTGCTTTTGTCGACGTCTGTT  472

Query  365  CACAGCTACGGCCAGCACACGACCGTCGTGGGAAGTCACTTGGGAGATTGCTTCGTCTAT  424
            |||| || |  ||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  473  CACATCTCCAACCACCACACGACCGACGTGGGAAGTCACTTGGGAGATTGCTTCGTCTAT  532

Query  425  ATGTTAACAATCCTCTTGATAGTAATGATAATGACACACACCAAACCTCTTC  476
            |||||||||||||||||||||  |||||| ||||| |||||||||| |||||
Sbjct  533  ATGTTAACAATCCTCTTGATAACAATGATGATGACTCACACCAAACTTCTTC  584



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 23610049090


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5