BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg351537 Length=441 Score E Sequences producing significant alignments: (Bits) Value AT1G70160.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 484 2e-136 > AT1G70160.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27020.1); Has 108 Blast hits to 108 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). | chr1:26419949-26422529 FORWARD LENGTH=1966 Length=1966 Score = 484 bits (262), Expect = 2e-136 Identities = 304/325 (94%), Gaps = 0/325 (0%) Strand=Plus/Plus Query 101 AGGATCTAAATTTGTGTGGGATACTTGAAGAAATAGCGAGGCGTGGAATGTCATTCGATG 160 ||||||| |||||| ||||||||||||||||| ||||||||||||||||||||| |||| Sbjct 1367 AGGATCTGGATTTGTATGGGATACTTGAAGAAACAGCGAGGCGTGGAATGTCATTTGATG 1426 Query 161 AATTACTCACCATCCCTGAACAGGATGAATGGGTTTATAGTGACGGGAAATCAACAGCAT 220 | |||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||| ||| Sbjct 1427 AGTTACTCACCATCCCTGAACAGGATGAGTGGGTTTATAGCGACGGTAAATCGACAACAT 1486 Query 221 GTGTTGCTTTCATCCTTGCAATGTACAAAGCCGCTGGTGTATTCGGCCCTCTCGCTAATC 280 ||||||||||||||||||||||||||||||| |||||| |||||| |||||||||| ||| Sbjct 1487 GTGTTGCTTTCATCCTTGCAATGTACAAAGCTGCTGGTATATTCGACCCTCTCGCTGATC 1546 Query 281 ACATTCAAGTCACTGAATTCACGATCCGAGATGCGTACACTCCGAAGTTATTTGAGTCTA 340 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 1547 ACATTCAAGTCACTGAATTCACTATCCGAGATGCGTACACTCTGAAGTTATTTGAGTCTA 1606 Query 341 ACCAGACTCGGCTACCGAGTTGGTGCAACACAGAGGAAGAGAAGCTTGACTTCTGTCAGA 400 ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||| | Sbjct 1607 ACCAGACTCGGTTACCGAGTTGGTGCAACACCGAGGAAGGGAAGCTTGACTTCTGTCAAA 1666 Query 401 TTCTAGGTGAATACAGAATGGAGTT 425 ||||||||||||||||||||||||| Sbjct 1667 TTCTAGGTGAATACAGAATGGAGTT 1691 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 20961651333 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5