BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg351553 Length=849 Score E Sequences producing significant alignments: (Bits) Value AT5G25415.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1105 0.0 AT5G60380.1 | Symbols: | Protein of Unknown Function (DUF239) ... 209 3e-53 > AT5G25415.1 | Symbols: | Protein of Unknown Function (DUF239) | chr5:8834206-8837248 FORWARD LENGTH=1118 Length=1118 Score = 1105 bits (598), Expect = 0.0 Identities = 742/808 (92%), Gaps = 24/808 (3%) Strand=Plus/Plus Query 62 CCCTAGTTCGTTCAGATCAAAATACGTTGCCTCTCAGATCCTTCAAGATAAGTGAAAATG 121 ||||||||||||| |||| || |||||||||||||||||||||||| |||||||||||| Sbjct 175 CCCTAGTTCGTTCTGATC--AA-ACGTTGCCTCTCAGATCCTTCAAGTTAAGTGAAAATG 231 Query 122 CTAAATACGATTGTGTAGATATTTTTAAGCAACCAGGACTTAATCATCCCTTGCTCCAAA 181 ||| |||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 232 CTACATACGATTGTCTAGATATTTTTAAGCAACCAGGACTTAATCATCCCTCGCTTCAAA 291 Query 182 ACCACACAATCCAGATTGCTGGAGTAAGGTCACGTGCTGGTCCATTTCATGGTGTAGAAG 241 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 292 ACCACACAATCCAGATTGCTGGAGTAAGGTCACGTGCTGGTCCATATCATGGTGTAGAAG 351 Query 242 CTTGGTATGATGGATATGCGCTAAACGTTGGACGATATCAGATTTCATATAGCCAAATAT 301 |||||| | |||||||| |||||||||||||||||| ||||||||||||| |||||||| Sbjct 352 CTTGGTTTAATGGATATAAGCTAAACGTTGGACGATACCAGATTTCATATACCCAAATAT 411 Query 302 TTATAGGCAGTCGATTGAATAACCAAAACAATTTTATCCAAGCGGGTTATATTATAAATC 361 |||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||| Sbjct 412 TTATAGGCAGTCGACTGAATAACCAAGACAATTTTATCCAAGCGGGTTATATTATTAATC 471 Query 362 CAGGTTTCTTTCGCACCGGACAACTTTGGACGTATGCATTTTGGAAGGGTAAAGATGGAA 421 ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 472 CAGGTTTCTTTGGCACCGGACAACTTTGGACGTATGGATTTTGGAAGGGTAAAGATGGAA 531 Query 422 AAGGATGTTACAATACAGCATTTGATGGGTTTATTCAGGTTTCGAGAAAAATTCCCATAG 481 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 532 AAGGATGTTACAATACAGCATGTGATGGGTTTATTCAGGTTTCGAGAAAAATTCCCATAG 591 Query 482 TCCAACCCATAGACCTTAAGCCAGGAGTCCCTGATTGGTCGCGTTGGTCCATCCATCAG- 540 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 592 TCCAACCCATAGACCTTAAGCCAGGAGTCCCTGACTGGTCGCGTTGGTCCATCCATCAGG 651 Query 541 A-AA------T-----T-GGTGGCTTACTCAA-TAT--CGAA-TGGACCTAACGAAGATA 583 | || | | |||||||||| ||| | | | || || |||||||||||||| Sbjct 652 ATAAAGGAACTGGAAATTGGTGGCTTACACAAATCTTACAAAATGCACCTAACGAAGATA 711 Query 584 TTGGATATTGGTCAAAAGAGCTCTTTAATCTTATTGACAATGGTGCTACTACGGTTGGAG 643 ||||||||||| |||||||| | |||||||||||| | |||||||||||||||||||||| Sbjct 712 TTGGATATTGGCCAAAAGAGTTATTTAATCTTATTAATAATGGTGCTACTACGGTTGGAG 771 Query 644 TTGGGGGTGCAGTACAAGCTTCTGGTTCAGGTGAAAGTCCCCCGATGGGTAATGGTAATT 703 |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 772 TTGGAGGTGCAGTACAAGCTTCTGGTTCAGGTTCAAGTCCCCCGATGGGTAATGGTAATT 831 Query 704 TTCCAGTGGGAGGCCGCTTAGACTCAGCATTGGTTACAAATATTGAAGTTTTGGATTCCA 763 ||||||| ||||||||| ||| |||||| | ||||||||||||||||||||||||||| Sbjct 832 TTCCAGTTGGAGGCCGCGCAGATTCAGCAATATTTACAAATATTGAAGTTTTGGATTCCA 891 Query 764 ACTATAAC-AATCGTAAAATGAATTCTTTTCCTACTGAGATTATGGTAGATAGTCCAAAA 822 |||||||| || |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 892 ACTATAACCAA-CGTAAAATGAATTCTTTTCCTACTGAAATTATGGTAGATAGTCCAAAA 950 Query 823 TGTTATGGGGTAAGA-TTGGTAAGGTGA 849 || |||||| ||||| |||||||||||| Sbjct 951 TGCTATGGGTTAAGAATTGGTAAGGTGA 978 > AT5G60380.1 | Symbols: | Protein of Unknown Function (DUF239) | chr5:24285920-24287808 FORWARD LENGTH=1122 Length=1122 Score = 209 bits (113), Expect = 3e-53 Identities = 171/199 (86%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 1 ATGTCTACAACAATTAAGATAACTCTGGTTTTGAATCTCTTGCATCTATTGTTCGT-AGC 59 ||||||||||||| || ||| ||||| ||| ||||||| |||| ||| |||||| | || Sbjct 1 ATGTCTACAACAACTAGGATCACTCTTGTTATGAATCTTTTGCCTCTTTTGTTC-TCAGT 59 Query 60 AGCCCTAGTTCGTTCAGATCAAAATACGTTGCCTCTCAGATCCTTCAAGATAAGTGAAAA 119 ||| |||||| |||| | |||| |||| ||||||||||||||||||||||||||||||| Sbjct 60 AGCTCTAGTTGGTTCGGTTCAATGTACGGTGCCTCTCAGATCCTTCAAGATAAGTGAAAA 119 Query 120 TGCTAA-ATACGATTGTGTAGATATTTTTAAGCAACCAGGACTTAATCATCCCTTGCTCC 178 || | | ||||||||| ||||||||| ||| |||||||||||| ||||| |||||||| Sbjct 120 TG-TGACATACGATTGCATAGATATTTATAAACAACCAGGACTTGATCATTCCTTGCTCA 178 Query 179 AAAACCACACAATCCAGAT 197 ||||||||||||||||||| Sbjct 179 AAAACCACACAATCCAGAT 197 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 41392937128 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5