BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg352016
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
AT4G09500.2 | Symbols: | UDP-Glycosyltransferase superfamily p... 584 2e-166
AT2G22930.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 512 1e-144
AT5G54010.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 246 1e-64
> AT4G09500.2 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr4:6018135-6019759 FORWARD LENGTH=1625
Length=1625
Score = 584 bits (316), Expect = 2e-166
Identities = 391/428 (91%), Gaps = 2/428 (0%)
Strand=Plus/Plus
Query 78 AGAAGGGTTCGAGGAGCGGGTGAAAGGCCGTGGTGTGGTATGGGGAGGATGGGTACATCA 137
|||||||||||||||||||||||||| |||||||| || |||||||||||||| || ||
Sbjct 1018 AGAAGGGTTCGAGGAGCGGGTGAAAGATCGTGGTGTTGTTTGGGGAGGATGGGTGCAACA 1077
Query 138 ACCTTTGATATTGGCTCATCCATCAATAGGCTGCTTTGTGAACCATTGTGGTCCCGGAAA 197
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1078 ACCTTTGATATTGGCTCATCCATCAATAGGTTGCTTTGTGAACCATTGTGGTCCCGGAAC 1137
Query 198 AATATGGGAGGCTTTGGTGAGTGATTGCCAAATGGTTTTGATTCCATTTTTAAGTGATCA 257
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 AATATGGGAGTCTTTGGTGAGTGATTGCCAAATGGTTTTGATTCCATTTTTAAGTGATCA 1197
Query 258 ACTACTCTCCACAAAATTGATGACCGAGGAATCCGAGGTCTCTGTAGAAGTGTATAGGGA 317
| | |||| ||||| ||||||||||||||||| ||||||||||||||||||| |||||
Sbjct 1198 AGTTCTCTTCACAAGATTGATGACCGAGGAATTCGAGGTCTCTGTAGAAGTGCCGAGGGA 1257
Query 318 AAAAACAGGATGGTTTTCAAAGGAGAGCTTGAG-ATATGCGATCAAGTCTGTGATGTATA 376
||||||||||||||||||||||||||||||||| | |||| ||||| ||||||||| |||
Sbjct 1258 AAAAACAGGATGGTTTTCAAAGGAGAGCTTGAGCA-ATGCTATCAAATCTGTGATGGATA 1316
Query 377 AAGAGAGTGGCCTCGGGAAGCTAGTGAGGAGTAACCACACCAAGTTGAAGGAGATTTTGG 436
|||| |||| | | |||||| |||||||||||||||||||||| |||||||||||||| |
Sbjct 1317 AAGACAGTGACATTGGGAAGTTAGTGAGGAGTAACCACACCAAATTGAAGGAGATTTTAG 1376
Query 437 TTAGTCCTGGATTATTGACCAGTTACGTGGATAACTTTGTTGAGGCATTGCAAGAGGATT 496
||||||||||||||||||| ||||||| ||| ||||||| |||| |||||||||| |||
Sbjct 1377 TTAGTCCTGGATTATTGACTGGTTACGTTGATCACTTTGTAGAGGGATTGCAAGAGAATT 1436
Query 497 TGATCTGA 504
|||| |||
Sbjct 1437 TGATTTGA 1444
> AT2G22930.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr2:9759673-9761163 FORWARD LENGTH=1491
Length=1491
Score = 512 bits (277), Expect = 1e-144
Identities = 380/430 (88%), Gaps = 6/430 (1%)
Strand=Plus/Plus
Query 78 AGAAGGGTTCGAGGAGCGGGTGAAAGGCCGTGGTGTGGTATGGGGAGGATGGGTACATCA 137
|||||||||| |||||||||||||||| ||||||||||| |||||||||||||| || ||
Sbjct 996 AGAAGGGTTCCAGGAGCGGGTGAAAGGGCGTGGTGTGGTTTGGGGAGGATGGGTGCAACA 1055
Query 138 ACCTTTGATATTGGCTCATCCATCAATAGGCTGCTTTGTGAACCATTGTGGTCCCGGAAA 197
||| |||||||||| |||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 1056 ACCATTGATATTGGATCATCCGTCAATAGGCTGCTTTGTGAACCATTGTGGTCCGGGAAC 1115
Query 198 AATATGGGAG-GCT-TTGGTGAGTGATTGCCAAATGGTTTTGATTCCATTTTTAAGTGAT 255
|||||||||| | | || ||| |||||| |||||||||||| ||||||||||| |||||
Sbjct 1116 AATATGGGAGTG-TCTT-ATGACTGATTGTCAAATGGTTTTGCTTCCATTTTTAGGTGAT 1173
Query 256 CAACTACTCTCCACAAAATTGATGACCGAGGAATCCGAGGTCTCTGTAGAAGTGTATAGG 315
||| | |||| ||||| ||||||||||||||||| | |||| ||||||||||||| ||
Sbjct 1174 CAAGTTCTCTTCACAAGATTGATGACCGAGGAATTCAAGGTGTCTGTAGAAGTGTCGAGA 1233
Query 316 GAAAAAACAGGATGGTTTTCAAAGGAGAGCTTGAGATATGCGATCAAGTCTGTGATGTAT 375
||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 1234 GAAAAAACAGGATGGTTTTCAAAGGAGAGCTTGAGCGATGCGATCAAGTCTGTGATGGAT 1293
Query 376 AAAGAGAGTGGCCTCGGGAAGCTAGTGAGGAGTAACCACACCAAGTTGAAGGAGATT-TT 434
||||| || | |||||| ||||||||||||||||||||| |||| |||||||||| | ||
Sbjct 1294 AAAGATAGCGACCTCGGAAAGCTAGTGAGGAGTAACCACGCCAAATTGAAGGAGACTCTT 1353
Query 435 GGTTAGTCCTGGATTATTGACCAGTTACGTGGATAACTTTGTTGAGGCATTGCAAGAGGA 494
||| |||| ||||||||| || ||||||||||||| ||||| |||| |||||||||| |
Sbjct 1354 GGT-AGTCATGGATTATTAACTGGTTACGTGGATAAATTTGTAGAGGAATTGCAAGAGTA 1412
Query 495 TTTGATCTGA 504
|||||| |||
Sbjct 1413 TTTGATTTGA 1422
> AT5G54010.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr5:21919781-21921189 REVERSE LENGTH=1409
Length=1409
Score = 246 bits (133), Expect = 1e-64
Identities = 304/386 (79%), Gaps = 13/386 (3%)
Strand=Plus/Plus
Query 75 CCAAGAAGGGTTCGAGGAGCGGGTGAAAGGC-CGTGGTGTGGTATGGGGAGGATGGGTAC 133
|||| ||||||| || ||| |||| ||| || ||||| ||||| |||||||||||||| |
Sbjct 928 CCAA-AAGGGTTTGAAGAGAGGGTTAAA-GCACGTGGAGTGGTTTGGGGAGGATGGGTGC 985
Query 134 ATCAACCTTTGATATTGGCTCATCCATCAATAGGCTGCTTTGTGAACCATTGTGGTCCCG 193
| ||||| |||||||| |||||||||||||||||||||||||||| |||||||||| ||
Sbjct 986 AGCAACCATTGATATTAGCTCATCCATCAATAGGCTGCTTTGTGAGCCATTGTGGTTTCG 1045
Query 194 GAAAAATATGGGAGGCTTTGGTGAGTGATTGCCAAATGGT-TTTGATTCCATTTTTAAGT 252
| ||| ||||||||| | |||| ||| |||||||| || ||| |||||| ||| ||
Sbjct 1046 GGTCAATGTGGGAGGCTCTAGTGAATGACTGCCAAATAGTGTTT-ATTCCACATTTGGGT 1104
Query 253 GATCAACTACTCTCCACAAAATTGATGACCGAGGAA-TCCGAGGTCTCTGTAGAAGTGTA 311
|| ||| || | ||||| | |||||| ||||||| || ||||||| ||||| ||| |
Sbjct 1105 GAGCAAATATTGAACACAAGACTGATGAGCGAGGAACTCA-AGGTCTCGGTAGAGGTGAA 1163
Query 312 TAGGGAAAAAACAGGATGGTTTTCAAAGGAGAGCTTGAGATATGCGATCAAGTCTGTGAT 371
|| || |||| ||||||||||| |||||||||||||| |||| ||| |||||||||
Sbjct 1164 AAGAGAGGAAACGGGATGGTTTTCGAAGGAGAGCTTGAGCGGTGCGGTCAGGTCTGTGAT 1223
Query 372 GTATAAAGAGAGTG-GCCTCGGGAAGCTAGT-GAGGAGTAACCACACCAAGTTGAAGGAG 429
| | | ||| || | || ||||||| | | |||||| |||||| |||| |||||||
Sbjct 1224 GGACAGAGATAGCGAGC-TCGGGAAT-TGGGCGAGGAGGAACCACGTAAAGTGGAAGGAG 1281
Query 430 ATTT-TGGTTAGTCCTGGATTATTGA 454
| | || || ||| |||| || |||
Sbjct 1282 -TCTCTGCTTCGTCATGGACTAATGA 1306
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 24062156413
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5