BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg352144
Length=1365
Score E
Sequences producing significant alignments: (Bits) Value
AT4G10740.1 | Symbols: | F-box and associated interaction doma... 990 0.0
AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol ... 920 0.0
AT3G22940.1 | Symbols: | F-box associated ubiquitination effec... 219 8e-56
AT4G33290.1 | Symbols: | F-box and associated interaction doma... 213 4e-54
AT3G22421.1 | Symbols: | F-box and associated interaction doma... 189 6e-47
> AT4G10740.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:6617143-6618426 REVERSE LENGTH=1284
Length=1284
Score = 990 bits (536), Expect = 0.0
Identities = 837/978 (86%), Gaps = 37/978 (4%)
Strand=Plus/Plus
Query 1 ATGACGACGACGATGTCAAATCTTCCAAATG-ATTTGTTAGAAGAGATTGTCTCTAGGGT 59
|||| |||||| ||||||||||||||||| | | | | |||| || ||||||||||||||
Sbjct 1 ATGAGGACGACAATGTCAAATCTTCCAAAGGAACTAG-TAGAGGACATTGTCTCTAGGGT 59
Query 60 TCCTCTAAAATCTATGAGA-AAAGTGAGATTAACATGCAAAAAATGGAATGCTTTGTTCA 118
|||| || | | | ||||| || || ||||||| |||||||| |||||||||||||| |
Sbjct 60 TCCTTTACATTGTTTGAGAGCAA-TGCGATTAACTTGCAAAAACTGGAATGCTTTGTT-A 117
Query 119 -AAAGCCGGAGTTTTACGAAGATGCATATTGGGAAAGAAGAAGAAGCATCAAAGGAATTA 177
|||||| ||| |||| ||||||||| || ||||||||||||||||| ||| |||||||
Sbjct 118 GAAAGCCAGAGCTTTAAGAAGATGCACATACGGAAAGAAGAAGAAGCAGCAAGGGAATTA 177
Query 178 GGAGAGACTCGGATGATCGTGATGATGGATTGCAATGTTTATTTAATGGGCATCATCGTC 237
||||||| ||| ||||| ||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 178 GGAGAGAATCGAATGATTGTGATGATGGATTACAACGTTTATTTAATGGGCATCATCGTC 237
Query 238 AATGAAAATCC-ATCCATAGAGTCTTTAGGTAAACTTACTTGTCTACATGATTC-AGAAC 295
|| ||||| || ||||||| ||||| |||||||||||||||| ||||||| ||| | |||
Sbjct 238 AACGAAAA-CCTATCCATAAAGTCTCTAGGTAAACTTACTTGCCTACATGGTTCTA-AAC 295
Query 296 AAGTCAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTACTATGCATCTTAAAAGTTG 355
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
Sbjct 296 AAGTCAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTATTATGCATCTTAAAAGACG 355
Query 356 ATAATACTAAGATTGTGGTTTGGAATCCGTATCTGGGGCAAACAAGGTGGATCCAAACCG 415
|| |||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 356 ATGATACTAAGATTGTGGTTTTGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAACCA 415
Query 416 GAAAGCATTACCATGCAAGTGGATGGGTAA-CACTAGATGTTTACAATTACGCTCTCGGA 474
||||| || ||| | |||||| ||||| || || ||||||||| || || |||||| ||
Sbjct 416 GAAAGTATCACCGTACAAGTGAATGGG-AAGGACGAGATGTTTATAACTATGCTCTCCGA 474
Query 475 TACGAAAATAATAGTGAAAATCGTAGCCTCAAAATCTTGAGGTTTACAAAAGATTTCCAT 534
||||||| ||| |||| ||| ||||||| ||||||||||||||||| | | |||||||||
Sbjct 475 TACGAAACTAACAGTGGAAACCGTAGCCCCAAAATCTTGAGGTTTATAGATGATTTCCAT 534
Query 535 TATCACTTTCCCGAAAACGTCGCTTTATGGTATGAAATCTATGATTTTGATACTGATTTA 594
| ||| ||||||||| ||||||| | ||||||| ||| ||||||||||||||||||
Sbjct 535 CACCAC---CCCGAAAACCCCGCTTTACGATATGAAACCTACGATTTTGATACTGATTTA 591
Query 595 TGGACTACTCTTGATGTCTCTCCACACTGGCGGATAATATCTAACTGTGGTC-T-TT-CT 651
|||||||||||||||||||||||||||||||||||||||||| ||||||| | || ||
Sbjct 592 TGGACTACTCTTGATGTCTCTCCACACTGGCGGATAATATCTCGCTGTGGTGGTGTTTCT 651
Query 652 CTCAAGGGAAACACTTACTGGGGCGCTGTAGAACGGAATGCATCCGCACAT------CAT 705
|| || ||||||||||| ||||||||||||||||| || ||||| ||| || |||
Sbjct 652 CTTAATGGAAACACTTATTGGGGCGCTGTAGAACGAAACGCATCTGCATATATTGGTCAT 711
Query 706 ATAATTTGTTTTGATTTTACAATAGGGAG-ATTTGGACCGCTTCTACCTCTGCCGTTTAA 764
|| || || ||||||||||||| ||| || ||||||||||||| ||||||||||||||||
Sbjct 712 ATGATCTGCTTTGATTTTACAAGAGG-AGGATTTGGACCGCTTATACCTCTGCCGTTTAA 770
Query 765 GGCGAGGGGTTCAGATTTTGTGCCACTATCTTCGGTTAGAG-ATGAGAAGATCGCAGCTT 823
||| ||||||| || ||||| |||||||||||||| ||||| | ||||||||||| ||||
Sbjct 771 GGCTAGGGGTTTAGTTTTTGCGCCACTATCTTCGGATAGAGCA-GAGAAGATCGCGGCTT 829
Query 824 TATTTCGGGCAAGCGAAAAGGTTGAGATATGGATTACGACTAATATTGATGATGCCAAAA 883
|||||||| ||||| ||||||||| |||||||||||||||||| ||||||| ||| ||
Sbjct 830 TATTTCGGACAAGCAAAAAGGTTGTGATATGGATTACGACTAAGATTGATG---CCACAA 886
Query 884 ATGTGTCCTGGAGCAAGTTTGTT-ACACTAAATATACC-ATACCTTGACCAGAA-TCTTT 940
|||| | |||||||| ||| || ||| || ||||| | | ||||||| | ||| |||||
Sbjct 887 ATGTAACTTGGAGCAA-TTTCTTCACAATATATATATCGA-ACCTTGAGC-GAAATCTTT 943
Query 941 CATATAAGAGTTTCCTCA 958
||| |||||||||| |||
Sbjct 944 CATGTAAGAGTTTCTTCA 961
> AT1G65990.1 | Symbols: | type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein | chr1:24571603-24573471
REVERSE LENGTH=1662
Length=1662
Score = 920 bits (498), Expect = 0.0
Identities = 986/1209 (82%), Gaps = 84/1209 (7%)
Strand=Plus/Plus
Query 3 GACGACGACGATGTCAAATCTTCCAAATGATTTGTTAGAAGAGATTGTCTCTAGGGTTCC 62
|||||||||||||||||||||||||| ||||||||||| || ||| ||||||| |||||
Sbjct 465 GACGACGACGATGTCAAATCTTCCAACGGATTTGTTAGAGGAAATTATCTCTAGAGTTCC 524
Query 63 TCTAAAATCTATGAGAAAAGTGAGATTAACATGCAAAAAATGGAATGCTTTGTTCAAAAG 122
|| |||| ||||||| |||| ||||||| ||||||| ||||| | | ||||||||||
Sbjct 525 TCGGAAATATATGAGAGCAGTGCGATTAACTTGCAAAAGGTGGAACGGTATGTTCAAAAG 584
Query 123 CCGGAGTTTTACGAAGATGCATATTGGGAAAGAAGAAGAAGCATCAAAGGAA-TTAGGAG 181
|| ||| |||||||||||||| ||||| |||||||||| |||| ||| |||| | |||
Sbjct 585 CCAGAGCTTTACGAAGATGCACATTGGCAAAGAAGAAGCAGCAACAAGGGAACTAAGG-C 643
Query 182 AGACTCGGATGATCGTGATGATGGATTGCAATGTTTATTTAATGGGCA-T-CATCGTCAA 239
||||||||||||| ||||||||||||| |||||||||||||||||||| | || |||||
Sbjct 644 AGACTCGGATGATAGTGATGATGGATTACAATGTTTATTTAATGGGCATTGCA--GTCAA 701
Query 240 TGAAAATCCATCCATAGAGTCTTTAGGTAAACTTACTTGTCTACATGATTCAGAACAAGT 299
||||| ||||||||||||| || |||||||||||||||| ||| | ||||||||||| ||
Sbjct 702 TGAAATTCCATCCATAGAGACTCTAGGTAAACTTACTTGCCTAGACGATTCAGAACAGGT 761
Query 300 CAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTACTATGCATCTTAAAAGTTGATAA 359
||||||||||||||||||| ||||||||||||||| |||||||||| |||| |||| |
Sbjct 762 CAAGATATCTCAAGTCTTTTGTTGTGAGGGTTTATTGTTATGCATCTTGAAAGATGATGA 821
Query 360 TACTAAGATTGTGGTTTGGAATCCGTATCTGGGGCAAACAAGGTGGATCCAAACCGGAAA 419
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 822 TACTAAGATTGTGGTTTGGAATCCGTATTTGGGGCAAACAAGGTGGATCCAAAC---AA- 877
Query 420 GCATTACCATGCAAGTGGATGGGTAACACTAGATGTTTACAATTACGCTCTCGGATACGA 479
| ||| || || || || | | |||| | || ||||||||||||||||
Sbjct 878 G-ATTG--ATT----TGC-TGCGTTAG--TGGATGGA-AGAAGTACGCTCTCGGATACGG 926
Query 480 AAATAATAGTGAAAA----TC--GT---AGCCTCAAAATCTTGAGGTTTACAAA-AGATT 529
||||||||||||||| || || |||| ||||||||||||| ||||| | | |||
Sbjct 927 AAATAATAGTGAAAACAGATCTTGTCGTAGCCCCAAAATCTTGAGGGTTACAGATA-ATT 985
Query 530 TCCATTATCACTTTCC-CGAAAACGT-CGCTTTATGGTATGAAATCTATGATTTTGATAC 587
|| | | || |||| ||||||| | | || | |||||||||||||||||||||| |
Sbjct 986 TC-A--A-CATTTTCAGCGAAAACATAC-CTCTCCAGTATGAAATCTATGATTTTGATTC 1040
Query 588 TGATTTATGGACTACTCTTGATGTCTCTCCACACTGGCGGATAATATCT-AACTGTGGTC 646
|||| ||||||||||||||||||| |||||||||||| ||||| ||| ||| |||| |
Sbjct 1041 TGATGTATGGACTACTCTTGATGTGTCTCCACACTGGTTTATAATGTCTGAAC-GTGGCC 1099
Query 647 TTTCTCTCAAGGGAAACACTTACTGGGGCGCTGTAGAACGGAATGCATCCGCA-C-AT-- 702
|||||||||||||||||||||||||||||||| ||||||| | |||| || | | ||
Sbjct 1100 TTTCTCTCAAGGGAAACACTTACTGGGGCGCTAAAGAACGGCACGCATACGGATCCATTG 1159
Query 703 --CATATAATTTGTTTTGATTTTACAATAGGGAGATTTGGACCGCTTCTACCTCTGCCGT 760
|||||||| |||||||||||||||| || ||||||||||||||||||||||||||| |
Sbjct 1160 ATCATATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGACCGCTTCTACCTCTGCCAT 1219
Query 761 TTAAG-GCGAGGGGTTCAGATTTTGTGCCACTATCTTCGGTTAGAGATGAGAAGATCGCA 819
||| | || ||||| || | |||| | ||||||||||||||||||| || || ||| |
Sbjct 1220 TTA-GTGCTTGGGGTGCACAGTTTGCGTCACTATCTTCGGTTAGAGAAGATAAAATCACT 1278
Query 820 GCTTTATTTCGG----GCA-AGCGA-A-AAGGTTGAGATATGGATTACGACTAATATTGA 872
|||||||||| | || ||| | | ||| ||||| |||||||||||||||| |||||
Sbjct 1279 GCTTTATTTCAGAATTGCCGAGC-ATATAAGCTTGAGCTATGGATTACGACTAAGATTGA 1337
Query 873 TGATGCCAAAAATGTGTCCTGGAGCAAGTTTGTT-ACACTAAATATACCATACCTTGACC 931
|| | | || |||| | | |||||||| || || ||| | ||| |||||||||| ||
Sbjct 1338 TG-T-C-AACAATGCGACGTGGAGCAAATTC-TTCACAATGGATACACCATACCTTCACG 1393
Query 932 AGAAT-CTTTCATATAA-GAGTTTCCTCATTGATGAAGAGAAGAAAGTTGTTGTGGTTTT 989
| ||| ||||||| ||| || |||| ||||||| || || || ||| ||||||||||||
Sbjct 1394 A-AATTCTTTCAT-TAAAGACTTTCTTCATTGACGAGGAAAATAAAATTGTTGTGGTTTC 1451
Query 990 TGATAACGAAAGAAA-AGTCACG-C-AC--AAC--AC--CATTATT-A--TCATT---GG 1034
| |||| |||||| | | | | | | || ||| || || |||| | ||||| ||
Sbjct 1452 TAATAAAGAAAGAGACACTAAAGGCGACCTAACGCACGACAGTATTGACATCATTAATGG 1511
Query 1035 AGAGGCTGGATGCTTGAGGAAATTGGAGCTTGGAGAACCCGTAGACAAAAACTGTTGGCC 1094
||||||| |||||||| ||||||||| ||||||| |||| | ||||||||||||||||||
Sbjct 1512 AGAGGCTAGATGCTTGTGGAAATTGGGGCTTGGAAAACCGGCAGACAAAAACTGTTGGCC 1571
Query 1095 ACTTGTGTGCTCGTATGTTCCAAGTATAGTGCAAATCAAGCAACATAATGAAGGGCAAAA 1154
|||||||||| | |||||||||||| |||||||||||||||||||||| | ||| |||||
Sbjct 1572 ACTTGTGTGCCCTTATGTTCCAAGTGTAGTGCAAATCAAGCAACATAAAGGAGG-CAAAA 1630
Query 1155 -GAAA-AAC 1161
|||| |||
Sbjct 1631 CGAAAGAAC 1639
> AT3G22940.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr3:8131468-8132706 FORWARD LENGTH=1239
Length=1239
Score = 219 bits (118), Expect = 8e-56
Identities = 663/909 (73%), Gaps = 106/909 (12%)
Strand=Plus/Plus
Query 286 GATTCAGAACAAGTCAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTACTATGCATC 345
||||||||||||||||||||||||||||| ||||| ||||||||||| || |||| |||
Sbjct 247 GATTCAGAACAAGTCAAGATATCTCAAGTTTTTCACTGTGAGGGTTTGTTGTTATGTATC 306
Query 346 TTAAAAGTTGATAA-TACTAAGA-TTGTGGTTTGGAATCCGTATCTGGGG-CAAACAAGG 402
|| |||| |||||| | || | |||| |||||||| |||||| ||||| |||||||||
Sbjct 307 TTGAAAGATGATAACTT-TA-GTCTTGTTGTTTGGAACCCGTAT-TGGGGACAAACAAGG 363
Query 403 TGGATCCAAACCG-GAAAG--CATTACCA--TGCA--AGTGGATGGGTAACACTAGATGT 455
|||||| ||||| || | | || | | | | || ||||| | | || | | |
Sbjct 364 TGGATC-AAACCCAGAT-GTTCTTT-CGAAATACCCCAG-GGATGTG-A-CA-T-G-T-- 412
Query 456 TTACAATTACGCTCTCGGATACGAAAATAATAGTGAAAATCGTAGCCTCAAAATCTTGAG 515
||| |||||| | |||||||| || || || | || | || ||| ||||||||
Sbjct 413 --ACAGGTACGCTATTGGATACGACAACAAGAG--A----CGCAACCACAAGATCTTGAG 464
Query 516 GTTTACAAA--A-GATTTCCATTATCACTTTCCCGAAAACGTCGCTTTATGGTATGAAAT 572
||||| | | | || |||||||| | || | || ||||| | ||| |||||||||||
Sbjct 465 GTTTATAGATTATGAATTCCATTACC-CT--CGAGACAACGTTGTTTTGTGGTATGAAAT 521
Query 573 CTATGATTTTGA-TACTGATTTATGGACTACTCTTGATGT--CT-CTCCACACTGGCGGA 628
|||||||||||| | ||||||||||||| ||||||||||| || ||||||| ||| ||
Sbjct 522 CTATGATTTTGAGT-CTGATTTATGGACGACTCTTGATGTTACTACTCCACATTGGTTGA 580
Query 629 TAA-TA-TC-TAACTGTGGTCTTTCTCTCAAGGGAAACACTTACTGGGGCGCTGTAGAAC 685
||| | | |||| ||||| || ||||||||||||||||||||||| | ||| | ||
Sbjct 581 TAAATTGTGGTAACCGTGGTGTTACTCTCAAGGGAAACACTTACTGGTGTGCTAAAAAAA 640
Query 686 GGAA-T--G-CATC---CGCA---C--ATCATATAATTTGTTTTGATTTTACAA-TAGGG 732
|||| | | | | | || | |||||||||| ||||||||||| |||| | | |
Sbjct 641 GGAACTCTGACCTTTTTCTCAATGCTGATCATATAATCTGTTTTGATTTCACAAGT-GAG 699
Query 733 AGATTTGGACCGCTTCTACCTCTGCCGTTTAAGGCGAGG-GGTTCAGATTTTGTGCCACT 791
|| ||||| |||||||| | | ||||||||| | || || | | | |||| | ||
Sbjct 700 AGGTTTGGTCCGCTTCTGCTTTTGCCGTTTA-GT-GATTTGGATG-G-TGTTGTTACTCT 755
Query 792 ATCTTCG-GTTAGAGATGAGAAGATCGCAGCTTTA-TTTCGGGCAAGCGAAAAG--GTTG 847
| ||| | |||||||| |||||| | || |||||| ||| | || | | | | ||||
Sbjct 756 AGCTT-GTGTTAGAGAGGAGAAGCTTGCGGCTTTAGTTT-GT-CACGAGGAT-GTTGTTG 811
Query 848 AGATATGGATTACGACTAATATTGATGATGCCAAAAATGTGTCCTGGAGCAAGTTTGTT- 906
|| | |||||||||| ||| ||||| | ||||| | || | ||||||||||| ||
Sbjct 812 AGGTTTGGATTACGATTAAGATTGA-G--GCCAATGAGGTATTGTGGAGCAAGTTC-TTG 867
Query 907 ACACTAAATATACCATACCT-TGACCAGAATCT---TTCA-T-ATA-A-G--AGTTTCCT 956
||| | ||| | || ||| ||| || |||| | | | | | ||||| |
Sbjct 868 ACAGTGAATGTTG-ATTTGGGTGATGAGATTCCGAGTTCACTGACATATGGTAGTTTTTT 926
Query 957 CATTGATGAAGAGAAGAAAGTTGTTGTGGTTTTTGATAACGAAAGAAA-AGTCACGCACA 1015
||| || || ||||||||||||| | || |||||||||| || | || || |
Sbjct 927 CATCGACGAGGAGAAGAAAGTTGCTATGATTTTTGATAA--AACTTTGGA-TCGCGG-CG 982
Query 1016 ACACCA-TT-ATTATCATTGGAGAGGCTGGATGCTTGAGGA-AA-TTGGAGCTTGGAGAA 1071
|||| | || | ||||| ||||||||||||| | | ||| || ||| | || ||||||
Sbjct 983 ACAC-AGTTCAC-ATCATGGGAGAGGCTGGATA-TGGTGGACAAGTTG-ATCTCGGAGAA 1038
Query 1072 CCCGT-AGACAAAA-ACTGTTGGCCACTTGTGTGCTCGTATGTTCCAAGTATAGTGCAAA 1129
|| || | | |||| || |||| |||||||||||||| |||||||| ||| |||||||||
Sbjct 1039 CCGGTTA-ATAAAAGAC-GTTGCCCACTTGTGTGCTCTTATGTTCCGAGTTTAGTGCAAA 1096
Query 1130 TCAAGCAAC 1138
||||| |||
Sbjct 1097 TCAAGAAAC 1105
> AT4G33290.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr4:16049573-16050865 FORWARD LENGTH=1293
Length=1293
Score = 213 bits (115), Expect = 4e-54
Identities = 578/786 (74%), Gaps = 94/786 (12%)
Strand=Plus/Plus
Query 20 ATCTTCCAAATGATTTGTTAGAAGAGATTGTCTCTAGGG-TTCCTCTAAAATCTATGAGA 78
|||||||||| |||||| ||||||| || | || |||| |||| | | ||||||||||
Sbjct 11 ATCTTCCAAAGGATTTGATAGAAGAAATCCTTTCAAGGGTTTCC-ATGACATCTATGAGA 69
Query 79 AAAGTGAGATTAACATGCAAAAAATGGAATGCTTTGTTCAAAAGCCG-GAGTTTTACGAA 137
||| ||||||| ||||||| |||||| |||| | ||| || | ||| |||| |||
Sbjct 70 GTTGTGCGATTAACTTGCAAAAGTTGGAATACTTTATCCAATAG-TGAGAGCTTTAAGAA 128
Query 138 GATGCATATTGGGAAAGAAGAAGAAGCATCAAAGGA-ATTAGGAGAGA-CTCGGATGATC 195
|||||| ||| || | ||| | |||| || || | |||||| | || || |||||
Sbjct 129 GATGCACATT-GG-TA-AAG--TTA-CATC-AACGAGAGAAGGAGA-ATCTAGGGTGATC 180
Query 196 GTGATGATGGATTGCAATGTTTATTTAATG-G-GC-ATCATCGTCAATGA---AAATCCA 249
|| |||| |||| |||| ||| ||| ||| | || || || | |||| |||||
Sbjct 181 ATGTTGATAGATTACAATCTTTTTTTGATGAGCGCTGTCCTCATGGATGACGTTGATCCA 240
Query 250 TCCATAGAGTCTT-TAGGTAAACTTACTTGTC-TACATGATTCAGAACAAGTCAAGATAT 307
|| ||||||| || ||||||||||| ||||| || | | ||||||||||||||||
Sbjct 241 TCTATAGAGT-TTAAAGGTAAACTTAGTTGTCTTA-A-G-----GAACAAGTCAAGATAT 292
Query 308 CTCAAGTCTTTCATTGTGAGGGTTTATTACTATGCATCTTAAAAGTTGATAATACTAAGA 367
||||||||||||| |||||||||||||| |||||||||| |||| |||| ||| ||
Sbjct 293 CTCAAGTCTTTCACTGTGAGGGTTTATTGTTATGCATCTTGAAAGACGATA---CTAGGA 349
Query 368 TTGTGGTTTGGAATCCGTATCTGG--GGCAAACAAGGTGGATCCAAACCG-GAAAG-CAT 423
|||| ||||||||||||||| || || |||||||||||||| | ||| || | | |
Sbjct 350 TTGTTGTTTGGAATCCGTATA-GGCAGG-AAACAAGGTGGATC-ATACCTAGATATTC-T 405
Query 424 TACCATGCA-A-GTGGATGGGTAACACTAGATGTTTACAATTACGCTCTCGGATACGAAA 481
||| | || | || ||| |||| || | | | | | ||||| |||||||| |
Sbjct 406 CACCGTCCATACGTA-ATG---AACAATA--TC---AGA-T-ATGCTCTTGGATACGAGA 454
Query 482 ATAATAG-TGAAAATCGTAGCCTCAAAATCTTGAGGTTTACAAAAGATTTCCATTATCAC 540
|||||| | ||||||||| ||| | |||||||||| | | ||| | | | |||
Sbjct 455 ATAATAAATCTGG-TCGTAGCCTTAAATTATTGAGGTTTATAGATTATTGC--T-A-CAC 509
Query 541 TTTCCCGAAAACGTCGC-TTTAT-GGTATGAAATCTATGATTTTGA-TACTGATTTATGG 597
| ||||| | | | ||| | || |||||||||| |||||||| | |||||||||||
Sbjct 510 ---C--GAAAA-G-CACATTTGTTGGCATGAAATCTACGATTTTGACT-CTGATTTATGG 561
Query 598 ACTACTCTTGATGTCTCTCCACACTGGCGGATAATATCTAACTG-T---G-GTCT----- 647
|| |||||||||||| ||||||| ||| ||| | ||||| || | | |||
Sbjct 562 ACAACTCTTGATGTCACTCCACATTGGTATATATTGTCTAATTGGTCTTGTGTCCAAGGC 621
Query 648 -T-TCTCTCAA-GGGAAACACTTACTGGGGCGCT-GTAGAACGGAA--TGCATCCGC--A 699
| |||||||| ||||| |||||||||| | ||| | |||| | || | || | |
Sbjct 622 GTCTCTCTCAAAGGGAA-CACTTACTGGTGTGCTAG-AGAA-GAAAACT-CAGATGGTTA 677
Query 700 CA-TCATATAATTTGTTTTGATTTTACAATAGGGAGATTTGGACCGCTTCTACCTCTGCC 758
|| ||||||||| |||||||||||||||| || ||||||||| |||||||| ||||| ||
Sbjct 678 CAATCATATAATCTGTTTTGATTTTACAAGAGAGAGATTTGGTCCGCTTCTGCCTCTACC 737
Query 759 GTTTAA 764
| ||||
Sbjct 738 GGTTAA 743
> AT3G22421.1 | Symbols: | F-box and associated interaction domains-containing
protein | chr3:7949116-7950396 REVERSE LENGTH=1281
Length=1281
Score = 189 bits (102), Expect = 6e-47
Identities = 327/428 (76%), Gaps = 46/428 (11%)
Strand=Plus/Plus
Query 1 ATGACGACGACGATGTCAAATCTTCCAAATGATTTGTTAGAAGAGATTGTCTCTAGGGTT 60
||||||||||| || || ||||||||| || || ||||| ||||| ||||||| ||
Sbjct 1 ATGACGACGACAATCTCTCATCTTCCAACGGAGTTATTAGATGAGATAATCTCTAGAGTA 60
Query 61 CC-TCTAAAATCTATGAGAAAAGTGAGATTAACATGCAAAAAAT-GGAATGCTTTGTTCA 118
|| | |||| |||| |||| ||||||||| || |||||||| | ||| | |||| ||||
Sbjct 61 CCAT-TAAAGTCTACGAGAGCAGTGAGATTGACTTGCAAAAACTGGGACT-CTTTATTCA 118
Query 119 AAAGCCGGAGTTTTACGAAGATGCATATTGGGAAAGAAGAAGAAGCATCAAAGGAATTAG 178
||| |||||| | | || | ||||||||||| |||| |||||| | ||
Sbjct 119 AAAACCGGAG-----C-----T--TTA-T--GAAAGAAGAAGCAGCAGCAAAGG-A--AG 160
Query 179 GAGAGACTCGGATGATCGTGATGATGGATTGCAA--TGTTTATTTAATGGGCATCATCGT 236
||||| || ||||||||||| |||||||| || || || | |||| ||||| || |
Sbjct 161 GAGAGTCTAGGATGATCGTGTTGATGGATAAAAACCTG-TT-TGCAATGAGCATCTTCTT 218
Query 237 CAAT-GAA---A-ATCCATCCA--T--AGAGTC-TTTAGGTAAACTTACTTG--TCTAC- 283
|||| ||| | || ||||| | |||| | ||||||||||||||| | |||
Sbjct 219 CAATGGAATTGACATTGATCCATCTGCAGAG-CAAAGAGGTAAACTTACTTGCCTATACG 277
Query 284 ATGATTCAGAACAAGTCAAGATATCTCAAGTCTTTCATTGTGAGGGTTTATTACTATGCA 343
| ||||||||||||||||||||||||||||||||||| || |||||||| |||||||||
Sbjct 278 ACGATTCAGAACAAGTCAAGATATCTCAAGTCTTTCACTGCGAGGGTTTGTTACTATGCG 337
Query 344 TCTTAAAAGTTGATAA-TACTAAGA-TTGTGGTTTGGAATCCGTATCTGGGG-CAAACAA 400
|||| ||| ||||| | || | |||| ||||||||||||||| ||||| |||||||
Sbjct 338 TCTTGGAAGACGATAAGTG-TA-GTCTTGTTGTTTGGAATCCGTAT-TGGGGACAAACAA 394
Query 401 GGTGGATC 408
||||||||
Sbjct 395 GGTGGATC 402
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67218529755
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5