BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg352166
Length=2001
Score E
Sequences producing significant alignments: (Bits) Value
AT4G11030.1 | Symbols: | AMP-dependent synthetase and ligase f... 3134 0.0
AT4G23850.1 | Symbols: LACS4 | AMP-dependent synthetase and lig... 1687 0.0
> AT4G11030.1 | Symbols: | AMP-dependent synthetase and ligase
family protein | chr4:6738120-6742229 FORWARD LENGTH=2001
Length=2001
Score = 3134 bits (1697), Expect = 0.0
Identities = 1902/2003 (95%), Gaps = 6/2003 (0%)
Strand=Plus/Plus
Query 1 ATGACGTCGCAGATAAGATTCAT-TTTCGAGGTGGAGGCGGCTAAGGAAGCCACCGATGG 59
||||||||||||| ||||||||| ||| |||||||| || |||||||||||||| |||||
Sbjct 1 ATGACGTCGCAGAAAAGATTCATCTTT-GAGGTGGAAGCCGCTAAGGAAGCCACAGATGG 59
Query 60 CAATCCCTCGGTTGGTCCTGTGTATCGTAGTACTTTTGC-CAAGGACGGTTTCCCAAATC 118
|||||||||||||||||||| ||||||||||||||||| | || |||| ||||| || |
Sbjct 60 AAATCCCTCGGTTGGTCCTGTCTATCGTAGTACTTTTGCTC-AGAACGGATTCCCGAACC 118
Query 119 CGATTGATGGAATCCAAAGCTGTTGGGATATTTTCCGCACGGCTGTTGAGAAATATCCAA 178
|||| ||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 119 CGATCGATGGTATCCAAAGCTGCTGGGATATTTTCCGCACGGCTGTTGAGAAGTATCCAA 178
Query 179 ACAATCGAATGCTTGGTAGCCGTGAGATTGT-TAACGGGAAGGCAGGAAAGTACGTGTGG 237
||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||
Sbjct 179 ACAATCGAATGCTTGGTCGCCGTGAGATT-TCGAACGGGAAGGCAGGAAAGTACGTGTGG 237
Query 238 AAAACATACAAAGAAGTATATGACATTGTCATAAAACTTGGAAATTCTCTACGTAGTTGT 297
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 238 AAAACATACAAAGAAGTATACGACATTGTCATAAAACTTGGAAATTCTCTACGTAGTTGC 297
Query 298 GGGATTCAGGAGGGAGAAAAATGTGGTATTTATGGTATAAACTGTTGTGAGTGGATCATT 357
|||||| |||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 298 GGGATTAAGGAGGGAGAAAAATGTGGTATATATGGTATAAATTGTTGTGAGTGGATCATT 357
Query 358 AGCATGGAGGCATGTAATGCACATGGCCTATATTGTGTCCCTTTATACGATACATTAGGC 417
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 358 AGCATGGAGGCATGTAATGCACATGGCCTTTATTGTGTCCCTTTATACGATACGTTAGGC 417
Query 418 GCTGGTGCAGTGGAATTCATCATTTCTCATGCAGAGGTTTCAATTGCTTTTGTGGAGGAG 477
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 418 GCTGGTGCAGTGGAATTCATCATTTCTCATGCAGAGGTTTCAATTGCTTTCGTGGAGGAG 477
Query 478 AAGAAGATCCCTGAGCTTTTTAAGACTTGTCCAAACTCAACAAAATATATGAAGACTGTT 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 AAGAAGATCCCTGAGCTTTTTAAGACTTGTCCAAACTCAACAAAATATATGAAGACTGTT 537
Query 538 GTGAGCTTTGGCGGTGTCAAACCCGAACAAAAAGAAGAAGCTGAAAAATTGGGATTGGTA 597
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 538 GTGAGCTTTGGCGGTGTCAAACCGGAACAAAAAGAAGAAGCTGAAAAATTGGGATTGGTA 597
Query 598 ATACATTCTTGGGATGAGTTTTTGAAGCTGGGTGAGGATAAGCAATATGATCTTCCTATT 657
|||||||| |||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct 598 ATACATTCGTGGGATGAGTTTTTGAAGCTGGGTGAGGGTAAGCAATATGAGCTTCCCATT 657
Query 658 AAAAAGCAAAGCGACATATGCACGATTATGTATACTAGTGGAACCACTGGTGACCCTAAG 717
||||||| |||||||||||||||||||||||||||||| ||||| ||||||||||| |||
Sbjct 658 AAAAAGCCAAGCGACATATGCACGATTATGTATACTAGCGGAACAACTGGTGACCCGAAG 717
Query 718 GGAGTTTTGATTTCAAATGAAAGCATTGTTACTATAACTACTGGAGTGATGCATTTCCTA 777
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 GGAGTTATGATTTCAAATGAAAGCATTGTTACTATAACTACTGGAGTGATGCATTTCCTA 777
Query 778 GGGAATGTGAATGCAAGCCTATCCGAGAAGGATGTGTATATTTCTTATCTCCCTCTCGCG 837
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 778 GGGAATGTGAATGCAAGCCTATCTGAGAAGGATGTGTATATTTCTTATCTTCCTCTCGCG 837
Query 838 CATGTCTTTGATCGGGCTATCGAGGAATGTATTATTCAAGTAGGTGGTTCAATTGGTTTC 897
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 CACGTCTTTGATCGGGCAATCGAGGAATGTATTATTCAAGTAGGTGGTTCAATTGGTTTC 897
Query 898 TGGCGCGGGGATGTAAAATTGTTGATTGAAGACCTTGGTGAGTTAAAACCAACTATTTTT 957
|||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| |||
Sbjct 898 TGGCGCGGGGATGTCAAATTGTTGATTGAAGACCTTGGTGAGCTAAAACCAAGTATCTTT 957
Query 958 TGCGCCGTTCCCCGTGTCCTAGATCGAGTATACACAGGACTCCAGCAGAAACTATCTGTT 1017
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 958 TGCGCCGTTCCTCGTGTCCTAGATCGAGTATACACAGGACTACAGCAGAAACTATCTGGT 1017
Query 1018 GGTGGTTTCTTCAAAAAGAAGGTGTTTGATGTTGCTTTTTCCTATAAATTTGGAAATATG 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 GGTGGTTTCTTCAAAAAGAAGGTGTTTGATGTTGCTTTTTCCTATAAATTTGGAAATATG 1077
Query 1078 AAGAAGGGACAGTCTCATGTGGCGGCGGCTCCATTTTGTGACAAACATGTATTCAGCAAG 1137
||||| ||||||||||||||||| || |||||||||||||||||| |||||||| ||||
Sbjct 1078 AAGAAAGGACAGTCTCATGTGGCAGCTTCTCCATTTTGTGACAAACTTGTATTCAACAAG 1137
Query 1138 GTTAAACAAGGACTTGGAGGCAATGTGAGGATTATTCTATCTGGAGCGGCTCCTCTTGCT 1197
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1138 GTTAAACAAGGACTTGGAGGCAATGTGAGGATTATTCTGTCTGGAGCGGCTCCTCTCGCT 1197
Query 1198 AGTCACATAGAGTCATTTCTAAGAGTTGTGGCATGTTGTAATGTTCTACAAGGATATGGT 1257
||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1198 AGTCACATAGAATCTTTTCTAAGAGTTGTTGCATGTTGTAATGTTCTACAAGGATATGGT 1257
Query 1258 CTAACTGAGAGCTGTGCTGGAACTTTTGCAACGTTCCCAGACGAACTAGACATGCTTGGA 1317
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 CTAACTGAGAGTTGTGCTGGAACTTTTGCAACGTTCCCAGACGAACTAGACATGCTTGGG 1317
Query 1318 ACGGTTGGTCCACCCGTGCCAAACGTCGATATACGCCTTGAATCTGTCCCGGAAATGAAT 1377
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 ACTGTTGGTCCACCCGTGCCAAACGTCGATATACGCCTTGAATCTGTCCCGGAAATGAAT 1377
Query 1378 TACGATGCTCTTGGTAGTACTCCGCGTGGCGAAATCTGTATCCGTGGGAAAACTTTGTTT 1437
|| ||||||||||| ||||||||||| |||||||| || || || || |||||||| |||
Sbjct 1378 TATGATGCTCTTGGAAGTACTCCGCGAGGCGAAATATGCATACGAGGAAAAACTTTATTT 1437
Query 1438 TCAGGGTACTACAAACGTGAAGACCTCACAAAAGAGGTTCTTATTGATGGATGGTTGCAC 1497
||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||
Sbjct 1438 TCAGGGTACTACAAACGTGAAGACCTCACAAAAGAGGTTTTTATCGACGGATGGTTGCAC 1497
Query 1498 ACAGGTGATATTGGCGAGTGGCAACCAAATGGAAGCATGAAGATAATTGACCGGAAAAAG 1557
||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 ACAGGTGATGTTGGTGAGTGGCAACCAAATGGAAGCATGAAGATAATTGACCGGAAAAAG 1557
Query 1558 AACATCTTCAAACTCGCGCAAGGAGAGTACGTCGCTGTTGAGAATTTAGAAAATGTCTAC 1617
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1558 AACATCTTCAAACTCGCGCAAGGAGAGTATGTCGCTGTTGAGAATTTAGAAAATGTCTAC 1617
Query 1618 AGTCAAGTAGAAGTTATTGAATCAATATGGGTGTATGGAAACAGCTTTGAATCCTTCCTT 1677
||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||
Sbjct 1618 AGTCAAGTAGAAGTTATTGAATCGATATGGGTATATGGAAACAGCTTTGAGTCCTTCCTT 1677
Query 1678 GTCGCCATCGCTAACCCGGCCCAACAAACTCTTGAGCGATGGGCGGTGGAGAATGGAGTG 1737
||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct 1678 GTCGCAATCGCTAACCCGGCCCAACAAACTCTTGAACGATGGGCTGTGGAGAATGGAGTG 1737
Query 1738 AATGGAGACTTCAACTCCCTCTGCCAAAACGCAAAGGCAAAAGCATTCATACTTGGTGAA 1797
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct 1738 AATGGAGACTTCAACTCCATCTGCCAAAACGCAAAGGCAAAAGCATTCATACTTGGAGAA 1797
Query 1798 CTCGTTAAAATAGCCAAAGAGAAAAAGTTGAAGGGTTTTGAGATCATAAAAGCTATTCAT 1857
|||||||||| |||||||||||| |||||||||||||||||||||||||||| | |||||
Sbjct 1798 CTCGTTAAAACAGCCAAAGAGAACAAGTTGAAGGGTTTTGAGATCATAAAAGATGTTCAT 1857
Query 1858 CTGGAACCAGTGGCTTTCGACATGGAAAGAGACCTTCTTACTCCAACCTACAAAAAGAAG 1917
|||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1858 CTGGAACCAGTGGCGTTCGACATGGAACGAGACCTTCTTACTCCAACCTACAAAAAGAAG 1917
Query 1918 AGGCCTCAATTGCTCAAATACTATCAGAATGTGATAGATGAAATGTACAAGGCAGCAAAG 1977
||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||
Sbjct 1918 AGGCCTCAATTGCTCAAATACTATCAGAATGTGATCCATGAAATGTACAAGACAACAAAG 1977
Query 1978 GAAGGTCAAGCTTCAGGACAGTA 2000
||| ||| |||||| ||||||||
Sbjct 1978 GAAAGTCTAGCTTCCGGACAGTA 2000
> AT4G23850.1 | Symbols: LACS4 | AMP-dependent synthetase and ligase
family protein | chr4:12403454-12408335 REVERSE LENGTH=2339
Length=2339
Score = 1687 bits (913), Expect = 0.0
Identities = 1611/1945 (83%), Gaps = 60/1945 (3%)
Strand=Plus/Plus
Query 54 CGATGGCAA-TCCCTCGGTTGGTCCTGTGTATCGTAGTACT-TTTGCCAAGGACGG-TTT 110
|||||| || || || |||||||| ||||| || |||| | |||||||||||||| |||
Sbjct 126 CGATGG-AAGACCATCAGTTGGTCCAGTGTACCGGAGTA-TCTTTGCCAAGGACGGATTT 183
Query 111 CCCAAATCCGATTGATGGAATCCAAAGCTGTTGGGATATTTTCCGCACGGCTGTTGAGAA 170
||| | ||||| || ||||| | || ||||||||| ||||||||| | ||||||||||
Sbjct 184 CCC-GACCCGATCGAAGGAATGGATAGTTGTTGGGATGTTTTCCGCATGTCTGTTGAGAA 242
Query 171 ATATCCAAACAATCGAATGCTTGGTA-GCCGTGAGATTGTTA-ACGGGAAGGCAGGAAAG 228
||||||||||||| ||||| ||| | |||| ||||||| || | || ||| | || |||
Sbjct 243 GTATCCAAACAATCCAATGC-TGGGACGCCGCGAGATTG-TAGATGGAAAGCCGGGTAAG 300
Query 229 TACGTGTGGAAAACATACAAAGAAGTATATGACATTGTCATAAAACTTGGAAATTCTCTA 288
|| || ||| |||||||| ||||||| || ||||||||||| |||||||||||||||||
Sbjct 301 TATGTCTGGCAAACATACCAAGAAGTCTACGACATTGTCATGAAACTTGGAAATTCTCT- 359
Query 289 C-GTAGTTGTGGGA-TTCAGGAGGGAGAAAAATGTGGTATTTATGGTATAAACTGTTGTG 346
| | || ||| ||| || |||| | || |||||||||||| |||||| ||| | | ||
Sbjct 360 CAGAAG-TGTTGGAGTTAAGGACGAAGCAAAATGTGGTATCTATGGTGCAAATTCTCCTG 418
Query 347 AGTGGATCATTAGCATGGAGGCATGTAATGCACATGGCCTATATTGTGTCCCTTTATACG 406
||||||| || ||||||||||| |||||||||||||| || |||||||| || ||||| |
Sbjct 419 AGTGGATTATCAGCATGGAGGCTTGTAATGCACATGGACTCTATTGTGTACCGTTATATG 478
Query 407 ATACATTAGGCGCTGGTGCAGTGGAATTCATCATTTCTCATGCAGAGGTTTCAATTGCT- 465
||||| |||| |||| ||| ||||||||||||||||| ||| ||||||||||||||| |
Sbjct 479 ATACACTAGGTGCTGATGCTGTGGAATTCATCATTTCCCATTCAGAGGTTTCAATTG-TC 537
Query 466 TTTGTGGAGGAGAAGAAGATCCCTGAGCTT-TTTAAGACTTGTCCAAACTCAACAAAATA 524
|||||||| |||||||||||| ||||| || || ||||| || |||||||| ||| | ||
Sbjct 538 TTTGTGGAAGAGAAGAAGATCTCTGAG-TTGTTCAAGACATGCCCAAACTCGACAGAGTA 596
Query 525 TATGAAGACTGTTGTGAGCTTTGGCGGTGTCAAACCCGAACAAAAAGAAGAAGCTGAAA- 583
||||| |||||||||||||| || |||||| || ||||||||||||||||||||||
Sbjct 597 CATGAAAACTGTTGTGAGCTTCGGGGGTGTCTCACGTGAACAAAAAGAAGAAGCTGAAAC 656
Query 584 AATTGGGATTGGTAATACATTCTTGGGATGAGTTTTTGAAGCTGGGTG-AGGATAAGCAA 642
||||| ||||| ||| || |||||||||| |||||||||||||||| |||| ||||||
Sbjct 657 TTTTGGG-TTGGTTATATATGCTTGGGATGAATTTTTGAAGCTGGGTGAAGGA-AAGCAA 714
Query 643 TATGATCTTCCTATTAAAAAGCAAAGCGACATATGCACGATTATGTATACTAGTGGAACC 702
|||||||| || || |||||| |||||||||| ||||||||||||||||| |||||||||
Sbjct 715 TATGATCTCCCAATCAAAAAGAAAAGCGACATTTGCACGATTATGTATACGAGTGGAACC 774
Query 703 ACTGGTGACCCTAAGGGAGTTTTGATTTCAAATGAAAGCATTGTTACTATAACT-ACTGG 761
||||||||||| |||||||| |||| || || ||||||||||| ||| ||| | ||||
Sbjct 775 ACTGGTGACCCAAAGGGAGTGATGATATCTAACGAAAGCATTGTGACTCTAA-TCGCTGG 833
Query 762 AGTGATGCATTTCCTAGGGAATGTG--AATGCAAGC-CT-ATCCGAGAAGGATGTGTATA 817
|||||| | | | || | || ||| || | | || || | | | ||| |||||||||
Sbjct 834 AGTGATCCGTCTACT--GAAAAGTGCTAACG-AGGCTCTGA-CTGTGAAAGATGTGTATC 889
Query 818 TTTCTTATCTCCCTCTCGCGCATGTCTTTGATCGGGCTATCGAGGAATGTATT-ATTCAA 876
|||||||||| ||||| || || ||||||| || | ||||||||| ||| || ||||||
Sbjct 890 TTTCTTATCTTCCTCTTGCCCACATCTTTGACCGAGTTATCGAGGAGTGT-TTCATTCAA 948
Query 877 GTA-GGTGGTTCAATTGGTTTCTGGCGCGGGGATGTAAAATTGTTGATTGAAGACCTTGG 935
| |||| | ||||||| |||||||| |||||||||||||||||||| ||||||||||
Sbjct 949 -CATGGTGCTGCAATTGGCTTCTGGCGAGGGGATGTAAAATTGTTGATCGAAGACCTTGC 1007
Query 936 TGAG-TTAAAACCAACTATTTTTTGCGCCGTTCCCCGTGTCCTAGATCGAGTATACACAG 994
|||| || ||||||||||||||||| || || || |||||||| ||| |||||||| |||
Sbjct 1008 TGAGCTT-AAACCAACTATTTTTTGTGCTGTACCTCGTGTCCTGGATAGAGTATACTCAG 1066
Query 995 GACTCCAGCAGAAACTATCTGTTGGTGGTTTCTTCAAAAAGAAGGTGTTTGATGT-TGCT 1053
| || ||| |||| || |||| |||||| ||||| |||||| | |||||| | |||
Sbjct 1067 GTCTTCAGAAGAAGCTTTCTGATGGTGGATTCTTAAAAAAGTTCATATTTGAT-TCTGCA 1125
Query 1054 TTTTCCTATAAATTTGGAAATATGAAGAAGGGACAGTCTCATGTGGCGGCGGCTCCA-TT 1112
||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| ||
Sbjct 1126 TTTTCCTATAAATTTGGTTATATGAAGAAGGGACAGTCTCATGTGGAGGCCTCTCCACTT 1185
Query 1113 TTGTGACAAACATGTATTCAGCAAGGTTAAACAAGGACTTGGAGGCAATGTGAGGATTAT 1172
|| |||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1186 TT-TGACAAACTTGTGTTCAGCAAGGTTAAACAAGGACTCGGAGGCAATGTGAGGATTAT 1244
Query 1173 TCTATCTGGAGCGGCTCCTCTTGCTAGTCACATAGAGTCATTTCTAAGAGTTGTGGCATG 1232
|||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 1245 TCTATCTGGAGCTGCTCCTCTTGCTAGTCACGTAGAGTCATTTCTAAGAGTGGTGGCATG 1304
Query 1233 TTGTAATGTTCTACAAGGATATGGTCTAACTGAGAGCTGTGCTGGAACTTTTG-CAACGT 1291
||| ||||||| |||||||| ||||| ||||| ||||||||||||||||||| | ||
Sbjct 1305 CTGTCATGTTCTCCAAGGATACGGTCTTACTGAAAGCTGTGCTGGAACTTTTGTCT-CGC 1363
Query 1292 TCCCAGACGAACTAGACATGCTTGGAACGGTTGGTCCACCCGTGCCAAACGTCGATATAC 1351
| ||||| ||||||| ||||| || || ||||||||||| ||||||||||| |||||||
Sbjct 1364 TGCCAGATGAACTAGGTATGCTCGGCACAGTTGGTCCACCAGTGCCAAACGTTGATATAC 1423
Query 1352 GCCTTGAATCTGTCCCGGAAATG-AATTACGATGCTCTTG-GTAGTACTCCGCGTGGCGA 1409
|||||||||| ||||| || ||| ||| | |||||||||| | |||||| | ||||| ||
Sbjct 1424 GCCTTGAATCCGTCCCCGAGATGGAAT-ATGATGCTCTTGCG-AGTACTGCACGTGGTGA 1481
Query 1410 AATCTGTATCCGTGGGAAA-ACTTTGTTT-TCAGGGTACTACAAACGTGAAGACCTCACA 1467
|||||| || || |||||| || | ||| || || ||||||||||||||||| |||||
Sbjct 1482 AATCTGCATTCG-GGGAAAGACCCT-TTTCTCTGGTTACTACAAACGTGAAGATCTCACG 1539
Query 1468 AAAGAGGTTCTTATTGATGGATGGTTGCACACAGGTGATATTGGCGAGTGGCAACCAAAT 1527
||||||||||| |||||||||||| |||||||||||||| |||| |||||||||||| ||
Sbjct 1540 AAAGAGGTTCTCATTGATGGATGGCTGCACACAGGTGATGTTGGTGAGTGGCAACCAGAT 1599
Query 1528 GGAAGCATGAAGATAATTGACCGGAAAAAGAACATCTTCAAACTCGCGCAAGGAGAGTAC 1587
||||||||||||||||||||| |||| ||||| ||||| |||||| | |||||||||||
Sbjct 1600 GGAAGCATGAAGATAATTGACAGGAAGAAGAATATCTTTAAACTCTCACAAGGAGAGTAT 1659
Query 1588 GTCGCTGTTGAGAATTTAGAAAATGTCTACAGTCAAGTAGAAGTTATTGAATCAATATGG 1647
|| || || ||||| ||||||| | ||| || ||||| ||| | |||| || | |||
Sbjct 1660 GTTGCGGTGGAGAACATAGAAAACATATACGGTGAAGTACAAGCTGTTGATTCCGTGTGG 1719
Query 1648 GTGTATGGAAACAGCTTTGAATCCTTCCTTGTCGCCATCGCTAACCCGGCCCAACAAACT 1707
||||| || ||||||||||| |||||||| | || ||||| ||||| ||| || | |
Sbjct 1720 GTGTACGGTAACAGCTTTGAGTCCTTCCTAATAGCTATCGCCAACCCAAACCAGCATA-T 1778
Query 1708 C-TTGAGCGATGGGCGGTGGAGAATGGAGTGAATGGAGACT-TCAACTCCCTCTGCCAAA 1765
| |||| || ||||| | || || || |||| ||| |||| | | | | ||||| ||||
Sbjct 1779 CCTTGAACGCTGGGCTGCAGAAAACGGTGTGAGTGGTGACTATGA-CGCTCTCTGTCAAA 1837
Query 1766 ACGCAAAGGCAAAAGCATTCATACTTGGTGAACTCGTTAAAATAGCCAAAGAGAAAAAGT 1825
| | ||||||||| | |||||| || || ||||| |||||||| |||||||||||||||
Sbjct 1838 ATGAAAAGGCAAAGGAATTCATTCTCGGAGAACTTGTTAAAATGGCCAAAGAGAAAAAGA 1897
Query 1826 TGAA-GGGTTTTGAGATCATAAAAGCTATTCATCTGGAACCAGTGGC-TTTCGACATGGA 1883
|||| ||||| |||||||| || || |||||||| || |||||| | ||| ||||||||
Sbjct 1898 TGAAAGGGTTC-GAGATCATCAAGGCGATTCATCTTGACCCAGTGCCATTT-GACATGGA 1955
Query 1884 AAGAGACCTTCTTACTCCAACCTACAAAAAGAAGAGGCCTCAATTGCTCAAATACTATCA 1943
| |||| |||||||| || |||| ||||||||| |||||||| ||||| |||||||| ||
Sbjct 1956 ACGAGATCTTCTTACGCCGACCTTCAAAAAGAAAAGGCCTCAGTTGCTGAAATACTACCA 2015
Query 1944 GAATGTGATAGATGAAATGTACAAG 1968
|| |||||| || ||||||||||||
Sbjct 2016 GAGTGTGATCGACGAAATGTACAAG 2040
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99146076375
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5