BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg352314
Length=1962
Score E
Sequences producing significant alignments: (Bits) Value
AT4G12290.1 | Symbols: | Copper amine oxidase family protein |... 1821 0.0
AT4G12280.1 | Symbols: | copper amine oxidase family protein |... 1413 0.0
AT4G12270.1 | Symbols: | Copper amine oxidase family protein |... 1164 0.0
> AT4G12290.1 | Symbols: | Copper amine oxidase family protein
| chr4:7304405-7307138 FORWARD LENGTH=2420
Length=2420
Score = 1821 bits (986), Expect = 0.0
Identities = 1663/1987 (84%), Gaps = 57/1987 (3%)
Strand=Plus/Plus
Query 3 GGAGCTCAACAAAGTCCGATCAATCCTCTCCTCTCACGCGCTCTTCACCTCAC-GTGCAC 61
|||| | |||||| |||||||||| ||||| ||||||||||| ||||| || | || |||
Sbjct 299 GGAGATTAACAAAATCCGATCAATACTCTCTTCTCACGCGCTATTCACTTC-CGGTACAC 357
Query 62 CACTCACGCTTAACTCCGTCGTCCTTGAAGAGCCAGACAAGAACCTAGTCCGACAATGGG 121
||| | |||| || ||||||| ||||||||||| || ||||| || ||||| || ||||
Sbjct 358 CACACGCGCTCCACACCGTCGTTCTTGAAGAGCCTGAGAAGAATCTTGTCCGTCACTGGG 417
Query 122 ACAAA-GGAGACCAACTCCCAAC-AAGAAAGGCTTCTGTGATCGCACGT-TTAGGAG-GT 177
| ||| ||| ||| ||| || | | |||| ||||| || ||||||||| || || | |
Sbjct 418 AAAAAGGGA-ACCCACTTCCTCCGAGGAAA-GCTTCCGTCATCGCACGTGTT-GGCGCG- 473
Query 178 GATTCACACGTGCTTACCGTTGACT-TATCTACAAATCTTGTTGATTTAGTGGATAGTCC 236
|| | |||||||| |||||||| | | ||||| || || |||| || | |||| ||
Sbjct 474 GACACGCACGTGCTCACCGTTGA-TATCTCTACGGGTCGGGTAGATTCAGAGAATAGCCC 532
Query 237 GGTTCCTAAATCCGGTTACCCGATTG-TGACGT-CGGAGGAGATGGACAG-CGCCGCGAG 293
||||| | || |||||||||| || |||| | || |||||| || | | | |
Sbjct 533 GGTTCGTGTTTCTGGTTACCCGA-TGATGAC-TATAGAAGAGATGAAC-GATATCAC-TG 588
Query 294 -TGCACCATTCTCAAACGCAGATTTCAACCGTACGATTC-TTTCTCGTGGAATAAATCTA 351
|| |||||| |||||||| |||||||||||||||| || | ||||||||| | ||||||
Sbjct 589 TTGTACCATTTTCAAACGCGGATTTCAACCGTACGA-TCATCTCTCGTGGAGTTAATCTA 647
Query 352 ACGGACGTGGTTTGTATCCCAATGTCTAGTGGCTGGTTTGGTAATAAAGAAGACAACAAA 411
||||||||| ||||| ||||||| ||| |||| |||||||||||||||||||| |||
Sbjct 648 ACGGACGTGATTTGTTTCCCAATCTCTTGTGGTTGGTTTGGTAATAAAGAAGAAAACGCG 707
Query 412 AGGGTGACTAAAA-TCCAGTGTTTC-TCATCTCAAGGTACTCCTAATTTCTACATGCGAC 469
||||| | ||||| | ||||||||| | | | ||||| || ||||| ||||||||||| |
Sbjct 708 AGGGTAATTAAAAGT-CAGTGTTTCATGA-CACAAGGAACACCTAACTTCTACATGCGTC 765
Query 470 CTATCGAAGGTTTGACTC-TACTTTTTGATTTAGATACGAAGCAAAT-ACTTGAGATAAC 527
||||||||||||| || | | || | ||||||||||| |||||| | | | ||||||||
Sbjct 766 CTATCGAAGGTTTAAC-CATTCTCATCGATTTAGATACAAAGCAAGTGA-TCGAGATAAC 823
Query 528 CGATACCGGTCAATCAATACCCATACCCGGTTCAACCAATACCGATTATCGATACTCC-A 586
|||||| |||| | |||||||||||||||||||||||||||||||| || | ||| |
Sbjct 824 CGATACAGGTCGGGCTATACCCATACCCGGTTCAACCAATACCGATTACCGCT--TCCAA 881
Query 587 ATTTTCCG-AGCCA-GGACAAAAC-CAGACCTCTCAATCCAATCTCCATCGAGCAGCCAC 643
| | || | ||| |||||||| | | ||||| || || || ||||| ||||||||||
Sbjct 882 AAGCT-CGCAACCACCGACAAAACTC-GGCCTCTAAACCCGATATCCATTGAGCAGCCAC 939
Query 644 ATGGTCCAAGCTTTGTAATCGAGGATAACCATATAGTAAAATGGGCAAATTGGGAATTTC 703
|||||||||||| || || ||||| |||||| |||| ||||||||||||||||||||||
Sbjct 940 GTGGTCCAAGCTTCGTGATAGAGGACAACCATCTAGTGAAATGGGCAAATTGGGAATTTC 999
Query 704 ACT-TAAAACCGGACCCGAGAGCCGGTCTGATTATATCCCGGGTCAGAGTACATGATCCG 762
| | ||||||| ||||||||||| ||| || | ||||| ||||| |||||||| || |||
Sbjct 1000 A-TCTAAAACCTGACCCGAGAGCAGGTGTGGTAATATCACGGGTAAGAGTACACGACCCG 1058
Query 763 GATACTGAAGAGACACGTGAAGTGATGTACAAAGGTTTCGTGTCGGAGCTTTTTATTCCA 822
|||||| | ||||||||||| ||||||||||||||||||||||| || |||||| ||||
Sbjct 1059 GATACTCATGAGACACGTGACGTGATGTACAAAGGTTTCGTGTCTGAACTTTTTGTTCCG 1118
Query 823 TACATGGATCCATCGGAAGCTTGGTACTTCAAGACTTACATGGACGCAGGAGAGTACGGG 882
||||||||||||||||| || |||||||| |||||||||||||||||||| || ||||||
Sbjct 1119 TACATGGATCCATCGGACGCGTGGTACTTTAAGACTTACATGGACGCAGGGGAATACGGG 1178
Query 883 TTGGGGTTACAAACCATGTCGCTCG-AGCCGCTTAACGATTGTCCAAGAAACGCCGTTTA 941
|| ||||||||| ||||| | |||| | |||||||| ||||||||| ||||||| | ||
Sbjct 1179 TTCGGGTTACAAGCCATGCCACTCGTA-CCGCTTAATGATTGTCCACGAAACGCAGCCTA 1237
Query 942 TATGGACGGAATATTCGCTGCGGCTGACGGAACGCCGTTTGTGAGAGAGAATATGATTTG 1001
|||||||||| | ||||| || || || ||||| ||||| |||||||| || ||| ||||
Sbjct 1238 TATGGACGGAGTTTTCGCCGCAGCCGATGGAACACCGTTCGTGAGAGAAAACATGGTTTG 1297
Query 1002 TGTGTTTGAGAGTTACGCCGGAGATATTGCGTGGCGTCACACCGAGTA-TCCCGTCCCCG 1060
| | ||||||||||||||||||||||||| |||||||||| |||| | ||| || |||
Sbjct 1298 TATCTTTGAGAGTTACGCCGGAGATATTGGGTGGCGTCACTCCGA-AAGCCCCATCACCG 1356
Query 1061 GCATGCCGCCGTTACGGGAAGTGAGACCAAAGGTGACGCTTGTGGTACGAATGGTAGCCT 1120
| || ||| || |||||||||||||||| |||||||| ||||||||||||| ||| |
Sbjct 1357 GTAT---ACCGATAAGGGAAGTGAGACCAAAAGTGACGCTAGTGGTACGAATGGCAGCTT 1413
Query 1121 CAGTGGGTAACTACGATTTCATCATTGATTATGAGTTCCAAACTGATGGGCTTATGAGAG 1180
| || |||||||| |||| |||||||||||| ||||||||||||||||||||||| | ||
Sbjct 1414 CGGTAGGTAACTATGATTACATCATTGATTACGAGTTCCAAACTGATGGGCTTATAAAAG 1473
Query 1181 CAAAGGTTGGGCTTAGTGGAAT-CTTGATGGTAAAAGGGACATCGTA-CGAGAACAAGAA 1238
| ||||| ||||| |||||||| | | ||||| ||||||||| | || | | ||||| ||
Sbjct 1474 CTAAGGTCGGGCTAAGTGGAATAC-TAATGGTGAAAGGGACAACATATC-AAAACAAAAA 1531
Query 1239 CCAAGTGAAGAAAGACAAAGAAGGTAATGAAGAAGAGCTTTATGGCACAATTCTGTCTGA 1298
||||||| ||||||| ||||| |||||||||||||||||| | ||||| ||||||||||
Sbjct 1532 CCAAGTGGAGAAAGATAAAGACGGTAATGAAGAAGAGCTTCACGGCACGCTTCTGTCTGA 1591
Query 1299 AAATGTAATTGGAGTTATTCACGACCACTACGTCACTTTTTACTTTGACCTCGACGTTGA 1358
||||||||||||||| || ||||| |||||||||||||||||| ||||||| ||||| ||
Sbjct 1592 AAATGTAATTGGAGTAATACACGATCACTACGTCACTTTTTACCTTGACCTTGACGTCGA 1651
Query 1359 TGGCCCGGAAAATTCCTTTGTTAAAGTGAACCTTAAGAGGCAAGAGACGGCGCTAGGTGA 1418
||||||||| || || |||||||||||||| || |||||||||||||| | || ||| ||
Sbjct 1652 TGGCCCGGACAACTCATTTGTTAAAGTGAATCTCAAGAGGCAAGAGACCGAGCCAGGCGA 1711
Query 1419 ATCACCTAGGAAGAGTTACATGAAAGCGGTTAGGAACATTGTGAAAACCGAAAAGGACGG 1478
||||| ||||| |||||| | ||||| ||||||||||||| ||||||||||||||| ||
Sbjct 1712 GTCACCGAGGAAAAGTTACCTAAAAGCTGTTAGGAACATTGCGAAAACCGAAAAGGATGG 1771
Query 1479 TAAGATCAAGCTTAGCTTGTACGATCCATCAGAATACCACGTCATTAATC-CTAGTAAAA 1537
| ||||||||||||||||||||||||||||||||| ||||||||| || | || ||||||
Sbjct 1772 TCAGATCAAGCTTAGCTTGTACGATCCATCAGAATTCCACGTCATCAA-CTCTGGTAAAA 1830
Query 1538 CCACTCGGGTTGGTAACCCGAGGGGTTACAAGATTGTGCCTAGAGCCACAGCAGCAAGTC 1597
|||||||||| || ||||||| |||||| ||| | || |||||| | || ||||| ||||
Sbjct 1831 CCACTCGGGTCGGAAACCCGACGGGTTATAAGGTCGTTCCTAGAACGACGGCAGCTAGTC 1890
Query 1598 TGCTTGACCATGATGATCCACCACAGAAGAGAGGAGCTTTTACTAATAACCAAATTTGGG 1657
| ||||||||||||||||| || |||||||||||||||||||| || |||||||||||||
Sbjct 1891 TACTTGACCATGATGATCCGCCGCAGAAGAGAGGAGCTTTTACCAACAACCAAATTTGGG 1950
Query 1658 TTACTCCATACAATAAGTCCGAGCAATGGGCTGGTGGTTTGTTCACTTACCAAAGCCACG 1717
| ||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| |
Sbjct 1951 TCACTCCGTACAATAAGTCGGAGCAATGGGCTGGTGGCTTGTTCACTTACCAAAGCCATG 2010
Query 1718 GTGATGATACTCTTGCGGTTTGGTCCGACAGGGATAGAGATATAGAGAATAACGACATTG 1777
||||||| |||||||| |||||||| |||||||||||||| |||||||| || || || |
Sbjct 2011 GTGATGACACTCTTGCAGTTTGGTCAGACAGGGATAGAGACATAGAGAACAAGGATATAG 2070
Query 1778 TGGTGTGGTACACGCTCGGGTTCCATCACATTCCATGTCAAGAAGATTTTCCGATAATGC 1837
| |||||||| || || || ||||||||||||||||||||||||||||||||||||||||
Sbjct 2071 TTGTGTGGTATACACTTGGTTTCCATCACATTCCATGTCAAGAAGATTTTCCGATAATGC 2130
Query 1838 CCACGGTTTCTTCAAGTTTTGATTTGAAGCCCGCAAATTTTTTCGAGCGCAGTCCAATTC 1897
||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| |||||| |
Sbjct 2131 CCACGGTTTCTTCGAGTTTCGATTTGAAGCCCGTAAACTTTTTCGAGCGCAATCCAATCC 2190
Query 1898 TTAAG-GCCGCTCCAAACTTTGAATATGACCTTCCGGTTTGCGGAGC-CAAATCTGTTTC 1955
| | | |||||||||||||||||| |||| || |||||||| |||| ||| ||||||||
Sbjct 2191 TCA-GTGCCGCTCCAAACTTTGAACATGATCTCCCGGTTTGTGGAGTTCAA-TCTGTTTC 2248
Query 1956 TGCTTGA 1962
|||||||
Sbjct 2249 TGCTTGA 2255
> AT4G12280.1 | Symbols: | copper amine oxidase family protein
| chr4:7301769-7302994 FORWARD LENGTH=903
Length=903
Score = 1413 bits (765), Expect = 0.0
Identities = 851/894 (95%), Gaps = 0/894 (0%)
Strand=Plus/Plus
Query 1069 CCGTTACGGGAAGTGAGACCAAAGGTGACGCTTGTGGTACGAATGGTAGCCTCAGTGGGT 1128
|||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 10 CCGTTAAGGGAAGTGAGACCAAAGGTGACACTTGTGGTACGAATGGTAGCTTCAGTGGGT 69
Query 1129 AACTACGATTTCATCATTGATTATGAGTTCCAAACTGATGGGCTTATGAGAGCAAAGGTT 1188
|||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 70 AACTACGATTACATCATTGATTATGAGTTCCAAACTGATGGGGTTATGAGAGCAAAGGTT 129
Query 1189 GGGCTTAGTGGAATCTTGATGGTAAAAGGGACATCGTACGAGAACAAGAACCAAGTGAAG 1248
|||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 130 GGGCTTAGTGGAATGTTGATGGTGAAAGGGACAACGTACGAGAACAAGAACCAAGTGAAG 189
Query 1249 AAAGACAAAGAAGGTAATGAAGAAGAGCTTTATGGCACAATTCTGTCTGAAAATGTAATT 1308
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 190 AAAGACAAAGAAGGTAATGAAGAAGAGCTTTATGGCACGATTCTGTCCGAAAATGTAATT 249
Query 1309 GGAGTTATTCACGACCACTACGTCACTTTTTACTTTGACCTCGACGTTGATGGCCCGGAA 1368
||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||
Sbjct 250 GGAGTTATTCACGACCACTACGTCACTTTTTACCTTGACCTCGATGTCGATGGCCCGGAC 309
Query 1369 AATTCCTTTGTTAAAGTGAACCTTAAGAGGCAAGAGACGGCGCTAGGTGAATCACCTAGG 1428
||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||
Sbjct 310 AATTCCTTTGTTAAAGTGAACCTCAAGAGGCAAGAGACGGCGCCAGGTGAGTCACCTAGG 369
Query 1429 AAGAGTTACATGAAAGCGGTTAGGAACATTGTGAAAACCGAAAAGGACGGTAAGATCAAG 1488
|| |||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||
Sbjct 370 AAAAGTTACATGAAAGCAGTTAGGAACATTGTGAAAACCGAAAAAGACGGTCAGATCAAG 429
Query 1489 CTTAGCTTGTACGATCCATCAGAATACCACGTCATTAATCCTAGTAAAACCACTCGGGTT 1548
|||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||
Sbjct 430 CTTAGCTTGTACGATCCATCAGAATACCACGTCATTAATCCTGGTAAAACAACTCGAGTT 489
Query 1549 GGTAACCCGAGGGGTTACAAGATTGTGCCTAGAGCCACAGCAGCAAGTCTGCTTGACCAT 1608
|||||||||| |||||||||| |||| ||||||||||||||||| ||||| |||||||||
Sbjct 490 GGTAACCCGACGGGTTACAAGGTTGTCCCTAGAGCCACAGCAGCTAGTCTACTTGACCAT 549
Query 1609 GATGATCCACCACAGAAGAGAGGAGCTTTTACTAATAACCAAATTTGGGTTACTCCATAC 1668
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 550 GATGATCCACCGCAGAAGAGAGGAGCTTTTACTAATAACCAAATTTGGGTTACTCCCTAC 609
Query 1669 AATAAGTCCGAGCAATGGGCTGGTGGTTTGTTCACTTACCAAAGCCACGGTGATGATACT 1728
||||||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||
Sbjct 610 AATAAGTCCGAGCAATGGGCTAGTGGTTTATTCACTTACCAAAGCCATGGTGATGATACT 669
Query 1729 CTTGCGGTTTGGTCCGACAGGGATAGAGATATAGAGAATAACGACATTGTGGTGTGGTAC 1788
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 670 CTTGCGGTTTGGTCCGACAGAGATAGAGATATAGAGAATAAGGACATTGTGGTGTGGTAC 729
Query 1789 ACGCTCGGGTTCCATCACATTCCATGTCAAGAAGATTTTCCGATAATGCCCACGGTTTCT 1848
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 730 ACGCTTGGGTTCCATCACATTCCATGTCAAGAAGATTTTCCGATAATGCCCACTGTTTCT 789
Query 1849 TCAAGTTTTGATTTGAAGCCCGCAAATTTTTTCGAGCGCAGTCCAATTCTTAAGGCCGCT 1908
|||||||| ||||||||||||| ||||||||||||||||| |||||| ||||||||||||
Sbjct 790 TCAAGTTTCGATTTGAAGCCCGTAAATTTTTTCGAGCGCAATCCAATCCTTAAGGCCGCT 849
Query 1909 CCAAACTTTGAATATGACCTTCCGGTTTGCGGAGCCAAATCTGTTTCTGCTTGA 1962
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 850 CCAAACTTTGAATATGACCTTCCGGTTTGCGGAGCCAAATCTGATTCTGCTTGA 903
> AT4G12270.1 | Symbols: | Copper amine oxidase family protein
| chr4:7297808-7299930 FORWARD LENGTH=1383
Length=1383
Score = 1164 bits (630), Expect = 0.0
Identities = 825/919 (90%), Gaps = 13/919 (1%)
Strand=Plus/Plus
Query 1 ATGGAGCTCAACAAAGTCCGATCAATCCTCTCCTCTCACGCGCTCTTCACCTCACGTGCA 60
|||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||| |
Sbjct 274 ATGGAGATCAACAAAGTCCGATCAATCCTCTCCTCCCACGCGCTCTTCGCCTCACGTGTA 333
Query 61 CCACTCAC--GCTTAACTCCGTCGTCCTTGAAGAGCCAGACAAGAACCTAGTCCGACAAT 118
|| | ||| ||||||||||||||| |||||||||||||||||||| |||||| ||||||
Sbjct 334 CC-C-CACTTGCTTAACTCCGTCGTTCTTGAAGAGCCAGACAAGAATCTAGTCAGACAAT 391
Query 119 GGGACAAAGGAGACCAACTCCCAACAAGAAAGGCTTCTGTGATCGCACGT-TTAGGAGGT 177
|||| |||||||||||||| ||| |||||||||| || |||||||||||| || || ||
Sbjct 392 GGGAGAAAGGAGACCAACTACCACCAAGAAAGGCCTCAGTGATCGCACGTGTT-GGCGGC 450
Query 178 GATTCACACGTGCTTACCGTTGACTTATCTACAAATCTTGTTGATTTAGTGGATAGTCCG 237
| || ||| |||| | ||||||||||||||||| || ||||||| || ||||||||||
Sbjct 451 AACTCGCACTTGCTCATCGTTGACTTATCTACAAGTCGTGTTGATCAAGCGGATAGTCCG 510
Query 238 GTTCCTAAATCCGGTTACCCGATTGTGACGTCGGAGGAGATGGACAGCGCCGCGAGTGCA 297
|||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 511 GTTCCTGAATCCGGTTACCCGATTGTGACGTCGGAGGAGATGGACAGTGCCGCGTCTGCA 570
Query 298 CCATTCTCAAACGCAGATTTCAACCGTACGATTC-TTTCTCGTGGAATAAATCTAACGGA 356
|| |||||||||||||||||||||||||||| || ||||||||| | |||||||||||
Sbjct 571 CCGTTCTCAAACGCAGATTTCAACCGTACGA-TCAACTCTCGTGGAGTTAATCTAACGGA 629
Query 357 CGTGGTTTGTATCCCAATGTCTAGTGGCTGGTTTGGTAATAAAGAAGAC-A-A-CAAAAG 413
|||| ||||||||||||| |||||||||||||||||||||||||| ||| | | ||||||
Sbjct 630 CGTGATTTGTATCCCAATCTCTAGTGGCTGGTTTGGTAATAAAGACGACAACACCAAAAG 689
Query 414 GGTGACTAAAATCCAGTGTTTCTCATCTCAAGGTACTCCTAATTTCTACATGCGACCTAT 473
||| |||||||| |||||||||||| |||||| ||| |||||||||||||||||||||||
Sbjct 690 GGTTACTAAAATTCAGTGTTTCTCAACTCAAGATACCCCTAATTTCTACATGCGACCTAT 749
Query 474 CGAAGGTTTGACTCTACTTTTTGATTTAGATACGAAGCAAATACTTGAGATAACCGATAC 533
||||||||||||||| |||||||||||||| ||||||| ||||||||||||||| |||||
Sbjct 750 CGAAGGTTTGACTCTGCTTTTTGATTTAGACACGAAGCGAATACTTGAGATAACAGATAC 809
Query 534 CGGTCAATCAATACCCATACCCGGTTCAACCAATACCGATTATCGATACTCCAATTTTCC 593
|||||||||||||||||||||||||||||| ||||||||||||||||| || | | ||||
Sbjct 810 CGGTCAATCAATACCCATACCCGGTTCAACTAATACCGATTATCGATATTCTACTCTTCC 869
Query 594 GAGCCAGGACAAAACCAGACCTCTCAATCCAATCTCCA-TCGAGCAGCCACATGGTCCAA 652
| ||| |||||||||||||| |||||| |||| | || |||||||||||| ||| ||||
Sbjct 870 AAACCATGACAAAACCAGACCCCTCAATACAATAT-CACTCGAGCAGCCACGTGGACCAA 928
Query 653 GCTTTGTAATCGAGGATAACCATATAGTAAAATGGGCAAATTGGGAATTTCACTTAAAAC 712
|||| || ||||| ||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct 929 GCTTCGTTATCGAAGATAACCATTTAGTAAAATGGGCAAATTGGGAATTTCATTTAAAAC 988
Query 713 CGGACCCGAGAGCCGGTCTGATTATATCCCGGGTCAGAGTACATGATCCGGATACTGAAG 772
| ||||||||||||||||||||||| |||| ||||| | |||| || |||||||| |||
Sbjct 989 CAGACCCGAGAGCCGGTCTGATTATGTCCCAGGTCAAAATACACGACCCGGATACACAAG 1048
Query 773 AGACACGTGAAGTGATGTACAAAGGTTTCGTGTCGGAGCTTTTTATTCCATACATGGATC 832
| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 1049 AAACACGTGAAGTGATGTACAAAGGTTTCGTGTCGGAGCTTTTTGTTCCGTACATGGATC 1108
Query 833 CATCGGAAGCTTGGTACTTCAAGACTTACATGGACGCAGGAGAGTACGGGTTGGGGTTAC 892
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1109 CATCGGAAGCTTGGTACTTTAAGACTTACATGGACGCAGGAGAGTACGGGTTCGGGTTAC 1168
Query 893 AAACCATGTCGCTCGAGCC 911
|| ||||| |||| |||||
Sbjct 1169 AAGCCATGCCGCTGGAGCC 1187
Score = 248 bits (134), Expect = 1e-64
Identities = 154/164 (94%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 905 TCGAGCCGCTTAACGATTGTCCAAGAAACGCCGTTTATATGGACGGAATATTCGCTGCGG 964
||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 1214 TCGGGCCGCTTAATGATTGTCCAAGAAACGCCGTTTATATGGACGGAACATTCGCGGCGG 1273
Query 965 CTGACGGAACGCCGTTTGTGAGAGAGAATATGATTTGTGTGTTTGAGAGTTACGCCGGAG 1024
||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1274 CTGACGGAACGCCATATGTGAGAGAGAATATGATTTGTGTGTTTGAGAGTTATGCCGGAG 1333
Query 1025 ATATTGCGTGGCGTCACACCGAGTATCCCGTCCCCGGCATGCCG 1068
|||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1334 ATATTGCGTGGCGTCACACCGAGTATCCCGTCAACGGTATGCCG 1377
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97188255120
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5