BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg352546 Length=2229 Score E Sequences producing significant alignments: (Bits) Value AT4G02780.1 | Symbols: GA1, ABC33, ATCPS1, CPS, CPS1 | Terpenoi... 3197 0.0 > AT4G02780.1 | Symbols: GA1, ABC33, ATCPS1, CPS, CPS1 | Terpenoid cyclases/Protein prenyltransferases superfamily protein | chr4:1237767-1244813 REVERSE LENGTH=2570 Length=2570 Score = 3197 bits (1731), Expect = 0.0 Identities = 1930/2027 (95%), Gaps = 10/2027 (0%) Strand=Plus/Plus Query 1 ATGTCTCTTCAATATCATGCTCTAAACTCCATTCAAAGTACAAACTTTCTCAGTTCTACT 60 ||||||||||| ||||||| |||||||||||||| |||||||| |||||||||||||||| Sbjct 48 ATGTCTCTTCAGTATCATGTTCTAAACTCCATTCCAAGTACAACCTTTCTCAGTTCTACT 107 Query 61 AAAACAACATTATCTTCTTCTTTCCTTACAATCTCAGGATCTCCTCTCAATGTCGCTAGA 120 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 108 AAAACAACAATATCTTCTTCTTTCCTTACCATCTCAGGATCTCCTCTCAATGTCGCTAGA 167 Query 121 GACAAACCCAGAAGCGGTTCTATATATTGTTCAAAGCTTCGAACTCAAGAATACACTACT 180 |||||| ||||||||||||| ||| |||||||||||||||||||||||||||||| || | Sbjct 168 GACAAATCCAGAAGCGGTTCCATACATTGTTCAAAGCTTCGAACTCAAGAATACATTAAT 227 Query 181 TCTCAGGAGGTTCAACATGATCTGCCTCTAATAC---AGTGGCAACAGCTTCAAAGAGAA 237 ||||| ||||||||||||||| |||||||||||| ||||||||||||||||| ||||| Sbjct 228 TCTCAAGAGGTTCAACATGATTTGCCTCTAATACATGAGTGGCAACAGCTTCAAGGAGAA 287 Query 238 GATGCTCCTCAGATTAGTATTGGAAGTAATAATAATGCGA-TCGAAGAAGCAGTGAAGAG 296 |||||||||||||||||| |||||||||||| |||||| | || |||||||||||||||| Sbjct 288 GATGCTCCTCAGATTAGTGTTGGAAGTAATAGTAATGC-ATTCAAAGAAGCAGTGAAGAG 346 Query 297 TGTGAAATCGATCTTGAGAAACCTAACTGACGGGGAAATTACGATATCGGCTTATGATAC 356 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 347 TGTGAAAACGATCTTGAGAAACCTAACGGACGGGGAAATTACGATATCGGCTTACGATAC 406 Query 357 CGCTTGGGTTGCATTGATCGATGCCGGAGACAAAACTCCGGCGTTTCCCTCGGCCGTGAA 416 ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 407 AGCTTGGGTTGCATTGATCGATGCCGGAGATAAAACTCCGGCGTTTCCCTCCGCCGTGAA 466 Query 417 ATGGATCGCCGAGAACCAACTCTCCGATGGTTCTTGGGGTGACGCTTATCTCTTCTCTTA 476 ||||||||||||||||||||| ||||||||||||||||| || || |||||||||||||| Sbjct 467 ATGGATCGCCGAGAACCAACTTTCCGATGGTTCTTGGGGAGATGCGTATCTCTTCTCTTA 526 Query 477 TCATGATCGTCTCATCAATACACTTGCATGCGTCGTTGCTCTAAGATCATGGAATCTTTT 536 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 527 TCATGATCGTCTCATCAATACCCTTGCATGCGTCGTTGCTCTAAGATCATGGAATCTCTT 586 Query 537 TCCTCATCAATGCCACAAAGGAATCACGTTTTTCCGGGAAAATATTGGAAAGCTAGAAGA 596 ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 587 TCCTCATCAATGCAACAAAGGAATCACGTTTTTCCGGGAAAATATTGGGAAGCTAGAAGA 646 Query 597 CGAAAACGATGAGCATATGCCCATCGGATTTGAAGTAGCATTCCCATCGTTGCTTGAGAT 656 |||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 647 CGAAAATGATGAGCATATGCCAATCGGATTCGAAGTAGCATTCCCATCGTTGCTTGAGAT 706 Query 657 AGCTCGAGAAATAAACATTGATGTACCGTACGATTCTCCAGTCTTAAAAGATATATACGC 716 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 707 AGCTCGAGGAATAAACATTGATGTACCGTACGATTCTCCGGTCTTAAAAGATATATACGC 766 Query 717 CAAGAAAGAGCTAAAGCTAACAAGGATACCAAAAGAGATAATGCACAAGATACCAACAAC 776 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 767 CAAGAAAGAGCTAAAGCTTACAAGGATACCAAAAGAGATAATGCACAAGATACCAACAAC 826 Query 777 ATTGTTGCATAGTTTGGAGGGGATGCGTGATTTAGATTGGGAAAAGCTCTTGAAACTTCA 836 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 827 ATTGTTGCATAGTTTGGAGGGGATGCGTGATTTAGATTGGGAAAAGCTCTTGAAACTTCA 886 Query 837 ATCTCAAGACGGATCTTTCCTCTTCTCTCCTTCCTCTACCGCTTTTGCATTCATGCAGAC 896 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 887 ATCTCAAGACGGATCTTTCCTCTTCTCTCCTTCCTCTACCGCTTTTGCATTCATGCAGAC 946 Query 897 CCGAGACAGTAACTGCCTCCG-GTATTTGCGAAATGCCGTCAAACGTTTCAATGGAGGAG 955 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 947 CCGAGACAGTAACTGCCTC-GAGTATTTGCGAAATGCCGTCAAACGTTTCAATGGAGGAG 1005 Query 956 TTCCCAATGTCTTTCCGGTGGATCTTTTCGAGCACATATGGATAGTGGATCGGCTACAAC 1015 |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 1006 TTCCCAATGTCTTTCCCGTGGATCTTTTCGAGCACATATGGATAGTGGATCGGTTACAAC 1065 Query 1016 GGTTAGGGATATCAAGATACTTCGAGGAAGAGATTAAAGAGTGTCTTGACTATGTTCACA 1075 | ||||||||||| |||||||| || ||||||||||||||||||||||||||||| |||| Sbjct 1066 GTTTAGGGATATCGAGATACTTTGAAGAAGAGATTAAAGAGTGTCTTGACTATGTCCACA 1125 Query 1076 GATATTGGACCGACAAAGGCATATGTTGGGCTAGATGTTCCCATGTTCAAGACATCGACG 1135 |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | Sbjct 1126 GATATTGGACCGACAATGGCATATGTTGGGCTAGATGTTCCCATGTCCAAGACATCGATG 1185 Query 1136 ATACAGCAATGGCATTTAGGCTCTTAAGACTTCATGGATACCAAGTTTCCGCAGATGTAT 1195 ||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||| Sbjct 1186 ATACAGCCATGGCATTTAGGCTCTTAAGACAACATGGATACCAAGTGTCCGCAGATGTAT 1245 Query 1196 TCAAGAACTTTGAGAAAGAGGGGGAGTTTTTCTGTTTTGTGGGGCAATCAAACCAAGCGG 1255 |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| | Sbjct 1246 TCAAGAACTTTGAGAAAGAGGGAGAGTTTTTCTGCTTTGTGGGGCAATCAAACCAAGCAG 1305 Query 1256 TGACTGGTATGTTCAATCTATACCGGGCATCACAATTGGCGTTTCCAAGGGAAGATATAT 1315 | || ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| Sbjct 1306 TAACCGGTATGTTCAACCTATACCGGGCATCACAATTGGCGTTTCCAAGGGAAGAGATAT 1365 Query 1316 TGAAAAACGCCAAAGAGTTCTCTAATAAGTATCTGCAAGGAAAACGAGAGAGAGACGAGT 1375 ||||||||||||||||||| ||| |||| ||||||| || |||||| |||||||| |||| Sbjct 1366 TGAAAAACGCCAAAGAGTTTTCTTATAATTATCTGCTAGAAAAACGGGAGAGAGAGGAGT 1425 Query 1376 TGATTGATAAGTGGATTATAATGAAAGACTTACCTGGCGAGATTGGCTTTGCGTTAGAGA 1435 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1426 TGATTGATAAGTGGATTATAATGAAAGACTTACCTGGCGAGATTGGGTTTGCGTTAGAGA 1485 Query 1436 TTCCATGGTACGCAAGCTTGCCTCGAGTTGAGACGAGATTCTATATTGATCAATATGGTG 1495 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1486 TTCCATGGTACGCAAGCTTGCCTCGAGTAGAGACGAGATTCTATATTGATCAATATGGTG 1545 Query 1496 GAGAAAACGACGTTTGGATTGGCAAGACTCTTTATAGGATGCCATACGTGAACAATAATG 1555 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1546 GAGAAAACGACGTTTGGATTGGCAAGACTCTTTATAGGATGCCATACGTGAACAATAATG 1605 Query 1556 GATATCTGGAATTAGCAAAACAAGATTACAACAATTGCCAAGCTCTGCATCAGCTCGAAT 1615 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1606 GATATCTGGAATTAGCAAAACAAGATTACAACAATTGCCAAGCTCAGCATCAGCTCGAAT 1665 Query 1616 GGGACACATTCCAAAAGTGGTATGAAGAAAATAGGTTAAATGAGTGGGGTGTGCGCAGAA 1675 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1666 GGGACATATTCCAAAAGTGGTATGAAGAAAATAGGTTAAGTGAGTGGGGTGTGCGCAGAA 1725 Query 1676 ATGAGCTTCTCGAGTGTTACTTCTTAGCGGCTGCAACTATATTTGAATCAGAAAGGTCAC 1735 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1726 GTGAGCTTCTCGAGTGTTACTACTTAGCGGCTGCAACTATATTTGAATCAGAAAGGTCAC 1785 Query 1736 ATGAGCGAATGGTTTGGGCTAAGTCAAGTGTTTTGGTTAAAGCCATTTCTTCTT-TT--G 1792 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||| || | Sbjct 1786 ATGAGAGAATGGTTTGGGCTAAGTCAAGTGTATTGGTTAAAGCCATTTCTTCTTCTTTTG 1845 Query 1793 GGAAATCCTCTGACTCCAGAAGAAGCTTCTCCGAGCAGTTTCATAAATACATTGCCAATG 1852 || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 1846 GGGAATCCTCTGACTCCAGAAGAAGCTTCTCCGATCAGTTTCATGAATACATTGCCAATG 1905 Query 1853 CTCGACGAAGTGATCATCACTTCAATGGCAGGAGCATGAGATTGGACCGACCAGGATCGG 1912 |||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||| Sbjct 1906 CTCGACGAAGTGATCATCACTTTAATGACAGGAACATGAGATTGGACCGACCAGGATCGG 1965 Query 1913 TTCAGGCGAGTCGGCTTGTCGGAATCTTAATCGGAACTTTGAATCAAATGTCTTTTGACC 1972 ||||||| |||||||||| |||| | |||||||| ||||||||||||||||||||||||| Sbjct 1966 TTCAGGCCAGTCGGCTTGCCGGAGTGTTAATCGGGACTTTGAATCAAATGTCTTTTGACC 2025 Query 1973 TTTTCATGTCTCATGGCCGTGACGTTTACAATCTCCTCTATCAATCG 2019 |||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 2026 TTTTCATGTCTCATGGCCGTGACGTTAACAATCTCCTCTATCTATCG 2072 Score = 335 bits (181), Expect = 1e-90 Identities = 201/211 (95%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 2019 GGCAAGGAGAAACGATGAGAAGGAGAAGACAATAAGGAGTATGGAGACGGAGATGGAGAA 2078 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| Sbjct 2249 GGCAAGGAGAAACGATGAGAAGGAGAAGACAATAAAGAGTATGGAGAAGGAGATGGGGAA 2308 Query 2079 AATGGTTGAGTTAGCATTGTCGGAGAGTGACACATTTCGTGTCGTCAGCATAACGTTTCT 2138 ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| Sbjct 2309 AATGGTTGAGTTAGCATTGTCGGAGAGTGACACATTTCGTGACGTCAGCATCACGTTTCT 2368 Query 2139 TGATGTAGCAAAAGCGTTTTACTACTCTGCTTCATGTGGCGATCACCTCCAAACTCACAT 2198 ||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||||||| Sbjct 2369 TGATGTAGCAAAAGCATTTTACTACTTTGCTTTATGTGGCGATCATCTCCAAACTCACAT 2428 Query 2199 CTCCAAAGTCTTGTTTCAAAAAGTCTTGTAA 2229 |||||||||||||||||||||||||| |||| Sbjct 2429 CTCCAAAGTCTTGTTTCAAAAAGTCTAGTAA 2459 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 110591800635 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5