BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg352664

Length=915
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT4G01770.1 | Symbols: RGXT1 | rhamnogalacturonan xylosyltransf...  1297    0.0   
  AT4G01750.1 | Symbols: RGXT2 | rhamnogalacturonan xylosyltransf...  1253    0.0   
  AT4G01220.1 | Symbols:  | Nucleotide-diphospho-sugar transferas...   732    0.0   
  AT1G56550.1 | Symbols: RXGT1 | RhamnoGalacturonan specifi...   632    2e-180


> AT4G01770.1 | Symbols: RGXT1 | rhamnogalacturonan xylosyltransferase 
1 | chr4:764514-766865 FORWARD LENGTH=1405
Length=1405

 Score = 1297 bits (702),  Expect = 0.0
 Identities = 828/887 (93%), Gaps = 16/887 (2%)
 Strand=Plus/Plus

Query  1    ATGGCGCAGAAGCAACAGA-TCTTTCACCAACAACG-ACCATTCTCTTCCTCTCCTCGTT  58
            |||| |||||| ||||| | || || |  ||||| | | ||||||||||||||||| |||
Sbjct  51   ATGGAGCAGAAACAACATATTC-TT-A--AACAAAGTA-CATTCTCTTCCTCTCCTAGTT  105

Query  59   CTTATTCTTCAATCTCAGTCCGTCCCATCTCTGTCCGTAGCCGCAACGGtctcctccttc  118
            |||||||||||||||||| ||||||||||||| ||| |||||||||||||||||||||||
Sbjct  106  CTTATTCTTCAATCTCAGACCGTCCCATCTCTCTCCTTAGCCGCAACGGTCTCCTCCTTC  165

Query  119  tccttctcgctctcttctttctcctcGGTGTATTCTTACCCTGGCCAGGATCTCCCTTAT  178
            |||||||||||||| || | |||||||||||| |||| ||||||||||||||||||||||
Sbjct  166  TCCTTCTCGCTCTCGTCCTGCTCCTCGGTGTACTCTTGCCCTGGCCAGGATCTCCCTTAT  225

Query  179  TCCAGTTTCCAAACAGActttcttcttcttcttcttctctGTCACCGTCTCGGCAGTCCA  238
            ||| ||||||||| |||    | | ||||||||| | | |||||||||||| ||||||||
Sbjct  226  TCCTGTTTCCAAATAGA----C-T-TTCTTCTTC-T-T-TGTCACCGTCTCCGCAGTCCA  276

Query  239  AATGGCACGACTATACCCTTGCTCAGGCCGCTAAGTTCGTGGCCAAGAACGGCACTGTGA  298
            |||||| ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||
Sbjct  277  AATGGCGCGACTATACCCTTGCTCAGGCGGCTAGGTTCGTGGCCAAGAATGGCACTGTGA  336

Query  299  TCGTCTGCGCCGTGAGCTCACCATTCTTGCCTTTTCTCAACAACTGGTTGATTAGTGTTT  358
            | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  337  TAGTCTGCGCCGTGAGCTCACCATTCTTGCCTTTTCTCAACAACTGGTTGATTAGTGTTT  396

Query  359  CTAGACAGAAGCATCAAGAAAAAGTCCTCGTGATCGCTGAGGATTACGCTACTCTGTATA  418
            ||||||| ||||||||||| |||||||||||||||||||||||||||  |||||||||||
Sbjct  397  CTAGACAAAAGCATCAAGACAAAGTCCTCGTGATCGCTGAGGATTACATTACTCTGTATA  456

Query  419  AAGTTAACGAGAAGTGGCCTGGCCATGCCGTTCTTATTCCTCCGGCGCTCGATTCCAAAA  478
            |||| |||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||
Sbjct  457  AAGTCAACGAGAAGTGGCCTGGCCACGCCGTTCTTATTCCTCCAGCGCTCGATTCTAAAA  516

Query  479  CCGCATACAGTTTCGGTTCCCAGGGTTTCTTCAATTTCACAGCTCGAAGGCCGCAACATC  538
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  517  CCGCATTCAGTTTCGGTTCCCAGGGTTTCTTCAATTTCACAGCTCGAAGGCCGCAACATC  576

Query  539  TCTTGCAAGTTTTGGAGCTAGGTTACAATGTTATGTACAACGATGTTGATATGGTTTGGT  598
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  577  TCTTGCAAATTTTGGAGCTAGGTTACAATGTTATGTACAACGATGTTGATATGGTTTGGT  636

Query  599  TGCAAGATCCGTTTCAGTATTTGGAGGGAAGCCATGACGTGTACTTCACGGATGACTTGC  658
            |||||||||| |||| ||||||||||||||||||||||| ||| ||||| |||||| |||
Sbjct  637  TGCAAGATCCATTTCTGTATTTGGAGGGAAGCCATGACGCGTATTTCACCGATGACATGC  696

Query  659  CTCAAATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGGTCGAAACGGAGAGA  718
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct  697  CTCAAATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGATCGAAACGGAGAGA  756

Query  719  CGTATATATGTAGCTGCATGATTTACTTGCGACCCACTAATGGTGCAAAGCTTCTAATGA  778
            | |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct  757  CTTATATATGTAGCTGCATGATTTACTTGCGACCTACGAATGGTGCAAAGCTTCTAATGA  816

Query  779  AGAAATGGAGTGAGGAACTTCAATCCCAAGCTTGGTCTGAGTCCATCCGTTTTAAAGCCA  838
            |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct  817  AGAAATGGAGTGAGGAACTTCAATCCCAAGCTTGGTCTGAATCCATCCGTTTTAAAGCAA  876

Query  839  ATGATCAGCCTGCTTTTAACTTGGCACTTAACAAAACAGCTCATCAA  885
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  877  ATGATCAGCCTGCTTTTAACTTGGCACTTAACAAAACAGCTCATCAA  923


> AT4G01750.1 | Symbols: RGXT2 | rhamnogalacturonan xylosyltransferase 
2 | chr4:756363-758590 FORWARD LENGTH=1501
Length=1501

 Score = 1253 bits (678),  Expect = 0.0
 Identities = 826/896 (92%), Gaps = 16/896 (2%)
 Strand=Plus/Plus

Query  1     ATGGCGCAGAAGCAACAGATCTTTCACCAACAACGACCATTCTCTTCCTCTCCTCGTTCT  60
             ||||||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||||
Sbjct  172   ATGGCGCAGAAACAACAGACCCTTCACCAACAACGACCATTCTCTTCTTCTCCTCGTTCT  231

Query  61    TATTCTTCAATCTCAGTCCGTCCCATCTCTGTCCGTAGCCGCAACGGtctcctccttctc  120
             |||||||||||||||  ||||||||||| | ||| |||||||||||||||||||||| ||
Sbjct  232   TATTCTTCAATCTCAAACCGTCCCATCTTTCTCCTTAGCCGCAACGGTCTCCTCCTTGTC  291

Query  121   cttctcgctctcttctttctcctcGGTGTATTCTTACCCTGGCCAGGATCTCCCTTATT-  179
             ||||||||||||||| |||||||||||||||||||||| ||||| |||||||| || || 
Sbjct  292   CTTCTCGCTCTCTTCCTTCTCCTCGGTGTATTCTTACCTTGGCCCGGATCTCCTTTGTTG  351

Query  180   CCAGTTTCC-AA-ACAGAct-ttcttcttc-t-t-cttcttctctGTCACCGTC-TCGGC  232
             | | ||||| || | || || |||| |||| | | |||||||| |||| ||| | | | |
Sbjct  352   CTA-TTTCCGAACAAAGTCTCTTCTCCTTCTTATGCTTCTTCTTTGTCTCCG-CAT-GCC  408

Query  233   -AGTCCAAATGGCACGACTATACCCTTGCTCAGGCCGCTAAGTTCGTGGCCAAGAACGGC  291
              | ||  ||||||   ||||||||||||||||||| |||||||| || |||| |||||||
Sbjct  409   AAATCTGAATGGCGTAACTATACCCTTGCTCAGGCAGCTAAGTTTGTCGCCACGAACGGC  468

Query  292   ACTGTGATCGTCTGCGCCGTGAGCTCACCATTCTTGCCTTTTCTCAACAACTGGTTGATT  351
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  469   ACTGTGATCGTCTGCGCCGTGAGCTCACCATTCTTGCCTTTTCTCAACAACTGGTTGATT  528

Query  352   AGTGTTTCTAGACAGAAGCATCAAGAAAAAGTCCTCGTGATCGCTGAGGATTACGCTACT  411
             ||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||
Sbjct  529   AGTGTTTCTAGACAGAAGCATCAAGAAAAAGTCCTTGTGATCGCTGAGGATTACATTACT  588

Query  412   CTGTATAAAGTTAACGAGAAGTGGCCTGGCCATGCCGTTCTTATTCCTCCGGCGCTCGAT  471
             ||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||||||||
Sbjct  589   CTGTATAAAGTCAACGAAAAGTGGCCTGGCCACGCCGTTCTTATTCCTCCAGCGCTCGAT  648

Query  472   TCCAAAACCGCATACAGTTTCGGTTCCCAGGGTTTCTTCAATTTCACAGCTCGAAGGCCG  531
             || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| 
Sbjct  649   TCTAAAACCGCATACAGTTTCGGTTCCCAGGGTTTCTTCAACTTCACAGCTCGAAGGCCA  708

Query  532   CAACATCTCTTGCAAGTTTTGGAGCTAGGTTACAATGTTATGTACAACGATGTTGATATG  591
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct  709   CAACATCTCTTGCAAATTTTGGAGCTAGGTTACAATGTTATGTACAACGATGTTGATATG  768

Query  592   GTTTGGTTGCAAGATCCGTTTCAGTATTTGGAGGGAAGCCATGACGTGTACTTCACGGAT  651
             ||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||
Sbjct  769   GTTTGGTTGCAAGATCCATTTCAGTATTTGGAGGGAAGCCATGACGCGTACTTTACGGAT  828

Query  652   GACT-TGCCTCAAATAAAGCCTTTGAATCACTCTCATGATTTACCA-CATCCGGGTCGAA  709
             || | ||||||||||||||||||||||||||||||||||||||||| |  |||| || ||
Sbjct  829   GA-TATGCCTCAAATAAAGCCTTTGAATCACTCTCATGATTTACCAGCG-CCGGATCAAA  886

Query  710   ACGGAGAGACGTATATATGTAGCTGCATGATTTACTTGCGACCCACTAATGGTGCAAAGC  769
             |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct  887   ACGGAGAGACTTATATATGTAGCTGCATGATTTACTTGCGACCCACGAATGGTGCAAAGC  946

Query  770   TTCTAATGAAGAAATGGAGTGAGGAACTTCAATCCCAAGCTTGGTCTGAGTCCATCCGTT  829
             ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct  947   TTCTAATGAAGAAATGGAGTGAGGAACTTCAGTCCCAAGCTTGGTCTGAGTCCATCCGTT  1006

Query  830   TTAAAGCCAATGATCAGCCTGCTTTTAACTTGGCACTTAACAAAACAGCTCATCAA  885
             ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  1007  TTAAAGCAAATGATCAGCCTGCTTTTAACTTGGCACTTAACAAAACAGCCCATCAA  1062


> AT4G01220.1 | Symbols:  | Nucleotide-diphospho-sugar transferase 
family protein | chr4:513213-515853 REVERSE LENGTH=1506
Length=1506

 Score =  732 bits (396),  Expect = 0.0
 Identities = 719/864 (83%), Gaps = 65/864 (8%)
 Strand=Plus/Plus

Query  37    CCATTCTCTTCCTCTCCTCGTTCTTA-TTCTTCAATCTC-AGTCCGTCCCATCTCTGTCC  94
             ||||||||||| ||||||| |||  | |||||||||||| | | ||||| |||||| | |
Sbjct  260   CCATTCTCTTCTTCTCCTCTTTC-CACTTCTTCAATCTCAAAT-CGTCCAATCTCTCTAC  317

Query  95    GT-AGCCGCAACGGtctcctccttctccttctcgctctcttctttctcctcGGTGTATTC  153
              | ||||||||||||||||| |  ||||||||||||||| || || ||||||| ||||||
Sbjct  318   -TCAGCCGCAACGGTCTCCT-C--CTCCTTCTCGCTCTCCTCGTTATCCTCGGCGTATTC  373

Query  154   TTACCCTGGCCAGGATCTCCCTTATTCCAGTTTCCAAACAGActttcttcttcttcttct  213
             ||||||||| |||||||||| ||||||| || |||||||| |    | || || ||  | 
Sbjct  374   TTACCCTGGGCAGGATCTCCTTTATTCCCGTCTCCAAACA-A---AC-TC-TC-TC--C-  423

Query  214   tctctGTCACCGTCTCGGCAGTCCAAATGGCACGACTATACCCTTGCTCAGGCCGCT-AA  272
             | ||  |||          | |||||||||| ||||||| ||||  |||| || | | ||
Sbjct  424   T-TC--TCA----------A-TCCAAATGGCGCGACTATTCCCTCCCTCAAGCTG-TCAA  468

Query  273   GTTCGTGGCCAAGAACGGCACTGTGATCGTCTGCGCCGTGAGCTCA-CCATT-CTTGCCT  330
              ||||| || |||||||| ||||||||||| |||||||| |||| | || || |||||| 
Sbjct  469   ATTCGTAGCTAAGAACGGGACTGTGATCGTATGCGCCGTTAGCT-ATCC-TTACTTGCCG  526

Query  331   TTTCTCAACAACTGGTTGATTAGTGTTTCTAGACAGAAGCATCAAGAAAAAGTCCTCGTG  390
             ||||||||||| |||||||||||||||||||||||||||||||| ||  |||| ||||| 
Sbjct  527   TTTCTCAACAATTGGTTGATTAGTGTTTCTAGACAGAAGCATCAGGATCAAGTTCTCGTC  586

Query  391   ATCGCTGAGGATTACGCTACTCTGTATAAAGTTAACGAGAAGTGGCCTGGCCATGCCGTT  450
             ||||||||||||||||||||||| || |||||||||||||| |||||||| || ||||||
Sbjct  587   ATCGCTGAGGATTACGCTACTCTCTACAAAGTTAACGAGAAATGGCCTGGTCACGCCGTT  646

Query  451   CTTATTCCTCCGGCGCTCGATTC-CAAAACCGCAT-ACAGTTTCGGTTCCCAGGGTTTCT  508
             || |||||||||||||||||||| | | ||||| | |||  |||||||| ||||| ||||
Sbjct  647   CTCATTCCTCCGGCGCTCGATTCTC-AGACCGC-TCACAAATTCGGTTCTCAGGGATTCT  704

Query  509   TCAATTTCACAGCTCGAAGGCCGCAACATCTCTTGCAAGTTTTGGAGCTAGGTTACAATG  568
             ||||||||||||| || |||||||||||||||||| || |||||||| ||||||||||||
Sbjct  705   TCAATTTCACAGCACGGAGGCCGCAACATCTCTTGGAAATTTTGGAGTTAGGTTACAATG  764

Query  569   TTATGTACAACGATGTTGATATGGTTTGGTTGCAAGATCCGTTTCAGTATTTGGAGGGAA  628
             |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct  765   TTATGTACAACGATGTTGATATGGTTTGGTTGCAAGATCCGTTTCAGTATTTAGAGGGAA  824

Query  629   -GC-C-ATGACGTGTACTTCACGGATGACT-TGCCT-CAAATAAAGCCTTTGAATCACTC  683
              || | ||| | | ||||||| |||||| | || || ||| ||| ||||||| |||||||
Sbjct  825   AGCACGATG-C-T-TACTTCATGGATGA-TATGACTGCAATTAA-GCCTTTGGATCACTC  879

Query  684   TCATGATTTACCACATCCGGGTCGAAACGGAGAG-ACGTATATATGTAGCTGCATGATTT  742
             |||||||||||||| |||||||  ||| ||| || || ||||| |||||||| |||||||
Sbjct  880   TCATGATTTACCACCTCCGGGTAAAAAAGGA-AGGACTTATATTTGTAGCTGTATGATTT  938

Query  743   ACTTGCGACCCACTAATGGTGCAAAGCTTCTAATGAAGAAATGGAGT-GAGGAACTTCAA  801
              |||||| ||||||||||| ||||| ||||| ||||||||||||| | ||||| ||| ||
Sbjct  939   TCTTGCGTCCCACTAATGGCGCAAAACTTCTCATGAAGAAATGGA-TCGAGGAGCTTGAA  997

Query  802   TCCCAAGCTTGGTCT-GAGTCCATCCGTTTTAAAGCCAATGATCAGCCTGCTTTTAACTT  860
              | ||| |||||||  ||| | |   |    ||||| ||||||||||||| |||||||| 
Sbjct  998   ACGCAACCTTGGTCCAGAG-CTAA--G----AAAGCAAATGATCAGCCTGGTTTTAACTG  1050

Query  861   GGCACTTAACAAAACAGCTCATCA  884
             ||||||||||||||||||| ||||
Sbjct  1051  GGCACTTAACAAAACAGCTAATCA  1074


> AT1G56550.1 | Symbols: RXGT1 | RhamnoGalacturonan specific 
Xylosyltransferase 1 | chr1:21185662-21188369 REVERSE 
LENGTH=1625
Length=1625

 Score =  632 bits (342),  Expect = 2e-180
 Identities = 679/838 (81%), Gaps = 37/838 (4%)
 Strand=Plus/Plus

Query  68    CAATCTCAGTCCGTCCCATCTCTGTCCGT-AGCCGCAACGG--tc-tcctccttctcctt  123
             ||||||||  ||||| ||||||| ||| | | ||| |||||  || ||||||||||||||
Sbjct  322   CAATCTCAAACCGTCACATCTCTCTCC-TCAACCGTAACGGTCTCATCCTCCTTCTCCTT  380

Query  124   ctcgctctcttct-ttctcctcGGTGTATTCTTACCCTGGCCAGGATCTCCCTTATTCCA  182
             || |||||||| | || ||||||||||||||||||| | | ||  |||| |||| || ||
Sbjct  381   CTAGCTCTCTT-TGTTATCCTCGGTGTATTCTTACCTTTGACAAAATCTTCCTTGTT-CA  438

Query  183   -GTTTCCAAACA-GActttcttcttcttc-ttcttc-tctGTC-ACCGTCTCGGCAGTCC  237
              |||||||||||  ||  |||||||| || |||| | ||| ||  |  | ||||   |||
Sbjct  439   TGTTTCCAAACACAAC-ATCTTCTTC-TCTTTCTCCTTCT-TCTTCTTTATCGG-TCTCC  494

Query  238   AAATGGCACGACTATACCCTTGCTCAGGCCGCTAAGTTCGTGGCCAAGAACG-GCACTGT  296
              | |||| ||||||| |||||||||| |||| |||||| || || ||||||| | |||||
Sbjct  495   GACTGGCGCGACTATTCCCTTGCTCAAGCCGTTAAGTTTGTTGCTAAGAACGAG-ACTGT  553

Query  297   GATCGTCTGCGCCGTGAGCTCA-CCATTCTTGCCTTTTCTCAACAACTGGTTGATTAGTG  355
             ||||||||| || || |||| | || |||||||||||||| |||||||||||||||||  
Sbjct  554   GATCGTCTGTGCTGTTAGCT-ACCCTTTCTTGCCTTTTCTTAACAACTGGTTGATTAGCA  612

Query  356   TTTCTAGACAGAAGCATCAAGAAAAAGTCCTCGTGATCGCTGAGGATTACGCTACTCTGT  415
             ||||||||||||| |||||||||||||| || ||||||||||| || || |||||| |||
Sbjct  613   TTTCTAGACAGAAACATCAAGAAAAAGTTCTTGTGATCGCTGAAGACTATGCTACTTTGT  672

Query  416   ATAAAGTTAACGAGAAGTGGCCTGGCCATGCCGTTCTTATTCCTCCGGCGCTCGATTCC-  474
             | ||||| ||||| ||||||||||| ||||| ||||| |||||||||||| | || ||| 
Sbjct  673   ACAAAGTCAACGAAAAGTGGCCTGGTCATGCTGTTCTCATTCCTCCGGCGTTGGA-TCCT  731

Query  475   AAAACCGCATAC-AGTTTCGGTTCCCAGGGTTTCTTCAATTTCACAGCTCGAAGGCCGCA  533
              || ||||| || | ||| ||||||||||||||||||||| | ||| |||| ||||| ||
Sbjct  732   CAATCCGCACACAAATTT-GGTTCCCAGGGTTTCTTCAATCTGACATCTCGGAGGCCACA  790

Query  534   ACATCTCTTGCAA-GTTTTGGAGCTAGGTTACAATGTTATGTACAACGATGTTGATATGG  592
             |||||||||  ||  ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct  791   ACATCTCTT-AAACATTTTGGAGCTAGGTTACAATGTTATGTACAATGATGTTGATATGG  849

Query  593   TTTGGTTGCAAGATCCGTTTCAGTATTTGGAGGGAAGCCATGACGTGTACTTCACGGATG  652
             | ||| | |||||||| ||| | |||||  | |||||| | || |  ||||||| |||||
Sbjct  850   TCTGGCTACAAGATCCATTTGACTATTTACAAGGAAGCTACGATGCATACTTCATGGATG  909

Query  653   ACTTGCCT-CAAATAAAGCCTTTGAATCACTCTCATGATTTACCACATCCGGGTCGAAAC  711
             || ||  | | | ||| ||||||||||||||| ||||||||||||| ||   |||||| |
Sbjct  910   ACATGATTGCGATTAA-GCCTTTGAATCACTCCCATGATTTACCACCTCTAAGTCGAAGC  968

Query  712   GGAGAGACGTATATATGTAGCTGCATGATTTACTTGCGACCCACTAATGGTGCAAAGCTT  771
             ||||  || ||| |||||||||||||||||| ||||||  ||||| |||| | |||||||
Sbjct  969   GGAGTTACTTATGTATGTAGCTGCATGATTTTCTTGCGTTCCACTGATGGCGGAAAGCTT  1028

Query  772   CTAATGAAGAAATGGAGT-GAGGAACTTCAATCCCAAGCTTGGTCTGAGTC-CATCCGTT  829
             |||||||||| |||| || |||||| ||||| | ||| |||||  | |  | ||  |   
Sbjct  1029  CTAATGAAGACATGG-GTCGAGGAAATTCAAGCTCAACCTTGGAATAACACTCAAGCAAA  1087

Query  830   TTAAAGCCA-ATGATCAGCCTGCTTTTAACTTGG-CACTTAACAAAACAGCTCATCAA  885
               ||| ||| ||||||||||||||||||| | || ||||| ||||||||||| |||||
Sbjct  1088  G-AAA-CCACATGATCAGCCTGCTTTTAA-TCGGGCACTTCACAAAACAGCTAATCAA  1142



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 44708390830


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5