BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg352903
Length=2040
Score E
Sequences producing significant alignments: (Bits) Value
AT1G29880.1 | Symbols: | glycyl-tRNA synthetase / glycine--tRN... 1609 0.0
AT1G29870.1 | Symbols: | tRNA synthetase class II (G, H, P and... 1314 0.0
AT3G44740.1 | Symbols: | Class II aaRS and biotin synthetases ... 641 0.0
> AT1G29880.1 | Symbols: | glycyl-tRNA synthetase / glycine--tRNA
ligase | chr1:10459478-10462801 REVERSE LENGTH=2394
Length=2394
Score = 1609 bits (871), Expect = 0.0
Identities = 1399/1650 (85%), Gaps = 51/1650 (3%)
Strand=Plus/Plus
Query 183 TGAGGCATTCCGACAAGCCGTGGGCAATATTCTCGAGCGGCGTTTGTTCTACAAT-CCAT 241
|||||| || ||| |||| || | ||||| ||||||||||||||||||||| || || |
Sbjct 359 TGAGGCTTTTCGAAAAGCTGTTGTCAATACTCTCGAGCGGCGTTTGTTCTA-TATCCCTT 417
Query 242 C-TTTCGATATCTACGGTGGCATCACCGGACTTTTAGATTACGGTCCTAGTGGCCG-CCT 299
| ||| | |||||| ||||| || | |||||||| ||||| |||||| |||| | |
Sbjct 418 CGTTT-AAGATCTACAGTGGCGTCGCTGGACTTTTTGATTATGGTCCTCCTGGCTGTGC- 475
Query 300 TGTTGAACT-TAATGTACTTAGCCTCTGGCGT-AAGTTTTTCGTTAATGAGGAGGACATG 357
| || || | ||||| || ||| | |||||| || |||| || ||||||| |||||
Sbjct 476 TATT-AAATCCAATGTTCTCAGCTTTTGGCGTCAA-CATTTCATTCTTGAGGAGAACATG 533
Query 358 CTTGAAGTTGGTTGTTCA-GCTTTAACACCAGAGATTGTTTTCAATGCATCTGGGCACGT 416
|| ||||||| |||| || | | | ||||||||| ||||| |||| ||||||||||| ||
Sbjct 534 CTAGAAGTTGATTGTCCATG-TGTGACACCAGAGGTTGTTCTCAAGGCATCTGGGCATGT 592
Query 417 AAAAAAGTTCACTGATCTTATGGTCAAGGATGAGGTAAA-TGGAGCAT-TTCACCGTGCG 474
| | |||||||||||||||||||| |||||||| | ||| |||| ||| || |||||||
Sbjct 593 AGATAAGTTCACTGATCTTATGGTTAAGGATGA-GAAAACTGGAACATGTT-ACCGTGCT 650
Query 475 GACCACTTGGTCAAGGGTTATTGT---GA-AAGTC-GAAAGAAAGATGTTACCATCTCTG 529
||||||||| |||||| ||||||| || ||| | | |||||||| ||||||||||||
Sbjct 651 GACCACTTGCTCAAGGATTATTGTACCGAGAAG-CTG-GAGAAAGATCTTACCATCTCTG 708
Query 530 CTGAGAAAGCTGCTGAATTGGACAATGTTCTCGCTGTTGTGGAAGATCTTTCTGCTGAAG 589
|||||||||||||||||||| | ||||||| |||||| |||||||| ||||| |||||
Sbjct 709 CTGAGAAAGCTGCTGAATTGAAGGATGTTCTTGCTGTTATGGAAGATTTTTCTCCTGAAC 768
Query 590 AGCTTGGTGCCAAAATAAAGGAGTATGGTATCACTGCTCCCCACACTAAGAATCCACTTT 649
|||| |||||||| || | ||||||||| ||||||||||| |||| ||||||||||| |
Sbjct 769 AGCTAGGTGCCAAGATCAGGGAGTATGGGATCACTGCTCCAGACACGAAGAATCCACTCT 828
Query 650 CTCATCCTCCTCGCCCGTTCAACTTGATGTTTCAAACATTCTTTGGCCCAACTGG-TTCA 708
|| ||||| | |||||| || |||||||||||||||| | |||||||| |||| || |
Sbjct 829 CTGATCCT--T-ACCCGTTTAATTTGATGTTTCAAACATCCATTGGCCCATCTGGTTTGA 885
Query 709 -TCTCTCGGTTACCTCCGTCCTGAAACTGCTCAAGGCATTTTTGTCAACTTTATGAACTA 767
|| || |||||| | |||||||||||||||||||| |||||||||||||||| | |||
Sbjct 886 TTC-CT-GGTTACATGCGTCCTGAAACTGCTCAAGGTATTTTTGTCAACTTTAAGGACT- 942
Query 768 T-TA-TAATGACAATGGG-AGAAAACTTCCTCTTGCCGTGGCTCAAGTTGGTCGAGTCTT 824
| || | || |||||||| || ||||||||| |||||| ||||||| |||||| || |||
Sbjct 943 TGTACT-ATTACAATGGGAAG-AAACTTCCTTTTGCCGCGGCTCAAATTGGTCAAGCCTT 1000
Query 825 TAGGAATGAGATATCTCCTCGTCAAGGGCCTATTAGAGCTCGCGAATTCTTGCTGGCAGA 884
||| ||||||||||||||||| ||||||| | |||||| ||| |||||| |||||||||
Sbjct 1001 TAGAAATGAGATATCTCCTCGACAAGGGCTTCTTAGAGTTCGTGAATTCACGCTGGCAGA 1060
Query 885 AATTGAACACTTTGTCGATCCTGAGAATAAGTCACATCCCAAATTCCCTGATGTAG-AAT 943
||||| ||||| || ||||||||||||||||||||||| || ||| |||| |||| ||
Sbjct 1061 GATTGAGCACTTCGTTGATCCTGAGAATAAGTCACATCCTAAGTTCTCTGACGTAGCAA- 1119
Query 944 TATTGGAATTCCTTATGTTTCCAAGAGAAGAACAAGAAAAGTCTGGCCAATCTGCTAAAA 1003
|||||||||||||||||| ||||| ||||||| ||| ||||||||||||||| ||||
Sbjct 1120 AATTGGAATTCCTTATGTTCCCAAGGGAAGAAC---AAATGTCTGGCCAATCTGCCAAAA 1176
Query 1004 AACTTTGCCTCGGCGAAGCTGTTGCCAAGGGGACTGTCAACAGTGAAACTCTAGGATACT 1063
|||||||||| || ||||||||||| || || ||||| |||| |||||||||||||||||
Sbjct 1177 AACTTTGCCTTGGTGAAGCTGTTGCTAAAGGTACTGTGAACAATGAAACTCTAGGATACT 1236
Query 1064 TCATTGGGAGAGTGTATCTTTTCCTTGTC-CATCTTGGCATAGACAAGGAACGGCTGCGT 1122
|||||||||||||||||||||||||| | | ||||||||| |||||||||||||||||
Sbjct 1237 TCATTGGGAGAGTGTATCTTTTCCTT-ACTCGTCTTGGCATTGACAAGGAACGGCTGCGC 1295
Query 1123 TTCCGCCAGCA-CAAAGCAAAAGAAATGGCCCACTATGCAGCAGATTGTTGGGATGCTGA 1181
||||| ||||| | |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1296 TTCCGTCAGCATC-TAGCAAATGAAATGGCCCACTATGCAGCAGATTGTTGGGATGCTGA 1354
Query 1182 AATTGAGTGTTCATATGGGTGGATTGAATGTGTTGGAATTGCAGATCGGTCTGCTTACGA 1241
|||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 1355 AATTGAAAGTTCATATGGGTGGATTGAATGTGTTGGGATTGCAGATAGGTCTGCTTACGA 1414
Query 1242 CTTATGTGCCCACTCCGAAAAAAGTGGCGTTTCTCTTGTGGCTGAAGCGAAATTGGCAGA 1301
|||| |||| ||||| || |||||||| | ||||||||||||||| |||||| |||||
Sbjct 1415 CTTACGTGCTCACTCTGACAAAAGTGGTACTCCTCTTGTGGCTGAAGAGAAATTTGCAGA 1474
Query 1302 GCCTAAAGAAGTAGAGAAACTTGTTATTACTCCTGTGAAGAAAGAACTGGGTGTTGCATT 1361
||||||||||||||||||||||| || |||||||||||||||||||||||| |||||||
Sbjct 1475 ACCTAAAGAAGTAGAGAAACTTGTGATAACTCCTGTGAAGAAAGAACTGGGTCTTGCATT 1534
Query 1362 CAAGGCAGATCAAAAGAATGTGGTTGAAGCTTTAGAGGCGATGAATGAGCAAGAAGCTAT 1421
||||| | |||||||||||||||||||| |||| ||||||||||||||| ||||||||||
Sbjct 1535 CAAGGGAAATCAAAAGAATGTGGTTGAATCTTTGGAGGCGATGAATGAGGAAGAAGCTAT 1594
Query 1422 GGAGATGAAGGCAACCCTGGAATCCAAAGGTGAAGCAGAGTTTGAAGTGTGTACCCTCGG 1481
||||||||| |||||||||||||||||||| |||| |||||| | |||||||||||
Sbjct 1595 GGAGATGAAAGCAACCCTGGAATCCAAAGGGGAAGTGGAGTTTTACGTGTGTACCCTAAA 1654
Query 1482 GAAAAACGTGACCATCAAGAAGAACATGGTGTCAATCTCAAAGAAGAGGACGGAAGTGCG 1541
||||| ||||| ||||||||| ||||||||||| || |||||| ||| || | ||| ||
Sbjct 1655 GAAAAGCGTGAACATCAAGAAAAACATGGTGTCTATATCAAAGGAGAAGAAGAAAGAGCA 1714
Query 1542 CAAGCGGTTTTTCACTCCGTCAGTGATTGAACCATCGTTTGGTATTGGTCGGATTATGTA 1601
| ||||| |||||||||| ||||||||||||||||||||||| ||||||||||| || ||
Sbjct 1715 CCAGCGGGTTTTCACTCCATCAGTGATTGAACCATCGTTTGGGATTGGTCGGATCATATA 1774
Query 1602 TTGTCTCTACGAGCATTGTTTCAGCACAAGGCCAAGCAAGGC-GGGAGATGAGCAACTGA 1660
|||||| || ||||||||||||||||||||||||||||| || ||| |||||||| |||
Sbjct 1775 TTGTCTGTATGAGCATTGTTTCAGCACAAGGCCAAGCAAAGCAGGG-GATGAGCAGTTGA 1833
Query 1661 A-TGTGTTCCGTTTCTCTCCTCTTGTAGCACCCTTCAAGTGCACGGTTTTGCCGCTTGTG 1719
| | ||||||||||| ||||||||||||| ||| |||||||||||||||| ||||||||
Sbjct 1834 ACT-TGTTCCGTTTCCCTCCTCTTGTAGCTCCCATCAAGTGCACGGTTTTCCCGCTTGTT 1892
Query 1720 CAGAACCAACAATTAGAGGAAGCAGCGAAAGTCATTTCCAAACAACTCAAATCTGAT-GG 1778
|||||||||||||| ||||||| ||| ||||| |||||||| ||||| |||| | ||
Sbjct 1893 CAGAACCAACAATTCGAGGAAGTAGCCAAAGTTATTTCCAAGGAACTCGCCTCTG-TCGG 1951
Query 1779 CATCAAACACAAGATTGAAATCGCTGTTAC 1808
||| || |||||||| ||| ||| |||
Sbjct 1952 TATCTCCCATAAGATTGACATCACTGGTAC 1981
> AT1G29870.1 | Symbols: | tRNA synthetase class II (G, H, P and
S) family protein | chr1:10456902-10458782 REVERSE LENGTH=1392
Length=1392
Score = 1314 bits (711), Expect = 0.0
Identities = 1170/1385 (84%), Gaps = 58/1385 (4%)
Strand=Plus/Plus
Query 41 AGAAAT-CTTCGACCGTCGAAGACCAGGAGA-TGC-CCATCCGACCTCTCAATGCCT-CA 96
|||||| ||| | |||||||||| || || | | | || || || ||||| | | || |
Sbjct 32 AGAAATCCTT-GGCCGTCGAAGATCAAGA-ACT-CGCCGTCGGAACTCTCGAGGACTCCC 88
Query 97 AGCGCAGAGAAACCGGAGATCGACGTTGCAATTGGGGGTCTCTTCGACATATTGAAGGCT 156
| ||||| |||||| |||| | ||| ||| ||| | | | || | ||| || ||| ||
Sbjct 89 A-CGCAGCGAAACCAGAGACCAACGCTGCGATT-GAGCT-TC-CCAACAAATCCAAGCCT 144
Query 157 GAGAAATCTGTC-GTCGAGAAGGAGCC-TGAGGCA-TTCCGACAAGCCGTGGGCAATATT 213
|||||||| | | ||||||||||| || ||||| | || || |||| |||| ||| | |
Sbjct 145 GAGAAATCCG-CGGTCGAGAAGGA-CCGTGAGG-ATTTTCGGGAAGCAGTGGTCAAAACT 201
Query 214 CTCGAGCGGCGTTTGTTC-TACAATCCATCTTTCGATATCTACGGTGGCATCACCGGACT 272
||||| |||| ||||||| | | || |||||||||||||||| |||| || | ||||
Sbjct 202 CTCGATCGGCTTTTGTTCGT-CCATAAATCTTTCGATATCTACCATGGCGTCGCTGGAC- 259
Query 273 TTTA-GATTACGGTCCT-AGTGGCCG-CCTTGTTGAACTTAATGTACTTAGCCTCTGGCG 329
|||| |||| ||||||| | ||| || | ||||||||||||| ||||||||||||||||
Sbjct 260 TTTACGATTTCGGTCCTCA-TGGTCGTAC-TGTTGAACTTAATATACTTAGCCTCTGGCG 317
Query 330 TAAGT-TTTTCGTTAATGAGGAGGACATGCTTGAAGTTGGTTGTTCAGCTTTAACACCAG 388
||||| |||| ||| |||| ||||||||| | || |||| |||| ||||||| |||||||
Sbjct 318 TAAGTGTTTT-GTTGATGAAGAGGACATGATGGAGGTTGCTTGTACAGCTTTGACACCAG 376
Query 389 AGATTGTTTTCAATGCATCTGGGCACGTAAAAAAGTTCACTGATCTTATGGTCAAGGATG 448
|| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 377 AGGCCGTTTTCAACGCATCTGGGCATGTAAAAAAGTTCACTGATCTTATGGTCAAGGATG 436
Query 449 AGGTAAATGGAGCATTTCACCGTGCGGACCACTTGGTCAAGGGTTATTGTGAAAGTCGAA 508
||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 437 AGGTAGATGGAGCATTTCACCGTGCGGACCACTTGGTCAAAAGTTATTGTGAAAACCGAA 496
Query 509 AGAAAGATGTTACCATCTCTGCTGAGAAAGCTGCTGAATTGGACAATGTTCTCGCTGTTG 568
|||||||| |||||||||||||||||| |||||||||||||| || ||| | ||| ||
Sbjct 497 AGAAAGATCCTACCATCTCTGCTGAGAATGCTGCTGAATTGGATAAAGTTATAGCTCATG 556
Query 569 TGGAAGATCTTTCTGCTGAAGAGCTTGGTGCCAAAATAAAGGAGT-A-TGGTATCACTGC 626
|||||||||||||||||||||||||||||| | | | ||| | | || | ||| ||
Sbjct 557 TGGAAGATCTTTCTGCTGAAGAGCTTGGTG---GAGT-ATGGAATCACTGCT-CCACAGC 611
Query 627 TCCCCACACTAAGAATCCACTTTCTCATCCTCCTCGCCCGTTCAACTTGATGTTTCAAAC 686
||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 612 TCCAGTCACGAAGAATCCACTTTCTCATCCTCCTCGCCCCTTCAACTTGATGTTTCAAAC 671
Query 687 ATT-CTTTGGCCCAACTGGTTCATCT-CTCGGTTACCTCCGTCCTGAAACTGCTCAAGGC 744
|| |||||| ||| |||||| | | | |||||| | |||||||||||||||||||||
Sbjct 672 -TTCCTTTGGAGCAAGTGGTTCGT-TGATAGGTTACTTGCGTCCTGAAACTGCTCAAGGC 729
Query 745 A-TTTTTGTCAACTTTATGAACTATTATAATGACAATGGGAGAAAACTTCC-TCTTGCCG 802
| |||||| |||||| | | | ||||||||| ||||||||||||||||| | ||||||
Sbjct 730 AGTTTTTG-CAACTTCAAGGATTATTATAATTTGAATGGGAGAAAACTTCCGT-TTGCCG 787
Query 803 TGGCTCAAGTTGGTCGAGTCTTTAGGAATGAGATATCTCCTCGTCAAGGGCCTATTAGAG 862
|||||||||||||||||||||||||||||||||||||||| |||||||||| | |||||
Sbjct 788 TGGCTCAAGTTGGTCGAGTCTTTAGGAATGAGATATCTCCACGTCAAGGGCTTCTTAGAA 847
Query 863 CTCGCGAATTCT-TGCTGGCAGAAATTGAACACTTTGT-CGATCCTGAGAATAAGTCACA 920
|||| |||||| | |||||||||||||| |||||||| | | |||||| ||||||||||
Sbjct 848 CTCGTGAATTCACT-CTGGCAGAAATTGAGCACTTTGTTC-ACCCTGAGCATAAGTCACA 905
Query 921 TCCCAAATTCCCTGATGTAG-AATTA-TTGGAATTCCTTATGTTTCCAAGAGAAGAACAA 978
| | || ||| ||||||||| || | ||| || ||||||||||||||||||||||||||
Sbjct 906 TTCTAAGTTCTCTGATGTAGCAAA-ACTTG-AACTCCTTATGTTTCCAAGAGAAGAACAA 963
Query 979 GAAAAGTCTGGCCAATCTGCTAAAAA-ACTTTGCCTCGGCGAAGCTGTTGCCAAGGGG-A 1036
||||| ||||||||| ||| ||||| ||||||||| |||||||||||||| |||||| |
Sbjct 964 GAAAAACCTGGCCAATTTGC-AAAAAGACTTTGCCTTGGCGAAGCTGTTGCTAAGGGGCA 1022
Query 1037 CTGTCAACAGTGAAACTCTAGGATACTTCATTGGGAGAGTGTATCTTTTCCTTGTCCATC 1096
||| |||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||
Sbjct 1023 -TGTGAACAGTGAGACTCTAGGATTCTTCATTGGGAGAGTGTATCTTTTCCTTATCCGTC 1081
Query 1097 TTGGCATAGACAAGGAACGGCTGCGTTTCCGCCAGCA-CAAAGCAAAAGAAATGGCCCAC 1155
|||| |||||||||||||| ||||| ||||| || || | ||||| |||||||| |||
Sbjct 1082 TTGGAATAGACAAGGAACGCCTGCGCTTCCGTCATCATCTT-GCAAATGAAATGGCACAC 1140
Query 1156 TATGCAGCAGATTGTTGGGATGCTGAAATTGAGTGTTCATATGGGTGGATTGAATGTGTT 1215
|||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1141 TATGCAACCGATTGTTGGGATGCTGAAATTGAGTGTTCATATGGTTGGATTGAATGTGTT 1200
Query 1216 GGAATTGCAGATCGGTCTGCTTACGACTTATGTGCCCACTCCGAAAAAAGTGGCGTTTCT 1275
|||||||||||| |||||| |||||||||| |||| |||||||||||||||||| | ||
Sbjct 1201 GGAATTGCAGATAGGTCTGATTACGACTTACGTGCTCACTCCGAAAAAAGTGGCCATGCT 1260
Query 1276 CTTGTGGCTGAAGCGAAA-TTGGCAGAGCCTAAAGAAGTAGAGAAACTTGTTATTACTCC 1334
||||||||| ||| |||| ||| ||||||||| ||||||||||||||||| |||||| ||
Sbjct 1261 CTTGTGGCTCAAGAGAAACTTG-CAGAGCCTATAGAAGTAGAGAAACTTGCTATTACACC 1319
Query 1335 TGTGAAGAAAGAACTGGGTGTTGCATTCAAGGCAGATCAAAAGAATGTGGTTGAAGCTTT 1394
|| || ||||||| ||||| ||||||||||| | |||||||||||||||||||||||||
Sbjct 1320 TGAGATGAAAGAATTGGGTCCTGCATTCAAGGGAAATCAAAAGAATGTGGTTGAAGCTTT 1379
Query 1395 AGAGG 1399
||||
Sbjct 1380 GGAGG 1384
> AT3G44740.1 | Symbols: | Class II aaRS and biotin synthetases
superfamily protein | chr3:16295970-16297805 REVERSE LENGTH=1224
Length=1224
Score = 641 bits (347), Expect = 0.0
Identities = 539/629 (86%), Gaps = 23/629 (4%)
Strand=Plus/Plus
Query 776 ACAATGGGAGAAAACTT-CCTCTTGCCG-TGGCTCAAGTTGGTCGAGTCTTTAGGAATGA 833
|||||||||| ||| || ||| |||| | | |||||| |||||| | |||||| |||||
Sbjct 331 ACAATGGGAGGAAATTTCCCT-TTGCTGCT-GCTCAAATTGGTC-AACCTTTAGAAATGA 387
Query 834 GATATCTCCTCGTCAAGGGCCTATTAGAGCTCGCGAATTCTTGCTGGCAGAAATTGAACA 893
|||||||| ||||||||||| | |||||| | | |||||| ||||||||||||||| ||
Sbjct 388 GATATCTCATCGTCAAGGGCTTCTTAGAGTTTGTGAATTCACGCTGGCAGAAATTGAGCA 447
Query 894 CTTTGTCGATCCTGAGAATAAGTCACATCCCAAATTCCCTGATGTAG--AATTATTGGAA 951
||||| ||||||| ||||||||||||||| |||||| ||||||||| |||| || |||
Sbjct 448 TTTTGTTGATCCTGGGAATAAGTCACATCCGAAATTCTCTGATGTAGCAAATT-TT-GAA 505
Query 952 TTCCTTATGTTTCCAAGAGAAGAACAAGAAAAGTCTGGCCAATCTGCTAAAAAACTTTGC 1011
|||||||||||||||||||| |||| ||| ||||||||||||||| ||||||||||||
Sbjct 506 TTCCTTATGTTTCCAAGAGAGGAAC---AAATGTCTGGCCAATCTGCGAAAAAACTTTGC 562
Query 1012 CTCGGCGAAGCTGTTGCCAAGGGGACTGTCAACAGTGAAACTCTAGGATACTTCATTGGG 1071
|| ||||||| |||||||||||| ||||| |||| |||||| |||| |||||||||| |
Sbjct 563 CTTGGCGAAGTTGTTGCCAAGGGAACTGTGAACAAAGAAACTGTAGGCTACTTCATTGCG 622
Query 1072 AGAGTGTATCTTTTCCTTGTCCATCTTGGCATAGACAAGGAACGGCTGCGTTTCCGCCAG 1131
|||||||||||||||||||||| |||||||| ||||||||||| | ||||||||||||||
Sbjct 623 AGAGTGTATCTTTTCCTTGTCCGTCTTGGCACAGACAAGGAACAGTTGCGTTTCCGCCAG 682
Query 1132 CACAAAGCAAAAGAAATGGCCCACTATGCAGCAGATTGTTGGGATGCTGAAATTGAGTGT 1191
|| ||||| |||||||||| |||||| |||||||||| |||||||||| ||||| ||
Sbjct 683 CATTTTGCAAATGAAATGGCCCGCTATGCTGCAGATTGTTTGGATGCTGAATTTGAGAGT 742
Query 1192 TCATATGGGTGGATTGAATGTGTTGGAATTGCAGATCGGTCTGC-TTACGACTTATGTGC 1250
|||||||||||||||||||||||||| || |||||| ||||||| || ||||||| ||||
Sbjct 743 TCATATGGGTGGATTGAATGTGTTGGTATAGCAGATAGGTCTGCATT-CGACTTACGTGC 801
Query 1251 CCACTCCGAA--AAAAGTGGCGTTTCTCTTGTGGCTGAAGCGAAATTGGCAGAGCCTAAA 1308
|||||| | | |||||| || | || |||||||| | |||||| |||| ||||||
Sbjct 802 CCACTCGGTAGGAAAAGTTGC-T--CT---GTGGCTGA-GAGAAATTTCCAGAACCTAAA 854
Query 1309 GAAGTAGAGAAACTTGTTATTACTCCTGTGAAGAAAGAACTGGGTGTTGCATTCAAGGCA 1368
||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||| |
Sbjct 855 GAAGTAGAGAAACTTGTGATTACTCCTGTGAAGAAAGAACTGGTTCTTGCATTCAAGGGA 914
Query 1369 GATCAAAAGAATGTGGTTGAAGCTTTAGA 1397
|||||||| |||| ||| || |||||||
Sbjct 915 AATCAAAAGCATGTCGTTAAATCTTTAGA 943
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101103897630
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5