BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg352947
Length=3174
Score E
Sequences producing significant alignments: (Bits) Value
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like s... 4017 0.0
AT4G37680.1 | Symbols: HHP4 | heptahelical protein 4 | chr4:177... 414 2e-114
AT2G40710.1 | Symbols: | Haemolysin-III related integral membr... 379 8e-104
AT4G38320.1 | Symbols: HHP5 | heptahelical protein 5 | chr4:179... 353 5e-96
AT4G38290.1 | Symbols: | Haemolysin-III related integral membr... 313 8e-84
AT4G40000.1 | Symbols: | S-adenosyl-L-methionine-dependent met... 193 1e-47
> AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE LENGTH=2505
Length=2505
Score = 4017 bits (2175), Expect = 0.0
Identities = 2392/2499 (96%), Gaps = 6/2499 (0%)
Strand=Plus/Plus
Query 1 ATGAGAAGCTATCGCAGTTGGCGTCAAGTGCAAGAAACGATACGTTTATACTCTTCGTCT 60
||||||||||||||| |||||||| |||| |||||||| |||||||||||||| || ||
Sbjct 1 ATGAGAAGCTATCGCTGTTGGCGTAAAGTCCAAGAAACCATACGTTTATACTCCTCTTCA 60
Query 61 TCTTCTTCTACTTC-AGCTCTTTTGGAATTTGTAAACGCAGAATTTCCTTCTACAATAGG 119
||||||||| |||| || |||||||||||||||||||||||| ||||||||||| |||||
Sbjct 61 TCTTCTTCTGCTTCAAG-TCTTTTGGAATTTGTAAACGCAGATTTTCCTTCTACGATAGG 119
Query 120 AATTCGAGGAAGACGCGAATTTGCTCGTCTCTTGCAGCTGCGTGCGTTAGATGATCCGTT 179
||| |||||||| |||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 120 AATCCGAGGAAGGCGCGAATTTGCTCGTCTCTTGCAGCTGCGTGCGTCAGATGATCTGTT 179
Query 180 GCTTTATCACAATGTAGTTCATGGTCAGATTATTGTTTCAGGTCTTGAGTTAGATACGTA 239
|| |||||| |||||||||||||||||||||||||||| || || ||||||||||||||
Sbjct 180 GCATTATCAAAATGTAGTTCATGGTCAGATTATTGTTTGGGGCCTCGAGTTAGATACGTA 239
Query 240 TCTTAGCAACATTTTGATGAATTTGTATTCGAGAGCTGGTGGTATGGTTTATGCACGTAA 299
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 240 TCTTAGCAACATTTTGATCAATTTGTATTCGAGAGCTGGTGGTATGGTTTATGCACGTAA 299
Query 300 GGTGTTTGAGAAAATGCCTGAGAGAAACTTGGTTACTTGGTCTACCATGGTTTCAGCTTG 359
|||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 300 GGTGTTCGAGAAAATGCCTGAGAGAAACTTAGTTTCTTGGTCTACCATGGTTTCAGCTTG 359
Query 360 CAACCATCATGGGTTTTACGAGGAGTCTTTGGTGGTTTTCTTAGACTTCTGGAGAACTAG 419
||||||||||||| |||| ||||| |||||||||||||||||||| ||||||||||||||
Sbjct 360 CAACCATCATGGGATTTATGAGGAATCTTTGGTGGTTTTCTTAGAGTTCTGGAGAACTAG 419
Query 420 AAAAAACAGTCCGAATGAATATATTTTGTCGAGTTTTATTCAAGCTTGTTCGGGATTAGA 479
|||| ||||||||||||||||||||||||||||||||||||||||||| || || |||||
Sbjct 420 AAAAGACAGTCCGAATGAATATATTTTGTCGAGTTTTATTCAAGCTTGCTCAGGCTTAGA 479
Query 480 TGGTAGTGGGCGTTGGATGGTGTTTCAACTGCAAAGTTTTCTTGTCAAGAGTAGGTTTGA 539
|||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct 480 TGGTCGTGGGCGTTGGATGGTGTTTCAACTACAAAGTTTTCTTGTCAAGAGTGGGTTTGA 539
Query 540 TAGGGATGTTTATGTTGGTACCTTGTTGATTGATTTTTATTTAAAGGAAGGTAATATCGA 599
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 540 TAGGGATGTTTATGTTGGTACCTTGTTGATTGATTTTTATTTGAAGGATGGTAATATCGA 599
Query 600 TTATGCGAGGCTTGTGTTTGATGCTTTACCAGAGAAATCTACTGTGACTTGGACGACAAT 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 600 TTATGCGAGGCTTGTGTTTGATGCTTTACCAGAGAAATCTACTGTGACTTGGACGACCAT 659
Query 660 GATCAGTGGGTGTGTAAAAATGGGAAGAAGCTACGTTTCATTACAGCTATTCTACCAACT 719
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 660 GATCAGTGGGTGTGTAAAAATGGGAAGAAGCTACGTTTCATTACAGCTGTTCTACCAACT 719
Query 720 AATGGAAGGA-AATGTTGTTCCGGATGGTTACATCCTTTCGACGGTTTTAAGTGCGTGTT 778
||||||| || ||||||||||| ||||| |||||||||||||||||| ||||||| ||||
Sbjct 720 AATGGAA-GACAATGTTGTTCCAGATGGCTACATCCTTTCGACGGTTCTAAGTGCATGTT 778
Query 779 CAATACTTCCGTTTCTTGAAGGCGGGAAGCAGATTCATGCGCACATCTTAAGATACGGAC 838
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 779 CAATACTTCCGTTTCTTGAAGGTGGGAAGCAGATTCATGCGCACATCTTAAGATATGGAC 838
Query 839 ATGAAAAGGATGCCTCACTGATGAATGTGCTTATAGATTCTTATGTGAAGTGTGGCAGAG 898
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 839 TTGAGATGGATGCCTCACTGATGAATGTGCTTATAGATTCTTATGTGAAGTGTGGCAGAG 898
Query 899 TTAGAGCGGCTCATAAGCTATTCGATGGAATGCCAAATAAAAACATCATTTCGTGGACCA 958
||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 899 TTATAGCGGCTCATAAGCTATTCAATGGAATGCCGAATAAAAACATCATTTCGTGGACCA 958
Query 959 CTTTACTGTCTGGTTATAAGCAGAACTCTCTTCATAAAGAAGCCATGGAATTGTTTACCA 1018
|||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 959 CTTTGCTCTCTGGTTATAAGCAGAACGCTCTTCATAAAGAAGCCATGGAATTGTTTACCA 1018
Query 1019 GTATGCCAAAGTTTGGTTTAAAGCCGGATATGTTTGCTTGCTCTAGCATACTCACATCTT 1078
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1019 GTATGTCAAAGTTTGGTTTAAAGCCGGATATGTATGCTTGCTCTAGCATACTCACATCTT 1078
Query 1079 GTGCCTCACTTCATGCTTTGGAATTTGGAACACAAGTTCATGCTTACACTATCAAAGCCA 1138
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1079 GTGCCTCACTTCATGCTTTGGGATTTGGAACACAAGTTCATGCTTACACTATCAAAGCCA 1138
Query 1139 ATCTTGGCAATGATAGCTATGTGACTAACAGCTTGATTGACATGTATGCGAAATGTGATT 1198
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1139 ATCTTGGCAATGATAGCTATGTGACTAACAGCTTGATTGACATGTATGCGAAATGTGACT 1198
Query 1199 GTTTGACTGAGGCCAGAAAAGTTTTTGATATTTTCGCTGCTGATGATGTGGTTTTATTCA 1258
||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1199 GTTTGACCGATGCCAGAAAAGTTTTTGATATTTTCGCTGCTGCTGATGTGGTTTTATTCA 1258
Query 1259 ATGCAATGATTGAAGGTTACTCGAGACTTGGGACTCAATGGGAACTACATGACGCATTGA 1318
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1259 ATGCAATGATTGAAGGTTACTCGAGACTTGGGACACAATGGGAACTACATGAAGCATTGA 1318
Query 1319 ACATCTTTCATGATATGAGGTTCAGATTGATTCGACCTAGCCTATTGACTTTTGTTAGCC 1378
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1319 ACATCTTTCGTGACATGAGGTTCAGATTGATTCGACCTAGCCTATTGACTTTTGTTAGCC 1378
Query 1379 TTCTACGTGCATCTGCTTCTTTAACAAGCTTGGGACTGAGTAAACAAATCCATGGATTGA 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1379 TTCTACGTGCATCTGCTTCTTTAACAAGCTTGGGACTGAGTAAACAAATCCATGGATTGA 1438
Query 1439 TGTTCAAATTTGGGTTAAACTTGGATATATTTGCTGGAAGCGCTTTGATTGCTGTTTACT 1498
||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 1439 TGTTCAAATATGGGTTAAACTTAGATATATTTGCTGGAAGCGCTTTGATTGATGTTTACT 1498
Query 1499 CAAATTGCTACTGTCTCAAGGATTCTAGGCTTGTGTTTGATGAAATGAAAGAGAAAGATC 1558
||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct 1499 CAAATTGCTACTGCCTCAAGGATTCCAGGCTTGTGTTTGATGAAATGAAAGTGAAAGATC 1558
Query 1559 TTGTTATCTGGAATTCTATGTTTTCAGGTTATGTTCAACAATCAGAGAACGAAGAAGCTC 1618
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1559 TTGTTATCTGGAATTCTATGTTTGCAGGTTATGTTCAACAATCAGAGAACGAAGAAGCTC 1618
Query 1619 TCAACCTGTTTCTGGAATTACAGTTATCAAGAGACAGACCTGACGAATTCACTTTTGTGG 1678
|||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1619 TCAACCTGTTTCTGGAATTACAGTTATCAAGAGAAAGACCTGACGAATTCACGTTTGCCA 1678
Query 1679 ACATGGTTACAGCAGCTGGCAACCTAGCAAGTCTTCAATTGGGTCAAGAGTTCCATTGCC 1738
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1679 ACATGGTTACAGCAGCTGGCAACCTAGCAAGTGTTCAATTGGGTCAAGAGTTCCATTGCC 1738
Query 1739 AGCTCCTGAAAAGAGGCTTGGAATGTAATCCGTATATTACAAATGCTCTACTAGATATGT 1798
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1739 AGCTTCTGAAAAGAGGCTTGGAATGTAATCCGTATATTACAAATGCTCTACTAGATATGT 1798
Query 1799 ACGCCAAATGTGGTAGTCCCGAAGACGCTCATAAGGCTTTTGATTCAGCAGCTTCAAGAG 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1799 ACGCCAAATGTGGTAGTCCCGAAGACGCTCATAAGGCTTTTGATTCAGCAGCTTCAAGAG 1858
Query 1859 ATGTGGTTTGTTGGAATTCTGTCATCTCATCTTATGCGAATCATGGAGAAGGTAGAAAAG 1918
|||| ||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1859 ATGTAGTTTGTTGGAATTCTGTCATCTCATCTTATGCGAATCATGGAGAAGGCA-AAAAG 1917
Query 1919 -CTCTTCAAATGCTTGAAAAAATGATGTGTGAGGGAATAGAGCCTAACTACATCACCTTT 1977
||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1918 GCTCTTCAGATGCTTGAAAAAATGATGAGTGAGGGAATAGAGCCTAACTACATCACCTTT 1977
Query 1978 GTGGGAGTTCTATCAGCGTGTAGCCATGCTGGTCTTGTAGAAGATGGACTTAAGCAATTT 2037
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1978 GTTGGAGTTCTATCAGCGTGTAGCCATGCTGGTCTTGTAGAAGATGGACTTAAGCAATTT 2037
Query 2038 GAGTTAATGCTGCGATTTGGAATTGAACCTGAAACTGAGCACTATGTTTGTATGGTATCT 2097
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2038 GAGTTAATGCTTCGATTTGGAATTGAACCTGAAACTGAGCACTATGTTTGTATGGTATCT 2097
Query 2098 CTTTTAGGCCGTGCTGGTAGATTGAACGAAGCAAGGGAGTTAATTGAGAAAATGCCGACA 2157
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2098 CTTTTAGGCCGTGCTGGTAGATTGAACAAAGCAAGGGAGTTAATTGAGAAAATGCCGACA 2157
Query 2158 AAACCAGCTGCTATAGTATGGAGGAGCTTACTGAGCGGATGCGCAAAGGCCGGTAATGTC 2217
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||
Sbjct 2158 AAACCAGCTGCTATAGTATGGAGGAGCTTGCTGAGTGGATGCGCAAAGGCCGGTAACGTC 2217
Query 2218 GAGTTAGCTGAGTATGCTGCTGAAATGGCTATTTTGTCTGATCCAAAGGACAGTGGATCG 2277
||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2218 GAGTTAGCTGAACATGCTGCTGAAATGGCTATTTTGTCTGATCCCAAGGACAGTGGATCG 2277
Query 2278 TTTACTTTGCTTTCTAATATTTACGCGTCCAAGGGTATGTGGACTGATGCGAAGAAGGTA 2337
|||||| |||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2278 TTTACTATGCTTTCTAATATTTACGCGTCCAAGGGTATGTGGACTGAAGCTAAGAAGGTG 2337
Query 2338 AGAGAAAGAATGAAGTTTGAAGGTGTGGTGAAAGAACCTGGACATAGTTGGATTGAGATT 2397
||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 2338 AGAGAAAGAATGAAGGTTGAAGGTGTGGTGAAAGAACCTGGACGTAGTTGGATTGGGATT 2397
Query 2398 AATAAGGAGGTTCATATCTTTTTGTCTAAGGATAAATCTCACTGCAAGGCTAATCAAATT 2457
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2398 AATAAGGAGGTTCATATATTTTTGTCTAAGGATAAATCTCACTGCAAGGCTAATCAAATT 2457
Query 2458 TATGAAGTGTTAGACGACTTGCTTGTGCAGATCAGAGGA 2496
|||||||||||||||||||| ||||||||||||||||||
Sbjct 2458 TATGAAGTGTTAGACGACTTACTTGTGCAGATCAGAGGA 2496
> AT4G37680.1 | Symbols: HHP4 | heptahelical protein 4 | chr4:17700711-17702753
FORWARD LENGTH=1546
Length=1546
Score = 414 bits (224), Expect = 2e-114
Identities = 287/317 (91%), Gaps = 6/317 (2%)
Strand=Plus/Plus
Query 2860 TCGGGTTGTGAGGGCCT-TACTGTT-TTTGGAATGGGATTCTCTGAAGGAGCTCTGATTC 2917
|||||| |||||||| | | ||||| ||||||||||||||||||| ||||| |||||
Sbjct 1049 TCGGGTGGTGAGGGCGTCT-CTGTTCTTTGGAATGGGATTCTCTGGCTTAGCTCCGATTC 1107
Query 2918 TACATAAGCTGATCATGTTTTGGGATCAACCTGAAGCGCTTCACACAACAGGTTATGAGA 2977
| || |||||||| || |||||||| ||||||||||| |||||||| |||||||||||||
Sbjct 1108 TTCACAAGCTGATAATCTTTTGGGACCAACCTGAAGCCCTTCACACGACAGGTTATGAGA 1167
Query 2978 TTTTGATGGATTTGCTCTACGGGTTAGGAGCTTTGGTTTATGCAACTAGGATTCCAGAGA 3037
||||||||| |||||| || |||||||||||| ||||||||||||||||||| |||||||
Sbjct 1168 TTTTGATGGGTTTGCTTTATGGGTTAGGAGCTCTGGTTTATGCAACTAGGATCCCAGAGA 1227
Query 3038 GATGGATGCTGGGAAAATTCGATATAGCAGGACATAGCCATCAGTTGTTTCATGTTCTGG 3097
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1228 GATGGATGCCGGGTAAATTCGATATAGCAGGACATAGCCATCAGTTGTTTCATGTTCTGG 1287
Query 3098 TGGTTGCTGGTGCGTTCACCACACACTATAGAGCTGGGCTAGTGTATCTTAAGTGGAGAG 3157
| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct 1288 TTGTTGCTGGTGCGTTCACG-CAC--TATAGAGCTGGGCTAGTGTATCTTAAGTGGAGAG 1344
Query 3158 ACATTGAAGGATGTTGA 3174
| |||||||||||||||
Sbjct 1345 ATATTGAAGGATGTTGA 1361
> AT2G40710.1 | Symbols: | Haemolysin-III related integral membrane
protein | chr2:16980943-16981368 REVERSE LENGTH=426
Length=426
Score = 379 bits (205), Expect = 8e-104
Identities = 259/285 (91%), Gaps = 3/285 (1%)
Strand=Plus/Plus
Query 2890 ATGGGATTCTCTGAAGGAGCTCTGATTCTACATAAGCTGATCATGTTTTGGGATCAACCT 2949
||||||||||||| ||||| |||||| || |||||||| || |||||||| ||||||
Sbjct 1 ATGGGATTCTCTGGCTTAGCTCCGATTCTTCACAAGCTGATAATCTTTTGGGACCAACCT 60
Query 2950 GAAGCGCTTCACACAACAGGTTATGAGATTTTGATGGATTTGCTCTACGGGTTAGGAGCT 3009
||||| |||||||| ||| |||||||||||||||||| |||||| || ||||||||||||
Sbjct 61 GAAGCCCTTCACACGACATGTTATGAGATTTTGATGGGTTTGCTTTATGGGTTAGGAGCT 120
Query 3010 TTGGTTTATGCAACTAGGATTCCAGAGAGATGGATGCTGGGAAAATTCGATATAGCAGGA 3069
||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||
Sbjct 121 CTGGTTTATGCAACTAGGATCCCAGAGAGATGGATGCCGGGTAAATTCGATATAGCAGGA 180
Query 3070 CATAGCCATCAGTTGTTTCATGTTCTGGTGGTTGCTGGTGCGTTCACCACACACTATAGA 3129
||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||
Sbjct 181 CATAGCCATCAGTTGTTTCATGTTCTGGTAGTTGCTGGTGCGTTCACG-CAC--TATAGA 237
Query 3130 GCTGGGCTAGTGTATCTTAAGTGGAGAGACATTGAAGGATGTTGA 3174
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 238 GCTGGGCTAGTGTATCTTAAGTGGAGAGATATTGAAGGATGTTGA 282
> AT4G38320.1 | Symbols: HHP5 | heptahelical protein 5 | chr4:17948692-17950522
FORWARD LENGTH=1432
Length=1432
Score = 353 bits (191), Expect = 5e-96
Identities = 252/281 (90%), Gaps = 6/281 (2%)
Strand=Plus/Plus
Query 2860 TCGGGTTGTGAGGGCCT-TACTGTT-TTTGGAATGGGATTCTCTGAAGGAGCTCTGATTC 2917
|||||| |||||||| | | ||||| ||||||||||||||||||| ||||| |||||
Sbjct 1014 TCGGGTGGTGAGGGCGTCT-CTGTTCTTTGGAATGGGATTCTCTGGCTTAGCTCCGATTC 1072
Query 2918 TACATAAGCTGATCATGTTTTGGGATCAACCTGAAGCGCTTCACACAACAGGTTATGAGA 2977
| || ||||||||||| |||||||| ||||||||||| ||||||| |||||||||||||
Sbjct 1073 TTCACAAGCTGATCATCTTTTGGGACCAACCTGAAGCCCTTCACATGACAGGTTATGAGA 1132
Query 2978 TTTTGATGGATTTGCTCTACGGGTTAGGAGCTTTGGTTTATGCAACTAGGATTCCAGAGA 3037
||||||||| |||||| || |||||||||||| ||||||||||||||||||| |||||||
Sbjct 1133 TTTTGATGGGTTTGCTTTATGGGTTAGGAGCTGTGGTTTATGCAACTAGGATCCCAGAGA 1192
Query 3038 GATGGATGCTGGGAAAATTCGATATAGCAGGACATAGCCATCAGTTGTTTCATGTTCTGG 3097
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 GATGGATGCCGGGTAAATTCGATATAGCAGGACATAGCCATCAGTTGTTTCATGTTCTGG 1252
Query 3098 TGGTTGCTGGTGCGTTCACCACACACTATAGAGCTGGGCTA 3138
| |||||||||||||| | || ||||||||||||||||||
Sbjct 1253 TTGTTGCTGGTGCGTT-A--ACGCACTATAGAGCTGGGCTA 1290
> AT4G38290.1 | Symbols: | Haemolysin-III related integral membrane
protein | chr4:17942871-17944047 FORWARD LENGTH=465
Length=465
Score = 313 bits (169), Expect = 8e-84
Identities = 197/210 (94%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 2965 ACAGGTTATGAGATTTTGATGGATTTGCTCTACGGGTTAGGAGCTTTGGTTTATGCAACT 3024
|||||||||||||||||||||| |||||| || |||||||||||| ||||||||||||||
Sbjct 121 ACAGGTTATGAGATTTTGATGGGTTTGCTTTATGGGTTAGGAGCTCTGGTTTATGCAACT 180
Query 3025 AGGATTCCAGAGAGATGGATGCTGGGAAAATTCGATATAGCAGGACATAGCCATCAGTTG 3084
||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 181 AGGATCCCAGAGAGATGGATGCCGGGTAAATTCGATATAGCAGGACATAGCCATCAGTTG 240
Query 3085 TTTCATGTTCTGGTGGTTGCTGGTGCGTTCACCACACACTATAGAGCTGGGCTAGTGTAT 3144
|||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 241 TTTCATGTTCTGGTAGTTGCTGGTGCGTTCACG-CAC--TATAGAGCTGGGCTAGTGTAT 297
Query 3145 CTTAAGTGGAGAGACATTGAAGGATGTTGA 3174
|||||||||||||| |||||||||||||||
Sbjct 298 CTTAAGTGGAGAGATATTGAAGGATGTTGA 327
> AT4G40000.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein | chr4:18543893-18547523
REVERSE LENGTH=2528
Length=2528
Score = 193 bits (104), Expect = 1e-47
Identities = 130/142 (92%), Gaps = 3/142 (2%)
Strand=Plus/Minus
Query 2646 GTCTTTGAGAGTT-ATATCAGCTTCAAGCTGTCTCAGTAGTCTTCAAACAGTTCTCAGCT 2704
||||||||||||| | |||||||||||||||||||| |||||| |||||||||||||||
Sbjct 2455 GTCTTTGAGAGTTAACGTCAGCTTCAAGCTGTCTCAGCAGTCTTGAAACAGTTCTCAGCT 2396
Query 2705 ATTTCTACTTCTTTACTTCTATCAGAAAGTCTCTTGATAAGTTGGTGACAATCGACTGTT 2764
||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 2395 TTTTCTTTTTCTTTACTTCTATCAGAAAGCCTCTGGATAAGTTGGTGACAATCGACTGTT 2336
Query 2765 GTGACCATAACGGCTTTAAGCT 2786
||||||||||||| || |||||
Sbjct 2335 GTGACCATAACGG-TT-AAGCT 2316
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 157875369621
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5