BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg353194
Length=1092
Score E
Sequences producing significant alignments: (Bits) Value
AT4G36450.1 | Symbols: ATMPK14, MPK14 | mitogen-activated prote... 1712 0.0
AT2G18170.1 | Symbols: ATMPK7, MPK7 | MAP kinase 7 | chr2:79078... 1092 0.0
> AT4G36450.1 | Symbols: ATMPK14, MPK14 | mitogen-activated protein
kinase 14 | chr4:17210245-17211413 REVERSE LENGTH=1086
Length=1086
Score = 1712 bits (927), Expect = 0.0
Identities = 1043/1097 (95%), Gaps = 16/1097 (1%)
Strand=Plus/Plus
Query 1 ATGGCGATGCTAGTTGATCCTCCAAATGGGATTAGACAAGAAGGGAAACATTACTACACG 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1 ATGGCGATGCTAGTTGATCCTCCAAATGGGATAAGACAAGAAGGGAAACATTACTACACG 60
Query 61 ATGTGGCAAACATTATTCGAAATCGACACTAAGTATGTTCCGATTAAGCCGATTGGAAGA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 ATGTGGCAAACATTATTCGAAATCGACACTAAGTATGTTCCGATTAAGCCGATTGGAAGA 120
Query 121 GGAGCTTATGGTGTTGTTTGTTCTTCAATCAACAGAGAGACCAATGAGAGAGTTGCTATT 180
|||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||
Sbjct 121 GGAGCTTATGGTGTGGTTTGTTCTTCAATCAACAGCGAAACCAATGAGAGAGTTGCTATT 180
Query 181 AAGAAGATCCACAATGTGTTTGAGAATCGCATCGATGCTTTGAGAACGTTGAGAGAGCTT 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 181 AAGAAGATCCACAATGTGTTTGAGAATCGCATCGATGCTTTGAGAACATTGAGAGAGCTT 240
Query 241 AAGCTTTTAAGGCATGTGAGACACGAAAACGTTATCGCCCTTAAGGATGTTATGTTGCCT 300
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 241 AAGCTTTTAAGGCATGTGAGACACGAAAACGTTATCTCCCTTAAGGATGTTATGCTGCCT 300
Query 301 ACTCATAGGTACAGTTTCAAAGATGTTTATTTGGTCTATGAGCTTATGGATTCTGATTTG 360
||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 301 ACTCACAGGTACAGCTTCAGAGATGTTTATTTGGTCTATGAGCTTATGGATTCTGATTTG 360
Query 361 AATCAGATCATCAAATCTTCTCAGTCTCTTTCCGATGATCACTGCAAGTACTTCTTGTTT 420
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 361 AATCAGATCATCAAATCCTCTCAGTCTCTCTCCGATGATCACTGCAAGTACTTCTTGTTT 420
Query 421 CAGTTGCTAAGAGGATTGAAGTATCTTCACTCAGCAAACATCCTTCACCGCGATTTAAAG 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 421 CAGTTGCTAAGAGGATTGAAGTATCTTCACTCAGCAAACATCCTTCATCGCGATTTAAAG 480
Query 481 CCCGGGAATCTTCT-AGTGAATGCTAATTGTGATCTAAAGATTTGTGATTTCGGGCTTGC 539
|| |||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CCAGGGAATCT-CTTAGTGAATGCTAATTGTGATCTAAAGATTTGTGATTTCGGGCTTGC 539
Query 540 GAGAACAAGTAGAGGCAATGAACAGTTTATGACAGAGTATGTGGTCACACGTTGGTACCG 599
|||||| || |||||||||||||||||||||||||||||| |||||||||||
Sbjct 540 GAGAACT--TA-------TGAACAGTTTATGACAGAGTATGTGGTCACTCGTTGGTACCG 590
Query 600 AGCACCTGAGCTTCTTCTCTGTTGTGACAACTACGGAACCTCCATCGATGTTTGGTCGGT 659
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 591 AGCACCTGAGCTTCTTCTCTGTTGTGATAACTACGGAACCTCCATTGATGTTTGGTCGGT 650
Query 660 AGGATGCATATTTGCAGAGATTCTTGGAAGAAAACCGATTTTCCCGGGAACAGAATGCCT 719
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 651 AGGATGCATATTCGCAGAGATTCTTGGAAGAAAACCGATATTCCCGGGAACAGAATGTCT 710
Query 720 CAACCAACTGAAGCTAATCATAAATGTTGTTGGTAGCCAACAAGACTGGGATCTCCAGTT 779
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 CAACCAACTAAAGCTAATCATAAATGTTGTTGGTAGCCAACAAGACTGGGATCTCCAGTT 770
Query 780 CATAGATAACCAGAAAGCTAGGAGATTTATAAAGTCTCTTCCTTTCTCAAAGGGCACTCA 839
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 771 CATAGATAACCAGAAAGCTAGGAGATTTATAAAGTCTCTTCCTTTCTCAAAGGGTACTCA 830
Query 840 CTTTTCTCAGATTTACCCGCATGCGAATCCTCTGGCGATAGATTTGTTACAGAGGATGCT 899
||||||||| ||||||||||| || ||||| |||||||||||||||||||||||||||||
Sbjct 831 CTTTTCTCATATTTACCCGCACGCAAATCCGCTGGCGATAGATTTGTTACAGAGGATGCT 890
Query 900 TGTGTTTGATCCAACCAAGAGGATATCGGTCAGCGATGCGCTTTTACATCCCTACATGGC 959
||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 891 TGTGTTTGATCCAACCAAGAGAATATCGGTCAGCGATGCGCTTTTACACCCCTACATGGA 950
Query 960 GGGTTTGTTGGAACCGGAATGTAATCCGTCAGAAAATGTTCCGGTCAGT--TT-GGAGAT 1016
||| ||||||||||||||||||| ||||| |||||||||||||||||| || ||||||
Sbjct 951 GGGACTGTTGGAACCGGAATGTAACCCGTCGGAAAATGTTCCGGTCAGTAGTTTGGAGAT 1010
Query 1017 AGATGAGAATATGGAAGGAGACATGATCAGGGAGATGATGTGGGAAGAGATGCTTTATTA 1076
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct 1011 AGATGAGAACATGGAAGGAGATATGATCAGGGAGATGATGTGGGAAGAGATGCTTCATTA 1070
Query 1077 CCTTCCC-GAAGCTTAA 1092
||| ||| || ||||||
Sbjct 1071 CCTCCCCCGA-GCTTAA 1086
> AT2G18170.1 | Symbols: ATMPK7, MPK7 | MAP kinase 7 | chr2:7907804-7909923
REVERSE LENGTH=1695
Length=1695
Score = 1092 bits (591), Expect = 0.0
Identities = 939/1105 (85%), Gaps = 32/1105 (3%)
Strand=Plus/Plus
Query 1 ATGGCGATGCTAGTTGATCCTCCAAATGGGATT-AGACAAGAAGGGAAACATTACTACAC 59
||||||||| ||||||| || |||||||||||| || ||| ||||||||||||||||| |
Sbjct 215 ATGGCGATGTTAGTTGAGCCACCAAATGGGATTAAG-CAACAAGGGAAACATTACTACTC 273
Query 60 GATGTGGCAAACATTATTCGAAATCGACACTAAGTATGTTCCGATTAAGCCGATTGGAAG 119
|||||||||||||| ||||||||||| || ||||||||||||||||| || ||||||||
Sbjct 274 CATGTGGCAAACATTGTTCGAAATCGATACAAAGTATGTTCCGATTAAACCCATTGGAAG 333
Query 120 AGGAGCTTATGGTGTTGTTTGTTCTTCAATCAA-CAGAGAGACCAATGAGAGAGTTGCTA 178
||||||||||||||| ||||||||||| ||||| | | ||||| ||||||||||||||||
Sbjct 334 AGGAGCTTATGGTGTGGTTTGTTCTTCTATCAATC-GTGAGACTAATGAGAGAGTTGCTA 392
Query 179 TTAAGAAGATCCACAATGTGTTTGAGAATCGCATCGATGCTTTGAGAACGTTGAGAGAGC 238
|||| ||||| |||||||||||||||||||| | |||||||||||||||||||| || |
Sbjct 393 TTAAAAAGATTCACAATGTGTTTGAGAATCGTGTTGATGCTTTGAGAACGTTGAGGGAAC 452
Query 239 TTAAGCTT-TTAAGGCATGTGAGACACGAAAACGTTATCGCCCTTAAGGATGTTATGTTG 297
|||| ||| || ||||||||||| || || || || ||||| ||||| ||||||||||||
Sbjct 453 TTAAACTTCTT-AGGCATGTGAGGCATGAGAATGTGATCGCGCTTAAAGATGTTATGTTG 511
Query 298 CCTACTCATAGGTACAGTTTCAAAGATGTTTATTTGGTCTATGAGCTTATGGATTCTGAT 357
||| || |||| | ||||||||| |||||||||||||| |||||||| |||||| |||||
Sbjct 512 CCTGCTAATAGATCCAGTTTCAAGGATGTTTATTTGGTTTATGAGCTAATGGATACTGAT 571
Query 358 -TTGAATCAGATCATCAAATCTTCTCAGTCTCTTTCCGATGATCACTGCAAGTACTTCTT 416
|| ||||||| || ||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 572 CTT-CATCAGATTATTAAATCCTCTCAGTCTCTTTCTGATGATCACTGCAAGTACTTCTT 630
Query 417 GTTTCAGTTGCTAAGAGGATTGAAGTATCTTCACTCAGCAAACATCCTTCACCGCGATTT 476
|||||||||||| ||||| |||||||||||||| || |||||||| |||||||| |||||
Sbjct 631 GTTTCAGTTGCTTAGAGGGTTGAAGTATCTTCATTCTGCAAACATACTTCACCGGGATTT 690
Query 477 AAAGCCCGGGAATCTTC-TAGTGAATGCTAATTGTGATCTAAAGATTTGTGATTTCGGGC 535
||||||||||| | || |||| ||||| || || ||||| ||||||||||||||||||
Sbjct 691 GAAGCCCGGGAA-CCTCTTAGTTAATGCGAACTGCGATCTCAAGATTTGTGATTTCGGG- 748
Query 536 TT-GCGAGAACAAG-TAGAGGCAATGAACAGTTTATGACAGAGTATGTGGTCACACGTTG 593
|| |||||||| || | ||| ||||||||||| ||||| ||||||||||| ||||||||
Sbjct 749 TTGGCGAGAACGAGCCA-AGGTAATGAACAGTTCATGACTGAGTATGTGGTTACACGTTG 807
Query 594 GTACCGAGCACCTGAGCTTCTTCTCTGTTGTGACAACTACGGAACCTCCATCGATGTTTG 653
|||| ||||||||||||||||||| |||||||| ||||| ||||||||||| ||||| ||
Sbjct 808 GTACAGAGCACCTGAGCTTCTTCTTTGTTGTGATAACTATGGAACCTCCATTGATGTATG 867
Query 654 GTCGGTAGGATGCATATTTGCAGAGATTCTTGGAAGAAAACCGATTTTCCCGGGAACAGA 713
|||||| || |||||||| || ||||||||||| || ||||||||||| || ||||||||
Sbjct 868 GTCGGTTGGTTGCATATTCGCGGAGATTCTTGGTAGGAAACCGATTTTTCCAGGAACAGA 927
Query 714 ATGCCTCAACCAACTGAAGCTAATCATAAATGTTGTTGGTAGCCAACAAGACTGGGATCT 773
|||| | || || || ||||||||||| || |||||||||||||||||||| | ||| |
Sbjct 928 ATGCTTGAATCAGCTTAAGCTAATCATCAACGTTGTTGGTAGCCAACAAGAATCTGATAT 987
Query 774 CCAGTTCATAGATAACCAGAAAGCTAGGAGATTTATAAAGTCTCTTCCTTTCTCAAAG-G 832
| ||||||||| |||| ||||||| | || ||||||||||||||||| | ||| ||| |
Sbjct 988 TCGGTTCATAGACAACCCGAAAGCTCGAAGGTTTATAAAGTCTCTTCCGTACTC-AAGAG 1046
Query 833 GCACTCACTTTTCT-C-AGATTTACCCGCATGCGAATCCTCTGGCGATAGATTTGTTACA 890
| ||||| | ||| | | |||| || || || |||||||| || ||||||||||||||
Sbjct 1047 GAACTCA--TCTCTCCAATCTTTATCCACAAGCCAATCCTCTAGCTATAGATTTGTTACA 1104
Query 891 GAGGATGCTTGTGTTTGATCCAACCAAGAGGATATCGGTCAGCGATGCGCTTTTACATCC 950
|||||||||||||||||||||||||||||| || || || | ||||||||| ||||| ||
Sbjct 1105 GAGGATGCTTGTGTTTGATCCAACCAAGAGAATCTCTGTAACCGATGCGCTCTTACA-CC 1163
Query 951 C-TACATGGCGGGTTTGTTGGAACC-GGAATGTAATCCGTCAGAAAATGTTCCGGTCAGT 1008
| || |||||||| ||||| || || ||| | |||||| | | | |||| || || |
Sbjct 1164 CGTATATGGCGGGGTTGTTTGATCCTGGA-TCCAATCCGCCTGCACATGTCCCAATCTCT 1222
Query 1009 TTGGAGATAGATGAGAATATGGAAGGAGAC-A-TGATCAGGGAGATGATGTGGGAA-GAG 1065
|||| |||||||| || ||||| ||| || | |||| || |||||||||||| || |||
Sbjct 1223 CTGGACATAGATGAAAACATGGA-GGA-ACCAGTGATAAGAGAGATGATGTGG-AATGAG 1279
Query 1066 ATGCTTTATTACCTTCCC-GAAGCT 1089
||||||||||||| ||| ||||||
Sbjct 1280 ATGCTTTATTACCA-CCCTGAAGCT 1303
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53513780970
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5