BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg353449
Length=1713
Score E
Sequences producing significant alignments: (Bits) Value
AT4G33820.1 | Symbols: | Glycosyl hydrolase superfamily protei... 2579 0.0
AT4G33810.1 | Symbols: | Glycosyl hydrolase superfamily protei... 2004 0.0
> AT4G33820.1 | Symbols: | Glycosyl hydrolase superfamily protein
| chr4:16217004-16219525 REVERSE LENGTH=1729
Length=1729
Score = 2579 bits (1396), Expect = 0.0
Identities = 1611/1716 (94%), Gaps = 10/1716 (1%)
Strand=Plus/Plus
Query 1 ATGAACAGTATCAAGAATGGCTTCTTCCTCTGCATGCTTTCTCTTCTCTGGTGTCTTGTG 60
|||||||| ||||||||||||||||||||||||||| ||| |||||||||||| | ||||
Sbjct 11 ATGAACAGCATCAAGAATGGCTTCTTCCTCTGCATGATTTTTCTTCTCTGGTGCCATGTG 70
Query 61 GATTCACGGATTTCCACT-GATCCTTTCTCCCATAGCCACTCTCTCAATACAGAGTGTGT 119
|||||| || |||||| | ||||||||||||||||||||||||||||| |||||||||||
Sbjct 71 GATTCAGGGGTTTCCA-TCGATCCTTTCTCCCATAGCCACTCTCTCAACACAGAGTGTGT 129
Query 120 AATGAAGCCTCCACAAAGCAGTGAAACGCAAGGATTATTACAATTTAGCCGCTCTGTTGA 179
||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||
Sbjct 130 GATGAAGCCTCCACGAAGCAGTGAAACGAAAGGATTATTACAATTTAGCCGCTCTCTCGA 189
Query 180 AGCTGACTCTGGTGAAGAATGGAAAATAGATGGAAATGGAGCCATTAGAGAAATGGCACA 239
|| |||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 190 AGATGACTCTGATGAAGAATGGAAAATTGATGGAAATGGATTCATTAGAGAAATGGCACA 249
Query 240 GAGAATTCAGCTTCACCAAGGAAACATTTATAGCTTCTCTGCTTGTGTGAAATTGAGAGA 299
|||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||
Sbjct 250 GAGAATTCAGCTTCACCAAGGAAATATTTACAGCTTCTCTGCTTGGGTGAAATTGAGAGA 309
Query 300 AGGAAACGACAAGAAAGTAGGAGTTGTGTTCAGGACAGAAAATGGAAGACTTGTTCATGG 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 310 AGGAAACGACAAGAAAGTAGGAGTTGTGTTCAGGACAGAAAATGGAAGACTTGTTCATGG 369
Query 360 AGGTGAAGTTAGGGCAAAGCAAGGATGTTGGACTTTGCTTAAAGGTGGCATTGTACCAGA 419
|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 370 AGGTGAAGTTAGGGCAAATCAAGAATGTTGGACTTTGCTTAAAGGTGGCATTGTACCAGA 429
Query 420 TTTTTCAGGCCCTGTAGATATATTCTTCGAGAGCGAAAACAGAGAAGCAAAGATCTCTGC 479
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 430 TTTTTCAGGCCCTGTAGATATATTCTTCGAGAGTGAAAACAGAGGAGCAAAGATCTCTGC 489
Query 480 AAACAATGTGTTGCTGAAACAGTTTAGCAAAGACGAATGGAAACTGAAACAAGACCAACT 539
| ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 490 ACACAATGTGTTGCTAAAACAGTTTAGCAAAGAAGAATGGAAACTGAAACAGGACCAACT 549
Query 540 TATTGAAAAGATAAGGAAGAGCAAAGTGAGATTTGAAGTAACTTATCAGAACAAAACCGC 599
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 550 TATTGAAAAGATAAGGAAGAGCAAAGTGAGATTTGAAGTAACTTATGAGAACAAAACCGC 609
Query 600 GGTAAAAGGCGCAGTGATATCCCTAAAACAAACCAAATCATCTTTCCTCTTAGGCTGTGG 659
|||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 610 AGTAAAAGGCGTAGTGATATCACTAAAACAAACCAAATCATCTTTTCTCTTAGGCTGTGG 669
Query 660 AATGAATTTCCGGATCCTACAAAGCCAAGGTTACAGAAAATGGTTTGCGTCGCGGTTCAA 719
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 670 AATGAATTTCCGGATCCTACAAAGCCAAGGGTACAGAAAATGGTTTGCGTCGCGGTTCAA 729
Query 720 AATCACATCATTCACTAATGAAATGAAATGGTATGCAACGGAAAAAGCACGTGGTCAAGA 779
|||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 730 AATCACTTCATTCACTAATGAAATGAAATGGTATGCAACGGAGAAAGCACGAGGTCAAGA 789
Query 780 GAATTACACGGTAGCCGATTCAATGTTGAAATTTGCGGAAGATAATGGGATATTGGTTAG 839
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 790 GAACTACACGGTAGCCGATTCAATGCTGAAATTTGCGGAAGATAATGGGATATTGGTTAG 849
Query 840 AGGTCATACGGTGTTATGGGACAACCCAAGAATGCAGCCTAGTTGGGTGAAAAAGATAAA 899
||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 850 AGGTCATACAGTGTTATGGGACAACCCAAAAATGCAGCCTAGTTGGGTGAAAAATATAAA 909
Query 900 CA-ATCCGGAA-GATGTGATGAACGTGACATTGAACCGCATAAACTCGGTTATGAAGAGA 957
| |||| ||| |||||||||||||||||||||||| | || ||||||||||||||||||
Sbjct 910 -AGATCC-GAACGATGTGATGAACGTGACATTGAACAGGATCAACTCGGTTATGAAGAGA 967
Query 958 TACAAAGGGAAGTTAACCGGGTGGGATGTGGTTAACGAGAATCTGCATTGGGATTACTTT 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 968 TACAAAGGGAAGTTAACCGGGTGGGATGTGGTTAACGAGAATCTGCATTGGGATTACTTT 1027
Query 1018 GAGAAAATGCTTGGTGAAAATGCTTC-ATCACGTTTCTACAATCTGGCTTCTAAGATTGA 1076
|||||||||||||||| ||| ||||| | || |||||||||||||||||| |||||||||
Sbjct 1028 GAGAAAATGCTTGGTGCAAACGCTTCGA-CAAGTTTCTACAATCTGGCTTTTAAGATTGA 1086
Query 1077 TCCTGATGTAAGATTGTTTGTTAACGAGTACAACACGATAGAAAACCCTAAAGAGTTTAC 1136
||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 1087 TCCTGATGTGAGATTGTTTGTTAACGAGTACAATACGATAGAAAACACTAAAGAGTTTAC 1146
Query 1137 TGCGACGCCGATAAAGGTGAAGAAGAAGATGGAGGAGATTCTTGCGTACCCAGGAAACAA 1196
|||||||||||||||||||||||||| ||||||||| ||||| || || |||||||||||
Sbjct 1147 TGCGACGCCGATAAAGGTGAAGAAGATGATGGAGGAAATTCTCGCCTATCCAGGAAACAA 1206
Query 1197 GAACATTAAAGGAGCAATTGGAGCTCAGGGTCACTTTGGTCCAACTCAGCCTAACTTACC 1256
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1207 GAACATGAAAGGAGCAATTGGAGCTCAGGGTCACTTTGGTCCAACTCAGCCTAACTTAGC 1266
Query 1257 TTACATAAGATCTGCATTGGATACTTTAGGCTCACTACGTTTTCCTATTTGGCTTACAGA 1316
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 1267 TTACATAAGATCTGCATTGGATACTTTAGGCTCACTAGGTTTGCCTATTTGGCTTACAGA 1326
Query 1317 GCTTGATATACCTAAATGCCCTAATCAGGCGAAATACATGGAAGACATTCTCAGGGAAGC 1376
| ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1327 GGTTGATATGCCTAAATGCCCTAATCAGGCGCAATACGTGGAAGACATTCTCAGGGAAGC 1386
Query 1377 TTATTCGCATCCTGCGGTGAAAGGCATCATAATATTCGGTGGACCTGAGGTCTCTGGTTT 1436
||| |||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct 1387 TTACTCGCATCCTGCGGTGAAAGGTATCATAATATTTGGTGGACCTGAGGTGTCTGGTTT 1446
Query 1437 CGACAAGCTGACACTTGCGGACAAAAACTTCAACAACACACAAACTGGAGATGTAATTGA 1496
||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||
Sbjct 1447 TGACAAGCTGACACTTGCAGACAAAGACTTCAACAACACACAAACGGGAGATGTAATTGA 1506
Query 1497 TAAGTTACTCAAGGAGTGGCAACAAAAATCTTCAGAGATTCGAACGATTTTCACAGCAGA 1556
|||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1507 TAAGTTGCTCAAGGAGTGGCAACAAAAATCTTCAGAGATTCAAACGAATTTCACAGCAGA 1566
Query 1557 TTCCGGTAATGAAGAAGAAGAGATCTCATTGCTGCATGGACATTACAATGTGAATGTAAG 1616
||| | ||||||||| |||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct 1567 TTCTGATAATGAAGAGGAAGAGGTCTCATTGTTGCATGGACATTATAATGTGAATGTAAG 1626
Query 1617 TCATCCATGGATAGAAAATCTGTCCAACAGTTTCAGCTTGGAGGTAACTAAGGAGATGGG 1676
||||||||||||| ||| || |||| ||||||||||||||||||||||||||||||||
Sbjct 1627 CCATCCATGGATAGCAAACCTATCCACCAGTTTCAGCTTGGAGGTAACTAAGGAGATGGA 1686
Query 1677 TCA-GCATCAGGTGGTTAGAGTTGGATTTAATGCTT 1711
||| | | |||||| ||||||| | | ||| |||||
Sbjct 1687 TCAAG-ACCAGGTGATTAGAGTCGTAATTAGTGCTT 1721
> AT4G33810.1 | Symbols: | Glycosyl hydrolase superfamily protein
| chr4:16213324-16215594 REVERSE LENGTH=1590
Length=1590
Score = 2004 bits (1085), Expect = 0.0
Identities = 1434/1602 (90%), Gaps = 25/1602 (2%)
Strand=Plus/Plus
Query 121 ATGAAGCCTCCACAAAGCAGTGAAACGCAAGGATTATTACAATTTAGCCGCTCTGTTGAA 180
||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||
Sbjct 1 ATGAAGCCTCCACGAAGCAGTGAAACGAAAGGATTATTACAATTTAGCCGCTCTGTCGAA 60
Query 181 GCTGACTCTGGTGAAGAATGGAAAATAGATGGAAATGGAGCCATTAGAGAAATGGCACAG 240
| |||||||| ||||||||||||||||||||||| |||| |||| ||||||||| |||||
Sbjct 61 GATGACTCTGATGAAGAATGGAAAATAGATGGAAGTGGATCCATAAGAGAAATGACACAG 120
Query 241 AGAATTCAGCTTCACCAAGGAAACATTTATAGCTTCTCTGCTTGTGTGAAATTGAGAGAA 300
||||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||
Sbjct 121 AGAATTCAGCTTCACGAAGGAAACATTTACAGCTTCTCTGCTTGGGTGAAGTTGAGAGAA 180
Query 301 GGAAACGACAAGAAAGTAGGAGTTGTGTTCAGGACAGAAAATGGAAGACTTGTTCATGGA 360
|||||| | |||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 181 GGAAACAATAAGAAAGTAGGAGTTGTGTTTAGGACAGAAAATGGAAGATTTGTTCATGGA 240
Query 361 GGTGAAGTTAGGGCAAAGCAAGGATGTTGGACTTTGCTTAAAGGTGGCATTGTACCAGAT 420
|||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||
Sbjct 241 GGTGAAGTTAGGGCAAAGAAAAGATGTTGGACTTTGCTTAAAGGTGGCATTGTGCCAGAT 300
Query 421 TTTTCAGGCCCTGTAGATATATTCTTCGAGAGCGAAAACAGAGAAGCAAAGATCTCTGCA 480
|||||||| |||||||||| ||||||||||| || ||| |||||||||||| ||||||
Sbjct 301 GTTTCAGGCTCTGTAGATATTTTCTTCGAGAGTGATGACAAAGAAGCAAAGATTTCTGCA 360
Query 481 AACAATGTGTTGCTGAAACAGTTTAGCAAAGACGAATGGAAACTGAAACAAGACCAACTT 540
| | |||||| ||||||||||| || ||| | ||||||||||||||||||||||||||
Sbjct 361 AGCGATGTGTCCCTGAAACAGTTCAGTAAACAAGAATGGAAACTGAAACAAGACCAACTA 420
Query 541 ATTGAAAAGATAAGGAAGAGCAAAGTGAGATTTGAAGTAACTTATCAGAACAAAACCGCG 600
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 421 ATTGAAAAGATAAGGAAGAGCAAGGTGAGATTTGAAGTAACTTATCAGAACAAAACTGCG 480
Query 601 GTAAAAGGCGCAGTGATATCCCTAAAACAAACCAAATCATCTTTCCTCTTAGGCTGTGGA 660
|||||||||||||||||||| || ||||||||||| |||||||||| |||||||| | |
Sbjct 481 GTAAAAGGCGCAGTGATATCTATAGAACAAACCAAACCATCTTTCCTATTAGGCTGCGCA 540
Query 661 ATGAATTTCCGGATCCTACAAAGCCAAGGTTACAGAAAATGGTTTGCGTCGCGGTTCAAA 720
|||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| |||
Sbjct 541 ATGAATTTCCGGATCCTACAAAGCGAAGGGTACAGAAATTGGTTTGCGTCGCGGTTTAAA 600
Query 721 ATCACATCATTCACTAATGAAATGAAATGGTATGCAACGGAAAAAGCACGTGGTCAAGAG 780
|||||||| ||||| |||||||||||||||||| ||||||| |||| ||||||||| |||
Sbjct 601 ATCACATCCTTCACCAATGAAATGAAATGGTATACAACGGAGAAAGAACGTGGTCACGAG 660
Query 781 AATTACACGGTAGCCGATTCAATGTTGAAATTTGCGGAAGATAATGGGATATTGGTTAGA 840
|| ||||||| ||| ||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct 661 AACTACACGGCAGCTGATTCAATGTTAAAATTTGCGGAAGAGAATGGAATATTGGTTAGA 720
Query 841 GGTCATACGGTGTTATGGGACAACCCAAGAATGCAGCCTAGTTGGGTG-AAAAAGATA-A 898
|||||||| ||||| ||||| |||| ||||||||| | ||||||| |||| ||| |
Sbjct 721 GGTCATACTGTGTTGTGGGATGACCCTTTAATGCAGCCAACTTGGGTGCCAAAA-ATAGA 779
Query 899 ACAATCCGGAA-GATGTGATGAACGTGACATTGAACCGCATAAACTCGGTTATGAAGAGA 957
| |||| || ||| ||||||| |||||||||||||| |||||||||||||||| ||||
Sbjct 780 A-GATCC-AAACGATTTGATGAATGTGACATTGAACCGGATAAACTCGGTTATGACGAGA 837
Query 958 TACAAAGGGAAGTTAACCGGGTGGGATGTGGTTAACGAGAATC-TGCATTGGGATTACTT 1016
|||||||||||||||||||||||||| |||||||| ||||| | ||||||||||||||||
Sbjct 838 TACAAAGGGAAGTTAACCGGGTGGGACGTGGTTAATGAGAA-CGTGCATTGGGATTACTT 896
Query 1017 TGAGAAAATGCTTGGTGAAAATGCTTCATCACGTTTCTACAATCTGGCTTCTAAGATTGA 1076
||||||||||||||||| || ||||| ||| ||||||||||| |||||| |||| ||||
Sbjct 897 TGAGAAAATGCTTGGTGCCAACGCTTCGTCAAGTTTCTACAATTTGGCTTTTAAGCTTGA 956
Query 1077 TCCTGATGTAAGATTGTTTGTTAACGAGTACAACACGATAGAAAACCCTAAAGAGTTTAC 1136
||||||||| | | |||| ||||||||||||||||||||||| |||| | |||| ||||
Sbjct 957 TCCTGATGTGACAATGTTCGTTAACGAGTACAACACGATAGAGAACCGTGTAGAGGTTAC 1016
Query 1137 TGCGACGCCGATAAAGGTGAAGAAGAAGATGGAGGAGATTCTTGCGTACCCAGGAAACAA 1196
||||||||| | ||||||||| |||||||||||||||||||||| |||||||| ||||
Sbjct 1017 CGCGACGCCGGTTAAGGTGAAGGAGAAGATGGAGGAGATTCTTGCTTACCCAGGTAACAT 1076
Query 1197 GAACATTAAAGGAGCAATTGGAGCTCAGGGTCACTTTGGTCCAACTCAGCCTAACTTACC 1256
||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||| |
Sbjct 1077 GAACATTAAAGGAGCTATTGGAGCTCAAGGTCACTTTCGTCCAACTCAGCCTAACTTAGC 1136
Query 1257 TTACATAAGATCTGCATTGGATACTTTAGGCTCACTACGTTTTCCTATTTGGCTTACAGA 1316
|||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||||
Sbjct 1137 TTACATGAGATCTGCATTGGATACTTTAGGCTCACTAGGTTTGCCTATCTGGCTTACAGA 1196
Query 1317 GCTTGATATACCTAAATGCCCTAATCAGGCGAAATACATGGAAGACATTCTCAGGGAAGC 1376
| ||||||| ||||| ||||||||||||| | |||||| ||||| ||| | ||||||||
Sbjct 1197 GGTTGATATGCCTAAGTGCCCTAATCAGGAGGTATACATTGAAGAAATTTTGAGGGAAGC 1256
Query 1377 TTATTCGCATCCTGCGGTGAAAGGCATCATAATATTCGGTGGACCTGAGGTCTCTGGTTT 1436
||||||||||||||||| ||||||||||||||||| | ||| |||||||| ||||||||
Sbjct 1257 GTATTCGCATCCTGCGGTTAAAGGCATCATAATATTTGCTGGGCCTGAGGTGTCTGGTTT 1316
Query 1437 CGACAAGCTGACACTTGCGGACAAAAACTTCAACAACAC-ACAAACTGGAGATGTAATTG 1495
||||||||||||||||||||||||| ||||||||||||| | ||| |||||||||||||
Sbjct 1317 CGACAAGCTGACACTTGCGGACAAATACTTCAACAACACTGC-AACAGGAGATGTAATTG 1375
Query 1496 ATAAGTTACTCAAGGAGTGGCAACAAAAATCTTCAGAGATT-CGAACGATTTTCACAG-C 1553
| ||||| |||||||||||||| | |||||||||||||| | || |||||||| | |
Sbjct 1376 ACAAGTTGCTCAAGGAGTGGCAGC---AATCTTCAGAGATTCCCAA-GATTTTCA-TGAC 1430
Query 1554 AGATTCCG-GTAATGAAGAAGAAGAGATCTCATTGCTGCATGGACATTACAATGTGAATG 1612
||||||| | ||||| ||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 1431 GGATTCCGAG-AATGATGAAGAAGAGGTCTCATTGTTGCATGGACATTACAATGTGAATG 1489
Query 1613 TAAGTCATCCATGGATAGAA-AATC-TGTCCAAC-AGTTTCAGCTTGGAGGTAACTAAGG 1669
|||||||||||||||| ||| || | |||| ||| |||||||||||||||||||||||||
Sbjct 1490 TAAGTCATCCATGGAT-GAAGAA-CATGTC-AACCAGTTTCAGCTTGGAGGTAACTAAGG 1546
Query 1670 AGATGGGTCAGCATCAGGTGGTTAGAGTTGGATTTAATGCTT 1711
|||||||||||| ||||||||||||||||| | |||||||||
Sbjct 1547 AGATGGGTCAGCGTCAGGTGGTTAGAGTTGTAATTAATGCTT 1588
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84688319415
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5