BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg353450
Length=1707
Score E
Sequences producing significant alignments: (Bits) Value
AT4G33810.1 | Symbols: | Glycosyl hydrolase superfamily protei... 2529 0.0
AT4G33820.1 | Symbols: | Glycosyl hydrolase superfamily protei... 2100 0.0
> AT4G33810.1 | Symbols: | Glycosyl hydrolase superfamily protein
| chr4:16213324-16215594 REVERSE LENGTH=1590
Length=1590
Score = 2529 bits (1369), Expect = 0.0
Identities = 1519/1592 (95%), Gaps = 7/1592 (0%)
Strand=Plus/Plus
Query 121 ATGAAGCCTCCACGAAGCAGTGAAACGCAAGGATTATTACAATTTAGCCGTTCTGTCGAA 180
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 1 ATGAAGCCTCCACGAAGCAGTGAAACGAAAGGATTATTACAATTTAGCCGCTCTGTCGAA 60
Query 181 GCTGACTCTGATGAAGAATGGAAAATAGATGAAAATGGATCCATTAGAGAAATGACACAG 240
| ||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||
Sbjct 61 GATGACTCTGATGAAGAATGGAAAATAGATGGAAGTGGATCCATAAGAGAAATGACACAG 120
Query 241 AGAATTCAGCTTCAAC-AAGGAAACATCTACAGCTTCTCCGCTTGGGTGAAGTTGAGAGA 299
||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 121 AGAATTCAGCTTC-ACGAAGGAAACATTTACAGCTTCTCTGCTTGGGTGAAGTTGAGAGA 179
Query 300 AGGAAACAAGAAGAAAGTAGGAGTTGTATTCAGGACAGAAAATGG-AG--TTGTTCATGG 356
||||||||| ||||||||||||||||| || |||||||||||||| || ||||||||||
Sbjct 180 AGGAAACAATAAGAAAGTAGGAGTTGTGTTTAGGACAGAAAATGGAAGATTTGTTCATGG 239
Query 357 AGGTGAAGTTAGGGCAAAGCAAGGATGTTGGACTTTACTTAAAGGTGGCATTGTGCCAGA 416
||||||||||||||||||| || ||||||||||||| |||||||||||||||||||||||
Sbjct 240 AGGTGAAGTTAGGGCAAAGAAAAGATGTTGGACTTTGCTTAAAGGTGGCATTGTGCCAGA 299
Query 417 TTTTTCAGGCTCTGTAGATATTTTCTTCGAGACTGATGACAAAGAAGCAAAGATTTCTGC 476
| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 300 TGTTTCAGGCTCTGTAGATATTTTCTTCGAGAGTGATGACAAAGAAGCAAAGATTTCTGC 359
Query 477 AAGCGATGTGTCGCTGAAACAGTTCAGCAAAGAAGAATGGAAACTGAAACAAGACCGACT 536
|||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||
Sbjct 360 AAGCGATGTGTCCCTGAAACAGTTCAGTAAACAAGAATGGAAACTGAAACAAGACCAACT 419
Query 537 TATTGAAAAGATAAGGAAGAGCAAAGTGAGATTTGAAGTAACTTATCAGAACAAAACTGC 596
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 420 AATTGAAAAGATAAGGAAGAGCAAGGTGAGATTTGAAGTAACTTATCAGAACAAAACTGC 479
Query 597 GGTAAAAGGCGCAGTGATATCCATAGAACAAACCAAACCATCTTTCCTCTTAGGGTGCGC 656
||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||
Sbjct 480 GGTAAAAGGCGCAGTGATATCTATAGAACAAACCAAACCATCTTTCCTATTAGGCTGCGC 539
Query 657 AATGAATTTCCGGATCCTACAAAGCGAAGGGTACAGAAATTGGTTTGCGTCGCGGTTTAA 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 AATGAATTTCCGGATCCTACAAAGCGAAGGGTACAGAAATTGGTTTGCGTCGCGGTTTAA 599
Query 717 AATCACATCCTTCACCAATGAAATGAAATGGTATACAACGGAGAAAGAACGTGGTCAAGA 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 600 AATCACATCCTTCACCAATGAAATGAAATGGTATACAACGGAGAAAGAACGTGGTCACGA 659
Query 777 GAACTACACGGCAGCTGACTCAATGCTGAAATTTGCGGAAGAGAATGGAATATTGGTTAG 836
|||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||
Sbjct 660 GAACTACACGGCAGCTGATTCAATGTTAAAATTTGCGGAAGAGAATGGAATATTGGTTAG 719
Query 837 AGGTCATACTGTGCTGTGGGACGACCCAATAATGCAACCAAGTTGGGTACAAAAAATAAA 896
||||||||||||| ||||||| ||||| ||||||| |||| |||||| | ||||||| |
Sbjct 720 AGGTCATACTGTGTTGTGGGATGACCCTTTAATGCAGCCAACTTGGGTGCCAAAAATAGA 779
Query 897 AGACCCAAATGATTTGATGAACGTGACATTGAACCGGATAAACTCGGTAATGACGAGATA 956
||| ||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 780 AGATCCAAACGATTTGATGAATGTGACATTGAACCGGATAAACTCGGTTATGACGAGATA 839
Query 957 CAAAGGGAAGTTAACCGGGTGGGATGTGGTTAATGAGAACGTGCACTGGGATTACTTTGA 1016
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 840 CAAAGGGAAGTTAACCGGGTGGGACGTGGTTAATGAGAACGTGCATTGGGATTACTTTGA 899
Query 1017 GAAAATGCTTGGTGCAAACGCTTCGTCAAGTTTCTACAATTTGGCTTTTAAGCTAGATCC 1076
||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 900 GAAAATGCTTGGTGCCAACGCTTCGTCAAGTTTCTACAATTTGGCTTTTAAGCTTGATCC 959
Query 1077 TGATTTGACATTGTTCGTTAACGAGTACAACACGATAGAGAACCGTGTAGAGGTTACCGC 1136
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 TGATGTGACAATGTTCGTTAACGAGTACAACACGATAGAGAACCGTGTAGAGGTTACCGC 1019
Query 1137 GACGCCGGTTAAGGTGAAGGAGAAGATGGAGGAGATTCTTGCATACCCAGGTAACATGAA 1196
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1020 GACGCCGGTTAAGGTGAAGGAGAAGATGGAGGAGATTCTTGCTTACCCAGGTAACATGAA 1079
Query 1197 CATTAAAGGAGCAATTGGAGCTCAGGGTCACTTTCGTCCAACTCAGCCTAACTTAGCTTA 1256
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1080 CATTAAAGGAGCTATTGGAGCTCAAGGTCACTTTCGTCCAACTCAGCCTAACTTAGCTTA 1139
Query 1257 CATGAGATCTGCATTGGATACTTTAGGCTCACTAGGTTTGCCTATTTGGCTTACAGAGCT 1316
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 1140 CATGAGATCTGCATTGGATACTTTAGGCTCACTAGGTTTGCCTATCTGGCTTACAGAGGT 1199
Query 1317 TGATATGCCTAAGTGCCCTAATCAGGAGATATACATTGAAGAAATTCTGAGGGAAGCATA 1376
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||
Sbjct 1200 TGATATGCCTAAGTGCCCTAATCAGGAGGTATACATTGAAGAAATTTTGAGGGAAGCGTA 1259
Query 1377 TTCGCATCCTGCGGTTAAAGGCATCATAATATTTGCTGGGCCTGAGGTGTCTGGTTTCGA 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 TTCGCATCCTGCGGTTAAAGGCATCATAATATTTGCTGGGCCTGAGGTGTCTGGTTTCGA 1319
Query 1437 CAAGCTAACACTTGCGGACAAAGACTTCAACAACACTGCAACAGGAGATGTAATTGACA- 1495
|||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1320 CAAGCTGACACTTGCGGACAAATACTTCAACAACACTGCAACAGGAGATGTAATTGACAA 1379
Query 1496 GTTTGCTCAAGGAGTGGCAGCAATCTTCAGAGATTCCAAAGATTTTTATGAAGGATTCCG 1555
||| ||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||
Sbjct 1380 GTT-GCTCAAGGAGTGGCAGCAATCTTCAGAGATTCCCAAGATTTTCATGACGGATTCCG 1438
Query 1556 AGAATGACGAAGAAGAGGTCTCATTGTTGCATGGATATTACAATGTGAATGTAAGTCATA 1615
||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1439 AGAATGATGAAGAAGAGGTCTCATTGTTGCATGGACATTACAATGTGAATGTAAGTCATC 1498
Query 1616 CATGGATGAAGAACATGTCCACCAGTTTCAGTTTGGAGGTAACTAAGGAGATGGGTCAGC 1675
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1499 CATGGATGAAGAACATGTCAACCAGTTTCAGCTTGGAGGTAACTAAGGAGATGGGTCAGC 1558
Query 1676 GTCAGGTGGTTAGAGTTGTAATTAATGCTTGA 1707
||||||||||||||||||||||||||||||||
Sbjct 1559 GTCAGGTGGTTAGAGTTGTAATTAATGCTTGA 1590
> AT4G33820.1 | Symbols: | Glycosyl hydrolase superfamily protein
| chr4:16217004-16219525 REVERSE LENGTH=1729
Length=1729
Score = 2100 bits (1137), Expect = 0.0
Identities = 1535/1726 (89%), Gaps = 32/1726 (2%)
Strand=Plus/Plus
Query 1 ATGAAGAACATCAACAATGGCTTCTTCCTCTGCATGCTTTTACTCCTCTGGTGTTTTGTG 60
||||| | |||||| ||||||||||||||||||||| |||| || |||||||| ||||
Sbjct 11 ATGAACAGCATCAAGAATGGCTTCTTCCTCTGCATGATTTTTCTTCTCTGGTGCCATGTG 70
Query 61 CATTC-GGGGATTTCCATTGATCCTTTCTCCCAAAGCGACTCTCTCAAAACAGAGTGTGT 119
|||| |||| ||||||| |||||||||||||| ||| |||||||||| |||||||||||
Sbjct 71 GATTCAGGGG-TTTCCATCGATCCTTTCTCCCATAGCCACTCTCTCAACACAGAGTGTGT 129
Query 120 AATGAAGCCTCCACGAAGCAGTGAAACGCAAGGATTATTACAATTTAGCCGTTCTGTCGA 179
||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||
Sbjct 130 GATGAAGCCTCCACGAAGCAGTGAAACGAAAGGATTATTACAATTTAGCCGCTCTCTCGA 189
Query 180 AGCTGACTCTGATGAAGAATGGAAAATAGATGAAAATGGATCCATTAGAGAAATGACACA 239
|| |||||||||||||||||||||||| |||| |||||||| ||||||||||||| ||||
Sbjct 190 AGATGACTCTGATGAAGAATGGAAAATTGATGGAAATGGATTCATTAGAGAAATGGCACA 249
Query 240 GAGAATTCAGCTTCAACAAGGAAACATCTACAGCTTCTCCGCTTGGGTGAAGTTGAGAGA 299
||||||||||||||| |||||||| || ||||||||||| ||||||||||| ||||||||
Sbjct 250 GAGAATTCAGCTTCACCAAGGAAATATTTACAGCTTCTCTGCTTGGGTGAAATTGAGAGA 309
Query 300 AGGAAACAAGAAGAAAGTAGGAGTTGTATTCAGGACAGAAAATGG-AG--TTGTTCATGG 356
||||||| | ||||||||||||||||| ||||||||||||||||| || ||||||||||
Sbjct 310 AGGAAACGACAAGAAAGTAGGAGTTGTGTTCAGGACAGAAAATGGAAGACTTGTTCATGG 369
Query 357 AGGTGAAGTTAGGGCAAAGCAAGGATGTTGGACTTTACTTAAAGGTGGCATTGTGCCAGA 416
|||||||||||||||||| |||| |||||||||||| ||||||||||||||||| |||||
Sbjct 370 AGGTGAAGTTAGGGCAAATCAAGAATGTTGGACTTTGCTTAAAGGTGGCATTGTACCAGA 429
Query 417 TTTTTCAGGCTCTGTAGATATTTTCTTCGAGACTGATGACAAAGAAGCAAAGATTTCTGC 476
|||||||||| |||||||||| |||||||||| ||| ||| || ||||||||| |||||
Sbjct 430 TTTTTCAGGCCCTGTAGATATATTCTTCGAGAGTGAAAACAGAGGAGCAAAGATCTCTGC 489
Query 477 A-AGCGATGTGTCGCTGAAACAGTTCAGCAAAGAAGAATGGAAACTGAAACAAGACCGAC 535
| | | |||||| ||| |||||||| |||||||||||||||||||||||||| |||| ||
Sbjct 490 ACA-CAATGTGTTGCTAAAACAGTTTAGCAAAGAAGAATGGAAACTGAAACAGGACCAAC 548
Query 536 TTATTGAAAAGATAAGGAAGAGCAAAGTGAGATTTGAAGTAACTTATCAGAACAAAACTG 595
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 549 TTATTGAAAAGATAAGGAAGAGCAAAGTGAGATTTGAAGTAACTTATGAGAACAAAACCG 608
Query 596 CGGTAAAAGGCGCAGTGATATCCA-TAGAACAAACCAAACCATCTTTCCTCTTAGGGTGC 654
| |||||||||| |||||||| || || ||||||||||| ||||||| |||||||| ||
Sbjct 609 CAGTAAAAGGCGTAGTGATAT-CACTAAAACAAACCAAATCATCTTTTCTCTTAGGCTGT 667
Query 655 GCAATGAATTTCCGGATCCTACAAAGCGAAGGGTACAGAAATTGGTTTGCGTCGCGGTTT 714
| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 668 GGAATGAATTTCCGGATCCTACAAAGCCAAGGGTACAGAAAATGGTTTGCGTCGCGGTTC 727
Query 715 AAAATCACATCCTTCACCAATGAAATGAAATGGTATACAACGGAGAAAGAACGTGGTCAA 774
|||||||| || ||||| |||||||||||||||||| |||||||||||| ||| ||||||
Sbjct 728 AAAATCACTTCATTCACTAATGAAATGAAATGGTATGCAACGGAGAAAGCACGAGGTCAA 787
Query 775 GAGAACTACACGGCAGCTGACTCAATGCTGAAATTTGCGGAAGAGAATGGAATATTGGTT 834
||||||||||||| ||| || ||||||||||||||||||||||| ||||| |||||||||
Sbjct 788 GAGAACTACACGGTAGCCGATTCAATGCTGAAATTTGCGGAAGATAATGGGATATTGGTT 847
Query 835 AGAGGTCATACTGTGCTGTGGGACGACCCAATAATGCAACCAAGTTGGGTACAAAAA-AT 893
||||||||||| ||| | |||||| |||||| |||||| || |||||||| ||||| ||
Sbjct 848 AGAGGTCATACAGTGTTATGGGACAACCCAAAAATGCAGCCTAGTTGGGT-GAAAAATAT 906
Query 894 AAAAGACCCAAATGATTTGATGAACGTGACATTGAACCGGATAAACTCGGTAATGACGAG 953
|||||| || || ||| |||||||||||||||||||| |||| |||||||| |||| |||
Sbjct 907 AAAAGATCCGAACGATGTGATGAACGTGACATTGAACAGGATCAACTCGGTTATGAAGAG 966
Query 954 ATACAAAGGGAAGTTAACCGGGTGGGATGTGGTTAATGAGAA-CGTGCACTGGGATTACT 1012
|||||||||||||||||||||||||||||||||||| ||||| | |||| ||||||||||
Sbjct 967 ATACAAAGGGAAGTTAACCGGGTGGGATGTGGTTAACGAGAATC-TGCATTGGGATTACT 1025
Query 1013 TTGAGAAAATGCTTGGTGCAAACGCTTCGTCAAGTTTCTACAATTTGGCTTTTAAGCTAG 1072
||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |
Sbjct 1026 TTGAGAAAATGCTTGGTGCAAACGCTTCGACAAGTTTCTACAATCTGGCTTTTAAGATTG 1085
Query 1073 ATCCTGATTTGACATTGTTCGTTAACGAGTACAACACGATAGAGAAC-CGTGTAGAGGTT 1131
|||||||| ||| |||||| |||||||||||||| |||||||| ||| | | |||| ||
Sbjct 1086 ATCCTGATGTGAGATTGTTTGTTAACGAGTACAATACGATAGAAAACAC-TAAAGAGTTT 1144
Query 1132 ACCGCGACGCCGGTTAAGGTGAAGGAGAAGATGGAGGAGATTCTTGCATACCCAGGTAAC 1191
|| ||||||||| | ||||||||| ||| ||||||||| ||||| || || ||||| |||
Sbjct 1145 ACTGCGACGCCGATAAAGGTGAAGAAGATGATGGAGGAAATTCTCGCCTATCCAGGAAAC 1204
Query 1192 ATGAACATTAAAGGAGCAATTGGAGCTCAGGGTCACTTTCGTCCAACTCAGCCTAACTTA 1251
| |||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1205 AAGAACATGAAAGGAGCAATTGGAGCTCAGGGTCACTTTGGTCCAACTCAGCCTAACTTA 1264
Query 1252 GCTTACATGAGATCTGCATTGGATACTTTAGGCTCACTAGGTTTGCCTATTTGGCTTACA 1311
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1265 GCTTACATAAGATCTGCATTGGATACTTTAGGCTCACTAGGTTTGCCTATTTGGCTTACA 1324
Query 1312 GAGCTTGATATGCCTAAGTGCCCTAATCAGGAG-ATATACATTGAAGAAATTCTGAGGGA 1370
||| ||||||||||||| ||||||||||||| | | |||| | ||||| ||||| |||||
Sbjct 1325 GAGGTTGATATGCCTAAATGCCCTAATCAGGCGCA-ATACGTGGAAGACATTCTCAGGGA 1383
Query 1371 AGCATATTCGCATCCTGCGGTTAAAGGCATCATAATATTTGCTGGGCCTGAGGTGTCTGG 1430
||| || |||||||||||||| ||||| ||||||||||||| ||| ||||||||||||||
Sbjct 1384 AGCTTACTCGCATCCTGCGGTGAAAGGTATCATAATATTTGGTGGACCTGAGGTGTCTGG 1443
Query 1431 TTTCGACAAGCTAACACTTGCGGACAAAGACTTCAACAACACTGCAA-CAGGAGATGTAA 1489
||| |||||||| |||||||| |||||||||||||||||||| ||| | ||||||||||
Sbjct 1444 TTTTGACAAGCTGACACTTGCAGACAAAGACTTCAACAACACA-CAAACGGGAGATGTAA 1502
Query 1490 TTGACA-GTTTGCTCAAGGAGTGGCAGCAA---TCTTCAGAGATTCCAAA-GATTTTTAT 1544
|||| | ||| ||||||||||||||| ||| ||||||||||||| ||| || ||| |
Sbjct 1503 TTGATAAGTT-GCTCAAGGAGTGGCAACAAAAATCTTCAGAGATTC-AAACGAATTTCAC 1560
Query 1545 -GAAGGATTCCGAGAATGACGAAGAAGAGGTCTCATTGTTGCATGGATATTACAATGTGA 1603
| || |||| || ||||| || |||||||||||||||||||||||| |||| |||||||
Sbjct 1561 AGCAG-ATTCTGATAATGAAGAGGAAGAGGTCTCATTGTTGCATGGACATTATAATGTGA 1619
Query 1604 ATGTAAGTCATACATGGAT-GAAGAACATGTCCACCAGTTTCAGTTTGGAGGTAACTAAG 1662
||||||| ||| ||||||| | | ||| | |||||||||||||| |||||||||||||||
Sbjct 1620 ATGTAAGCCATCCATGGATAGCA-AACCTATCCACCAGTTTCAGCTTGGAGGTAACTAAG 1678
Query 1663 GAGATGGGTCAGCGTC-AGGTGGTTAGAGTTGTAATTAATGCTTGA 1707
||||||| ||| | | ||||| ||||||| ||||||| |||||||
Sbjct 1679 GAGATGGATCAA-GACCAGGTGATTAGAGTCGTAATTAGTGCTTGA 1723
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84387116145
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5