BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg353505
Length=1491
Score E
Sequences producing significant alignments: (Bits) Value
AT4G33150.1 | Symbols: | lysine-ketoglutarate reductase/saccha... 2071 0.0
> AT4G33150.1 | Symbols: | lysine-ketoglutarate reductase/saccharopine
dehydrogenase bifunctional enzyme | chr4:15985189-15991536
REVERSE LENGTH=3576
Length=3576
Score = 2071 bits (1121), Expect = 0.0
Identities = 1344/1451 (93%), Gaps = 18/1451 (1%)
Strand=Plus/Plus
Query 1 ATGAAATCAAGTGG-C--GGGGAGGAGAAGAAGTTGGGGAATGGAGTTGTTGGAATTCTA 57
||||| |||| ||| | | |||||||||||||||||||||||||||||| || ||||||
Sbjct 92 ATGAATTCAAATGGCCATGAGGAGGAGAAGAAGTTGGGGAATGGAGTTGTGGGGATTCTA 151
Query 58 GCTGAAACAGCGAACAAATGGGAGAGACGAACACCATTGACGCCATCTCATTGCGCTCGC 117
|||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 152 GCTGAAACAGTTAACAAATGGGAGAGACGAACACCATTGACGCCATCGCATTGCGCTCGC 211
Query 118 CTTTTACGCGGTGACAAAGACAGAACCGGCGTTTCCCGCATTGTGGTTCAGCCATCTGGT 177
||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 212 CTTTTACACGGTGGGAAAGACAGAACCGGCATTTCCCGCATTGTGGTTCAGCCATCTGCT 271
Query 178 AAGCGTATCCATCATGATGCCTTGTATGAAGATGTCGGATGTGAAATTTCTGATGATTTG 237
||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct 272 AAGCGTATCCATCATGATGCCTTGTATGAAGATGTTGGGTGTGAAATTTCTGATGATTTG 331
Query 238 TCTGATTGTGGGCTTATACTCGGAATCAAACAACCTGAGCTAGAAATGATTCTTCCGGAG 297
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 332 TCTGATTGTGGGCTTATACTTGGAATCAAACAACCTGAGCTAGAAATGATTCTTCCAGAG 391
Query 298 AGAGCTTATGCTTTCTTCTCACACACTCATAAAGCACAAAAAGAAAACATGCCTTTGTTG 357
||||| || |||||||| ||||| |||||||| ||||| ||||| |||||||||||||||
Sbjct 392 AGAGCATACGCTTTCTTTTCACATACTCATAAGGCACAGAAAGAGAACATGCCTTTGTTG 451
Query 358 GATAAAATTCTTTCTGAGAGAGTGACATTGTGTGATTATGAGCTCATCGTTGGAGATCAT 417
|||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 452 GATAAAATTCTTTCTGAGAGAGTGACTTTGTGTGATTATGAGCTCATTGTTGGGGATCAT 511
Query 418 GGGAAGA-GATTATTGGCATTTGGTAAATATGCAGGCAGAGCTGGTCTTGTTGACTTCTT 476
||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 512 GGGAA-ACGATTATTGGCGTTTGGTAAATATGCAGGCAGAGCTGGTCTTGTTGACTTCTT 570
Query 477 ACACGGACTGGGACTGAGATATTTAAGTCTAGGATACTCAACGCCTTTCCTCTCGCTCGG 536
||||||||| |||| | ||||| ||||||||||||||||||| |||||||||||||||||
Sbjct 571 ACACGGACTTGGACAGCGATATCTAAGTCTAGGATACTCAACACCTTTCCTCTCGCTCGG 630
Query 537 TTCATCCTATATGTATTCCTCCTTAGCTGCAGCAAAAGCCGCTGTGATTTCTGTTGGTGA 596
| |||| |||||||||||||| || ||||| |||||||||||||| ||||||||||||||
Sbjct 631 TGCATCGTATATGTATTCCTCATTGGCTGCTGCAAAAGCCGCTGTAATTTCTGTTGGTGA 690
Query 597 AGAAATTGCAGGCCAAGGG-CTGCCATTAGGAATCTGCCCTCTTGTATTTGTCTTCACCG 655
|||||||||| ||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 691 AGAAATTGCAAGCC-AGGGACTGCCATTAGGAATCTGCCCTCTTGTATTTGTCTTCACCG 749
Query 656 GAACAGGAAATGTTTCTCTTGGGGTGCAAGAAATTTTCAAGCTTCTTCCTCACACTTTTG 715
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 750 GAACAGGAAATGTTTCTCTGGGGGCGCAAGAAATTTTCAAGCTTCTTCCTCACACTTTTG 809
Query 716 TTGAACCAAGCAACCTTCCTGAACTATTTGCAAAAAACCAAGGAATTAGCCAAAATGGAA 775
||||||||||||| |||||||||||||||| |||| || |||||||||| |||||||| |
Sbjct 810 TTGAACCAAGCAAACTTCCTGAACTATTTGTAAAAGACAAAGGAATTAGTCAAAATGGGA 869
Query 776 AATCAACAAAACGAGTCTATCAACTATATGGTTGTATCATTACAAGCCAAGACATGGTTG 835
|||||||| |||||||||||| ||||||||||||| ||||| ||||||||||||||||
Sbjct 870 TTTCAACAAAGCGAGTCTATCAAGTATATGGTTGTATTATTACCAGCCAAGACATGGTTG 929
Query 836 AACACAA-GAATCCATCAAAGTCGTTCGACAAAGCTGACTATTATGCACACCCGGAACAC 894
||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 930 AACACAAAGA-TCCATCAAAGTCATTCGACAAAGCCGACTATTATGCACACCCGGAACAT 988
Query 895 TACAATCCAGTGTTCCACGAAAAGATATTC-CCTTATACGTCTGTTCTTGTAAACTGTAT 953
||||||||||| |||||||||||||||| | || ||||||||||||||||||||||||||
Sbjct 989 TACAATCCAGTTTTCCACGAAAAGATAT-CGCCATATACGTCTGTTCTTGTAAACTGTAT 1047
Query 954 GTACTGGGAGAAGAAGTTTCCCCGTCTTCTGAGCACCAAACAGCTTCAAGATTTAACaaa 1013
|||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct 1048 GTACTGGGAGAAGAGGTTTCCCTGTCTTCTGAGCACAAAACAGCTTCAAGATTTAACAAA 1107
Query 1014 aaaaaGATGTCC-ACTAGTGGGAATATGTGATATAACTTGTGATATCGGTGGCTCCATTG 1072
|||| || ||| |||||| || |||||||||||||||||||| ||||||||||||||||
Sbjct 1108 AAAAGGAC-TCCCACTAGTAGGCATATGTGATATAACTTGTGACATCGGTGGCTCCATTG 1166
Query 1073 AATTTGTTAACCGAGCTACGATAATCGATTCCCCTTTCTTTAGGTTTAATCCCTCGAACA 1132
||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct 1167 AATTTGTTAACCGAGCTACTTTAATCGATTCCCCTTTCTTCAGGTTTAATCCCTCGAACA 1226
Query 1133 ATTCATACTACGATGACATGGATGGTGATGGCGTAATATGCATGGCCATTGAAACTTTAC 1192
||||||||||||||||||||||||| ||||||||| |||||||||| |||| | |||||
Sbjct 1227 ATTCATACTACGATGACATGGATGGGGATGGCGTACTATGCATGGCTGTTGACATTTTAC 1286
Query 1193 CAACAGAATTTGCAAAAGAGGCATCCCAGCATTTTGGAGATATTCTTTCAGAATTTGTCG 1252
| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 1287 CCACAGAATTTGCAAAAGAGGCATCCCAGCATTTTGGAGATATTCTTTCCGGATTTGTCG 1346
Query 1253 GAAGTTTGGCTTCGATGACTGAAATTGCAGATCTACCAGCACATCTGAAGAGGGCTTGCA 1312
| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1347 GTAGTTTGGCTTCAATGACTGAAATTTCAGATCTACCAGCACATCTGAAGAGGGCTTGCA 1406
Query 1313 TAAGCTATATGGGAGAGTTGACATCTTTGTATGAGTATATTCCACGTATGAGGAAGTCAA 1372
||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1407 TAAGCTATAGGGGAGAATTGACATCTTTGTATGAGTATATTCCACGTATGAGGAAGTCAA 1466
Query 1373 ATCCAGAAGAGGAACAA-ACTAATATC-TC-C-AACGGGGTTTCCAACCACAGAACATAC 1428
|||||||||||| |||| | |||||| || | ||||||||||||| ||| ||||||| |
Sbjct 1467 ATCCAGAAGAGGCACAAGA-TAATATTATCGCCAACGGGGTTTCCAGCCAGAGAACATTC 1525
Query 1429 AACATATTGGT 1439
|||||||||||
Sbjct 1526 AACATATTGGT 1536
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73543798425
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5