BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg353621 Length=375 Score E Sequences producing significant alignments: (Bits) Value AT4G32090.1 | Symbols: | Beta-1,3-N-Acetylglucosaminyltransfer... 571 1e-162 AT4G32080.1 | Symbols: | unknown protein; Has 7 Blast hits to ... 316 7e-86 > AT4G32090.1 | Symbols: | Beta-1,3-N-Acetylglucosaminyltransferase family protein | chr4:15509990-15510820 REVERSE LENGTH=375 Length=375 Score = 571 bits (309), Expect = 1e-162 Identities = 354/376 (94%), Gaps = 2/376 (1%) Strand=Plus/Plus Query 1 ATGGCGTTTGCTCTTAAATGTTTTGTTGTTTTTGTTCTTCTCTCTATGGTTTCTCAAGGA 60 |||||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||| Sbjct 1 ATGGCGTTTGCTCTTAAATGTTTTGTTGTTGTTCTTCTTCTCTCTATGGTCTCTCATGGA 60 Query 61 CTGTGCCACTGCACTTTTGGTAAGATCCGGATCGGAGCGGTGAGGACAGGGAGAGAAATC 120 ||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||| Sbjct 61 CTGTGCCTTTGCACTTTTGGCAAGATCCAGATCGGAGCGGTGAGGACAGGAAGAGAAATC 120 Query 121 -GCTGGACAGCCGGAGTGGAAAGTGACGGTAACCAACACGTGCAATTGTTTTCAGAAGCA 179 || || ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 121 GGC-GGGCAGCCGGAGTGGAAAGTGACGGTAATCAACACGTGCAATTGTTTTCAGAAGCA 179 Query 180 CGTGACTCTGTCTTGCGGAGGGTTTGTTCCTGCGAAGCCTGTCAAGCCATCGCTGCTTCA 239 ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 180 CGTGACTCTATCTTGCGGAGGGTTTGCTCCTGCGAAGCCTGTCAAGCCATTGCTGCTTCA 239 Query 240 GCCACAAGGAAACACGTGTCTTCTGATTAAAGGAGCATCTTTGCCAGCTGGCGCCACCGC 299 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 240 GCCACAAGGAAACACGTGTCTTATGATTAAAGGAGCAGCTTTGCCAGCTGGCGCCACCGC 299 Query 300 TCAGTTCACTTACGCCGGTCAGCCTTACATCTTCAGACCCGTTGGTTCCATGGTCGACCC 359 ||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct 300 TCAGTTCACATACGCCGGCCAGCCTTACATCTTCAGACCCGTTGGTTCCAAGGTCGACCC 359 Query 360 AAGTTGCAAGAATTGA 375 |||||||| ||||||| Sbjct 360 AAGTTGCACGAATTGA 375 > AT4G32080.1 | Symbols: | unknown protein; Has 7 Blast hits to 7 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr4:15508231-15509111 REVERSE LENGTH=881 Length=881 Score = 316 bits (171), Expect = 7e-86 Identities = 268/315 (85%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 57 AGGACTGTGCCACTGCACTTTTGGTAAGATCCGGATC-GGAGCGGTGAGGACAGGGAGAG 115 |||| |||||| ||||||||| || | |||| |||| ||| |||| ||||| |||| || Sbjct 365 AGGAATGTGCCGCTGCACTTTCGGCGACATCCAGATCGGGA-CGGTAAGGACCGGGAAAG 423 Query 116 AAATCGCTGGACAGCCGGAGTGGAAAGTGACGGTAACCAACACGTGCAATTGTTTTCAGA 175 ||||| | ||||| ||||||||||||||||||||||||||||||||||| ||| | |||| Sbjct 424 AAATCTCCGGACAACCGGAGTGGAAAGTGACGGTAACCAACACGTGCAAGTGTCTGCAGA 483 Query 176 AGCACGTGACTCTGTCTTGCGGAGGGTTTGTTCCTGCGAAGCCTGTCAAGCCATCGCTGC 235 |||||||||||||||||||||||||||||| ||||| |||||||||| |||||| ||| | Sbjct 484 AGCACGTGACTCTGTCTTGCGGAGGGTTTGCTCCTGTGAAGCCTGTCGAGCCATGGCTAC 543 Query 236 TTCAGCCACAAGGAAACACGTGTCTTCTGATTAAAGGAGCAT-CTTTGCCAGCTGGCGCC 294 | | ||||| ||||||| |||||||||||| ||||||| | ||||||||||||||||| Sbjct 544 TGCTCCCACAGGGAAACAGGTGTCTTCTGATCAAAGGAG-AGGCTTTGCCAGCTGGCGCC 602 Query 295 ACCGCTCAGTTCACTTACGCCGGTC-AGCCTTACATCTTCAGACCCGTTGGTTCCATGGT 353 | || |||||| ||||||||| | |||||||||||||||||| | | ||||| | || Sbjct 603 TCTGCAGAGTTCAGTTACGCCGG-CGAGCCTTACATCTTCAGACTCATCGGTTCGACCGT 661 Query 354 CGACCCAAGTTGCAA 368 ||| ||||| ||||| Sbjct 662 CGATCCAAGCTGCAA 676 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17643979899 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5