BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg353623
Length=2361
Score E
Sequences producing significant alignments: (Bits) Value
AT4G32070.1 | Symbols: Phox4 | Octicosapeptide/Phox/Bem1p (PB1)... 3393 0.0
AT2G25290.1 | Symbols: Phox1 | Octicosapeptide/Phox/Bem1p (PB1)... 1371 0.0
> AT4G32070.1 | Symbols: Phox4 | Octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat (TPR)-containing
protein | chr4:15504662-15507176 REVERSE LENGTH=2515
Length=2515
Score = 3393 bits (1837), Expect = 0.0
Identities = 2095/2214 (95%), Gaps = 40/2214 (2%)
Strand=Plus/Plus
Query 1 ATGGGAAAGCCAACGGCGAAGAAGAAAAATCCGGAGACGCCAAAAGATGCTT----C--C 54
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 80 ATGGGAAAGCCAACGGCGAAGAAGAAAAATCCGGAGACGCCAAAAGATGCTTCCGGCGGC 139
Query 55 GGCGGCGGC---GGAGGCAAGTCAGGGAAAACTTACAATCGTTCTACTTCGAGGGCATTT 111
||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 140 GGCGGCGGCGGTGGAGGCAAGTCAGGGAAAACTTACCATCGTTCTACTTCGAGGGTATTT 199
Query 112 GACGAAGATATGGAGATCTTCATTAGCAGAGCACTTGAGCTCAAAGAAGAAGGTAACAAG 171
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 200 GACGAAGATATGGAGATTTTCATTAGCAGAGCACTTGAGCTCAAAGAAGAAGGTAACAAG 259
Query 172 TTGTTCCAGAAACGCGACCACGAAGGTGCCATGTTGAGTTTCGACAAAGCCTTGAAGCTC 231
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 260 TTGTTCCAGAAACGCGACCACGAAGGTGCGATGTTGAGTTTCGACAAAGCCTTGAAGCTC 319
Query 232 TTG-CCTAAGAATCATATCGATGTAGCTTATCTAAGAACGAGTATGGCTTCTTGTTATAT 290
||| || ||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 320 TTGCCCAAAG-ATCATATCGATGTAGCTTATCTTAGAACGAGTATGGCTTCTTGTTATAT 378
Query 291 GCAAATGGGATTAGGTGAGTATCCGAATGCGATTAGCGAATGTAATTTGGCTCTTGAGGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 379 GCAAATGGGATTAGGTGAGTATCCGAATGCGATTAGCGAATGTAATTTGGCTCTTGAAGC 438
Query 351 TTCTCCTAGGTACAGTAAGGCTTTAGTGAGACGGTCTCGGTGTTACGAGGCTTTGAATAA 410
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 439 TTCTCCTAGGTACAGTAAGGCTTTAGTCAGACGTTCTCGGTGTTACGAGGCTTTGAATAA 498
Query 411 GTTAGATTACGCGTTTAGGGATGCTCGTATTGTTTTGAATATGGAGCC-GGAAAATGTGT 469
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 499 GTTAGATTACGCGTTTAGGGATGCTCGTATTGTTTTGAATATGGAGCCAGG-AAATGTGT 557
Query 470 CTGCGAATGAAATCTTTGATAGGGTGAAGAAGGTGTTGGTGGATAAAGGTGTTGATGTGG 529
|||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 558 CTGCAAATGAAATCTTTGATAGGGTGAAGAAAGTGTTGGTGGATAAAGGTATTGATGTGG 617
Query 530 ATGAAATGGAGAAGAACTTTGTTGATGTGCAGCCTGTTGGCGCAGCTCGTTTGAAGAAGA 589
|||||||||||||| ||||||| ||||| ||||||||| |||| ||||||||||||||||
Sbjct 618 ATGAAATGGAGAAGGACTTTGTCGATGTACAGCCTGTTTGCGCTGCTCGTTTGAAGAAGA 677
Query 590 TTGTCAAGGAGAGGTTGAGgaagaag-aagaagaagaagaagaGTGGTGGGAAGGATGAG 648
|||| |||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct 678 TTGTGAAGGAGAGGTTGAGGAAG-AGTAAGAAGAAGAAAAAGAGTGGTGGGAAGGATGAG 736
Query 649 GAACTGAAGAGCAACAACAGAGTTGTTGTTGAGAGTCCAAAGGTTGTTGTTGACAAGGGA 708
||||||||||| | || | || || ||||||||||||||||||
Sbjct 737 GAACTGAAGAG--TC--CA-A----------AG-GT-----TGTTGTTGTTGACAAGGGA 775
Query 709 GACGAAGCAGAGAGCCGAAATAAGCTGAAGGAAGAAAAGAGCGATAAGTCTGAGATTGAT 768
|||||||||||| || ||||||||| |||||| |||||||||||||||||||| ||||||
Sbjct 776 GACGAAGCAGAGGGCAGAAATAAGCCGAAGGAGGAAAAGAGCGATAAGTCTGACATTGAT 835
Query 769 GGGAAGAGTGGTGGC-AGTAGAGAAGATAAGAAAACAAGTTTCAAGGGTGATAAAGGACA 827
|| |||| ||||||| || |||||||| |||||||||||||||||| |||||||||||||
Sbjct 836 GGAAAGATTGGTGGCAAG-AGAGAAGAAAAGAAAACAAGTTTCAAGAGTGATAAAGGACA 894
Query 828 GAAAAAGAAAAGTGGTGGTAAGAAGGCAGGAGAAGAGAGGAAGGTGGAGGATAAGGTCGT 887
||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 895 GAAAAAGAAAAGTGGTGGTAATAAAGCAGGAGAAGAGAGGAAGGTGGAGGATAAGGTCGT 954
Query 888 TGTTATGGACAAAGAGGTCATTGCTTCCGAGATTGTTGAAGGAGGAGGAAGCACAAAAGG 947
||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 955 TGTTATGGACAAAGAGGTCATTGCTTCCGAGATTGTTGATGGAGGAGGAAGCAAAAAAGA 1014
Query 948 AGGGGCAACGGTTACTAGGACTGTCAAGTTGGTACATGGAGATGATATAAGGTGGGCACA 1007
|||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 1015 AGGGGCAACGGTTACTAGGACTATCAAGCTGGTACATGGAGATGATATAAGGTGGGCACA 1074
Query 1008 ATTGCCGCTGGATTCTACTGTTAGACTTGTAAGAGATGTAATCAGGGATCGGTTTCCTGC 1067
||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1075 ATTGCCGTTGGATTCTACTGTTAGACTTGTGAGAGATGTAATCAGGGATCGCTTTCCTGC 1134
Query 1068 T-TTAAGGGGTTTCCTCATTAAATATAGGGATACAGAAGGTGACTTGGTAACCATTACCA 1126
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1135 TCTT-AGGGGTTTCCTCATTAAATATAGGGATACAGAAGGTGACTTGGTAACCATTACCA 1193
Query 1127 CAACAGATGAGCTGAGGCTAGCTGCTTCTACTCATGATAAACTTGGTTCCCTTAGATTAT 1186
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1194 CAACTGATGAGCTGAGGCTAGCTGCTTCTACTCATGATAAACTTGGCTCCCTTAGATTAT 1253
Query 1187 ATATAGCAGAAGTTAACCCCGACCAAGAACCAACCTATGATGGCATGAGCAATACTGAAT 1246
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1254 ATATAGCAGAAGTTAACCCTGACCAAGAACCAACCTATGATGGCATGAGCAATACTGAAT 1313
Query 1247 CAACTGACAAGGTTGCCAAGAGATTGAGCAGCCTTGCGGACAATGGAAGTGTCGGAGAAT 1306
|||||||||||||| |||||||||| || ||||||||||||||||| ||||| |||||||
Sbjct 1314 CAACTGACAAGGTTTCCAAGAGATTAAGTAGCCTTGCGGACAATGGTAGTGTTGGAGAAT 1373
Query 1307 ACTTGGAATCTGACAAAGCATCTGCGTGCTTTGAAAACTGGATTTTCCAGTTTGCGCAAT 1366
|| ||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 1374 ACGTGGGATCTGACAAAGCATCTGGGTGCTTTGAGAACTGGATTTTCCAGTTTGCGCAAT 1433
Query 1367 TGTTCAAGAACCATGTTGGGTTTGATTCTGACTCGTACTTGGACCTTCATGACCTTGGGA 1426
|||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct 1434 TGTTTAAGAACCATGTTGGGTTTGATTCTGATTCGTACGTGGACCTTCATGACCTTGGGA 1493
Query 1427 TGAAGCTATATACGGAAGCAATGGAGGATGCTGTCACTGGTGAAGATGCGCAGGAACTCT 1486
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 TGAAGCTGTATACGGAAGCAATGGAGGATGCTGTCACTGGTGAAGATGCGCAGGAACTCT 1553
Query 1487 TTGAAATCGCTGCTGATAAGTTCCAAGAAATGGGTGCACTAGCTTTGTTTAACTGGGGTA 1546
|| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||
Sbjct 1554 TTCAAATCGCTGCTGATAAGTTCCAAGAAATGGGGGCACTAGCTTTGTTGAACTGGGGTA 1613
Query 1547 ACGTTCACATGTCCAAGGCAAGGAAGCAGGTCTGTTTACCCGAGGATGCCTCGAGAGAAA 1606
|||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||
Sbjct 1614 ACGTTCACATGTCCAAGGCAAGGAAGCAAGTCTGTATACCCGAGGATGCCTCTAGAGAAG 1673
Query 1607 CTATAATAGAAGCAGTTGAGGCTGCATTTGTGTGGACATGGAACGAGTACAACAAAGCTG 1666
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1674 CTATAATAGAAGCAGTTGAGGCTGCATTTGTGTGGACACAGAACGAGTACAACAAAGCTG 1733
Query 1667 CAGAGAAATATGAAGAAGCGATTAAGGTTAAACCTGATTTTTACGAAGCTCTTCTAGCAC 1726
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1734 CAGAGAAATATGAAGAAGCAATTAAGGTTAAACCTGATTTTTACGAAGCTCTTCTAGCAC 1793
Query 1727 TTGGGCAAGAGCAGTTTGAACAGGCAAAGCTTTGCTGGTATCATGCACTCAAAAGCAAGG 1786
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1794 TTGGGCAAGAGCAGTTTGAACATGCAAAGCTTTGCTGGTATCATGCACTCAAAAGCAAGG 1853
Query 1787 TAGACCTAGAAAGTGAGGTTTCCCAAGAGGTCCTGAAGCTCTATAACAAAGCTGAAGATA 1846
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct 1854 TAGACCTAGAAAGTGAGGCTTCTCAAGAGGTCCTGAAGCTCTATAACAAAGCTGAAGATA 1913
Query 1847 GTATGGAGAGGGGTATGCAGATCTGGGAAGAGATGGAAGAATGTCGTCTAAATGGAATCT 1906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1914 GTATGGAGAGGGGTATGCAGATCTGGGAAGAGATGGAAGAATGTCGTCTAAATGGAATCT 1973
Query 1907 CCAAGTTAGATAAACATAAAAACATGTTGCGGAAGTTGGAGTTGGATGAATTGTTTAGCG 1966
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1974 CCAAGTTAGATAAACATAAAAACATGTTGCGGAAGTTGGAGTTGGATGAATTGTTTAGTG 2033
Query 1967 AAGCTTCAGAAGAAGAAACTGTGGAGCAAACAGCTAATATGAGTTCTCAGATTAACCTCT 2026
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2034 AAGCTTCAGAAGAGGAAACTGTGGAGCAGACAGCTAATATGAGTTCTCAGATTAACCTCT 2093
Query 2027 TGTGGGGTTCGTTGTTATATGAACGGTCTATTGTGGAGTACAAGCTCGGGCTACCAACAT 2086
|||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 2094 TGTGGGGTTCGTTGCTATATGAACGGTCAATTGTGGAGTACAAGCTCGGGCTACCAACTT 2153
Query 2087 GGGATGAATGTTTAGAGGTTGCAGTGGAGAAATTTGAACTAGCTGGAGCTTCTGCAACTG 2146
||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 2154 GGGATGAATGTTTGGAGGTTGCAGTGGAGAAGTTTGAGCTAGCTGGAGCTTCTGCAACTG 2213
Query 2147 ATATAGCTGTGATGGTAAAGAATCATTGTTCAAGCGAGAGTGCACTTGAAGGTA 2200
|||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2214 ATATAGCTGTGATGGTAAAGAACCATTGTTCAAGCGAGAGTGCACTTGAAGGTA 2267
Score = 274 bits (148), Expect = 3e-72
Identities = 160/166 (96%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 2196 AGGTATGGGATTCAAGATTGATGAAATAGTACAGGCATGGAATGAGATGTATGATGCCAA 2255
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2350 AGGTATGGGATTCAAGATTGATGAAATAGTGCAGGCATGGAATGAGATGTATGATGCCAA 2409
Query 2256 GAGATGGCAGATGGGTGTCCCATCTTTCCGGCTAGAACCGATGTTCCGCAGACGAGCCCC 2315
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 2410 GAGATGGCAGATGGGTGTCCCATCTTTCCGGCTAGAACCAATGTTCCGGAGACGAGCTCC 2469
Query 2316 AAAACTGCATGATATCTTAGAGAATGTATTTTCAGGGCCTGCTTGA 2361
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2470 GAAACTGCATGATATCTTAGAGAATGTATTTTCAGGGCCTGTTTGA 2515
> AT2G25290.1 | Symbols: Phox1 | Octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein / tetratricopeptide repeat (TPR)-containing
protein | chr2:10765706-10768620 REVERSE LENGTH=2743
Length=2743
Score = 1371 bits (742), Expect = 0.0
Identities = 1266/1514 (84%), Gaps = 55/1514 (4%)
Strand=Plus/Plus
Query 859 GAAGAGAGGAAGGTGGAGGATAAGGTCGTTGTTATGGACAAAGAGGTCATTGCTTCCGAG 918
||||||| |||| | ||||||||||| | ||||||||||||||||||||||||||| |||
Sbjct 860 GAAGAGAAGAAGCTAGAGGATAAGGTTGCTGTTATGGACAAAGAGGTCATTGCTTCAGAG 919
Query 919 ATTGTTGAAGGAGGAGGAAGCACAAAAGGAGGGGCAACGGTTACTAGGACTGTCAAGTTG 978
| || | |||||| || ||||| || |||||||| || ||||||
Sbjct 920 A---TT-----A--AGGAAG-AC----------GCAACAGTGACTAGGACAGTGAAGTTG 958
Query 979 GTACATGGAGATGATATAAGGTGGGCACAATTGCCGCTGGATTCTACTGTTAG-ACTTGT 1037
|| ||||||||||||||| ||||||||||||||||| ||||||||| |||| | ||||||
Sbjct 959 GTTCATGGAGATGATATACGGTGGGCACAATTGCCGTTGGATTCTAGTGTT-GTACTTGT 1017
Query 1038 AAGAGATGTAATCAGGGATCGGTTTCCTGCT-TTAAGGGGTTTCCTCATTAAATATAGGG 1096
|||||||| || | |||||||||||||||| | || |||||| || || |||||||| |
Sbjct 1018 TAGAGATGTGATTAAGGATCGGTTTCCTGCTCTGAA-GGGTTTTCTGATCAAATATAGAG 1076
Query 1097 A-TACAGAAGGTGACTTGGTAACCATTACCACAACAGATGAGCTGAGGCTAGCTGCTTCT 1155
| | |||| ||||| ||||| |||||||| || || |||||||||||||| ||||| |||
Sbjct 1077 ACT-CAGAGGGTGATTTGGTTACCATTACTACGACGGATGAGCTGAGGCTGGCTGCGTCT 1135
Query 1156 ACTCA-TGATAAACTTGGTTCCCTTAGATTATATATAGCAGAAGTTAACCCCGACCAAGA 1214
|| | || |||||||| || ||||||| |||||||| ||||||| ||| | |||||
Sbjct 1136 AC-GAGGGAGAAACTTGGCTCTTTTAGATTGTATATAGCTGAAGTTAGTCCCAATCAAGA 1194
Query 1215 ACCAACCTATGATGGCA-TGAGCAAT-ACTGAATCAACTGACAAGGTTGCCAAGAGATTG 1272
|||||| ||||||| || ||| ||| | |||||||||||| ||| |||||||| ||| |
Sbjct 1195 ACCAACTTATGATGTCATTGA-TAATGA-TGAATCAACTGATAAGTTTGCCAAGGGATCG 1252
Query 1273 AGCAGCCTTGCGGACAATGGAAGTGTCGGAGAATACT-TGGAATCTGACAAAGCATCTGC 1331
|| || |||| || |||||||| |||||||| | | |||||||||| ||||||||| |
Sbjct 1253 AGTAGTGTTGCTGATAATGGAAGCGTCGGAGACT-TTGTGGAATCTGAGAAAGCATCTAC 1311
Query 1332 GTGCTTTGAAAACTGGATTTTCCAGTTTGCGCAATTGTTCAAGAACCATGTTGGGTTTGA 1391
|| |||| ||||||||||||||||||||||| |||| ||||||||||||||||||||
Sbjct 1312 CAGCCTTGAGCACTGGATTTTCCAGTTTGCGCAACTGTTTAAGAACCATGTTGGGTTTGA 1371
Query 1392 TTCTGACTCGTACTTGGACCTTCATGACCTTGGGATGAAGCTATATACGGAAGCAATGGA 1451
|||||| || |||||||| |||||| ||||||||||||| || ||||| |||||||||||
Sbjct 1372 TTCTGATTCTTACTTGGAACTTCATAACCTTGGGATGAAACTGTATACAGAAGCAATGGA 1431
Query 1452 GGATGCTGTCACTGGTGAAGATGCGCAGGAACTCTTTGAAATCGCTGCTGATAAGTTCCA 1511
||| ||||||||| ||||||||||| ||||||||||| || |||||||||||||| ||
Sbjct 1432 AGATATTGTCACTGGCGAAGATGCGCAAGAACTCTTTGATATTGCTGCTGATAAGTTTCA 1491
Query 1512 AGAAATGGGTGCACTAGCTTTGTTTAACTGGGGTAACGTTCACATGTCCAAGGCAAGGAA 1571
|||||||| |||||| || ||||||||||||| || ||||| ||||||||||||| |||
Sbjct 1492 AGAAATGGCTGCACTTGCAATGTTTAACTGGGGGAATGTTCATATGTCCAAGGCAA-GAA 1550
Query 1572 -GCAGGTCTGTTTACCCGAGGATGCCTCGAGAGAAACTATAATAGAAG-CAGTTGAGGCT 1629
|||| ||| ||| |||||||||| || || ||||||||| ||| || |||||||||
Sbjct 1551 GGCAGATCTATTTTCCCGAGGATGGTTCAAGGGAAACTATACTAG-AGAAAGTTGAGGCC 1609
Query 1630 GCATTTGTGTGGAC-ATGGAACGAGTACAACAAAGCTGCAGAGAAA-TATGAAGAAGCGA 1687
| ||||| |||| | | |||||||||||||||||||||||| ||| || |||| |||
Sbjct 1610 GGATTTGAGTGGGCGA-AGAACGAGTACAACAAAGCTGCAGA-AAAGTACGAAGGCGCGG 1667
Query 1688 TTAAGGTTAAACCTGATTTTTACGAAGCTCTTCTAGCACTTGGGCAAGAGCAGTTTGAAC 1747
|||| ||||| ||||||| || ||||||||||||||||| || ||| | |||||||| |
Sbjct 1668 TTAAAATTAAATCTGATTTCTATGAAGCTCTTCTAGCACTAGGCCAACAACAGTTTGAGC 1727
Query 1748 AGGCAAAGCTTTGCTGGTATCATGCACTCAAAAGCAAGGTAGACCTAGAAAGTGAGGTTT 1807
|||| ||||||||||||||||||||| | | || ||||||| ||||||| || | ||
Sbjct 1728 AGGCTAAGCTTTGCTGGTATCATGCATTGAGTGGCGAGGTAGATATAGAAAGCGATGCTT 1787
Query 1808 CCCAAGAGGTCCTGAAGCTCTATAACAAAGCTGAAGATAGTATGGAGAGGGGTATGCAGA 1867
| || || || || |||||||||||||||||||| || || ||||| | ||||||||| |
Sbjct 1788 CTCAGGATGTTCTAAAGCTCTATAACAAAGCTGAGGAGAGCATGGAAAAGGGTATGCAAA 1847
Query 1868 TCTGGGAAGAGATGGAAGAATGTCGTCTAAATGGAATCTCCAAGTTAGATAAACATAA-A 1926
| |||||||||||||||||| | |||||||||||||||||||| || |||||||||||
Sbjct 1848 TATGGGAAGAGATGGAAGAACGCCGTCTAAATGGAATCTCCAATTTCGATAAACATAAGG 1907
Query 1927 AACATGTTGCGGAAGTT-GGAGTTGGAT-GAATTGTTTAGCGAAGCTTCAGAAGAAGAAA 1984
||| || | | |||||| || |||||| ||| | ||||| ||||| || || |||||||
Sbjct 1908 AAC-TGCTACAGAAGTTAGG-CTTGGATGGAA-TCTTTAGTGAAGCGTCTGATGAAGAAA 1964
Query 1985 -CTGTGGAGCAAACAGCTAATATGAGTTCTCAGATTAA-CCTCTTGTGGGGTTCGTTGTT 2042
| | ||||||||||||||||||||||| |||||||| | || |||||||||| || |
Sbjct 1965 GC-GCAGAGCAAACAGCTAATATGAGTTCCCAGATTAATCTTC-TGTGGGGTTCCTTACT 2022
Query 2043 ATATGAACGGTCTATTGTGGAGTACAAGCTCGGGCTACCAACATGGGATGAATGTTTAGA 2102
||||||||||| || |||||||| || || || ||||| ||||||||||||||||| ||
Sbjct 2023 GTATGAACGGTCCATCGTGGAGTATAAACTTGGCCTACCGACATGGGATGAATGTTTGGA 2082
Query 2103 GGTTGCAGTGGAGAAATTTGAACTAGCTGGAGCTTCTGCAACTGATATAGCTGTGATGGT 2162
|||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct 2083 GGTTGCAGTGGAGAAATTTGAACTAGCTGGAGCTTCTGCAACCGATATTGCTGTAATGGT 2142
Query 2163 AAAGAATCATTGTTCAAGCGAGAGTGCACTTGAAGGTATGGGATTCAAGATTGATGAAAT 2222
|||||| || || ||||| || | ||||||||||||||||||||||||||| ||||| ||
Sbjct 2143 AAAGAACCACTGCTCAAGTGACAATGCACTTGAAGGTATGGGATTCAAGATCGATGAGAT 2202
Query 2223 AGTACAGGCATGGAATGAGATGTATGATGCCAAGAGATGGCAGATGGGTGTCCCATCTTT 2282
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 2203 AGTACAGGCATGGAATGAGATGTATGATGCCAAAAGATGGCAGATTGGTGTCCCATCTTT 2262
Query 2283 CCGGCTAGAACCGATGTTCCGCAGACGAGCC-CCAAAACTGCATGATATCTTAGAGAATG 2341
|||||||||||| ||||||| ||||| | | || ||||| |||||||| || |||||||
Sbjct 2263 CCGGCTAGAACCTTTGTTCCGAAGACG-GTCACCGAAACTTCATGATATTTTGGAGAATG 2321
Query 2342 TATTTTCAGGGCCT 2355
| ||||||||||||
Sbjct 2322 TGTTTTCAGGGCCT 2335
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117218272575
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5