BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg353659 Length=1020 Score E Sequences producing significant alignments: (Bits) Value AT5G37170.1 | Symbols: | O-methyltransferase family protein | ... 867 0.0 AT1G77520.1 | Symbols: | O-methyltransferase family protein | ... 676 0.0 > AT5G37170.1 | Symbols: | O-methyltransferase family protein | chr5:14712811-14714303 FORWARD LENGTH=1005 Length=1005 Score = 867 bits (469), Expect = 0.0 Identities = 616/686 (90%), Gaps = 13/686 (2%) Strand=Plus/Plus Query 341 GGACACATCTGAAGGATGTGATATTACAAGAAGAAAAAGATGCATTCAGCTCTGCCCATG 400 |||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||| Sbjct 327 GGACACATCTGAAGGATGTG--A-TACACGAAGAAAAAGATGCATTCAGTTCTGCCCATG 383 Query 401 ACATGAGACTCTTCGAATACATTGGGT-TGGACGAACAATTCGCTGGTATGTTAAACCAG 459 |||| |||||| ||||||| || || ||||||||||||||||| ||| || |||||| Sbjct 384 GCATGGGACTCTACGAATACGTT--GTACGGACGAACAATTCGCTGCTATATTTAACCAG 441 Query 460 GCAATGTCAGAATCTTCTACCATGATCATGAAGAAGATTTTCGAAGTTTACAAAGGATTC 519 ||||||||||| || |||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 442 GCAATGTCAGATTCCTCTACCATGATCATGACGAAGATTTTAGAAGTTTACAAAGGATTA 501 Query 520 AAAGATGTAAATACTTTAGTTGATATTGGGGGAGGACTTGGCACCATTCTAAATCTTGTC 579 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 502 AAAGATGTAAATACTTTAGTTGATATTGGAGGAGGACTTGGCACCATTCTAAATCTTGTC 561 Query 580 A---CTTCCAAGTATCCTCAAATTAAGGGTATCAATTTCGATCTAGCCACGGTATTAGCT 636 | | |||||||||||||||||||||||||||||||||||||||||| | || ||||| Sbjct 562 ATTTCGTCCAAGTATCCTCAAATTAAGGGTATCAATTTCGATCTAGCCGCAGTTTTAGCC 621 Query 637 AATGCTCCATT-TTATTCAGGAGTGGAGCATGTATCGGGAGATATGTTTATAGAAGTTCC 695 | |||||| || |||| | ||||| ||||||||| | ||||||||||||||||| ||||| Sbjct 622 ACTGCTCC-TTCTTATCCCGGAGTTGAGCATGTACCCGGAGATATGTTTATAGACGTTCC 680 Query 696 AAAAGGAGATGCAATCTTCATGAAATGGATATTACATGACTGGAACGACGAAGATTGTGT 755 ||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| Sbjct 681 AAAAGGAGATGCAATCTTCATGAGGCGGATATTACGTGACTGGAACGACAAAGATTGTGT 740 Query 756 AAAGAT-TCTAAAAAACTGTTGGAAGAGTCTTCCGGAAAAGGGAAAAGTGATAATAGTTG 814 |||||| | ||| ||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 741 AAAGATAT-TAACAAATTGTTGGAAGAGTCTTCCGGAAAAGGGAAAAGTTATAATAGTTG 799 Query 815 ATATGGTTACACCATCAGAACCAAAGAGTGACGACCTTTTCTCTAACATCGTCTTTGGTA 874 | |||||| |||||||||||||||||||||||||| |||||||||| | |||||||||| Sbjct 800 ACATGGTTGCACCATCAGAACCAAAGAGTGACGACATTTTCTCTAAGGTTGTCTTTGGTA 859 Query 875 TGGACATGTTGGTGTTGACACAATGTTCGGGTGGTAAAGTGAAGTCTTTTTCTCAGTTTG 934 |||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||||| Sbjct 860 CGGACATGTTGATGTTAACACAATGTTCGTGTGGTAAAGTGAGGTCTTTTGCTCAGTTTG 919 Query 935 AAGCTTTAGCCTCTGCTTCGGGGTTTCTTAAATGTGAAATCAGTGCTCTTGCTTATACAT 994 ||||||||||||||||||| || |||| |||||||||| | |||| |||||||||||||| Sbjct 920 AAGCTTTAGCCTCTGCTTCAGGTTTTCATAAATGTGAAGTAAGTGGTCTTGCTTATACAT 979 Query 995 ATTATGTTATCGAAATCCACAAGTAG 1020 ||| |||||||||| ||||||| ||| Sbjct 980 ATTCTGTTATCGAATTCCACAAATAG 1005 Score = 274 bits (148), Expect = 1e-72 Identities = 177/191 (93%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 61 GGCGTATGGCTCTCGTCTTCGGAGATAGCTTTTGGTCTCCCTACCAAACCCACCAACCCA 120 ||||||||||||||| |||| |||||||||||||||||||||||||| || ||||||||| Sbjct 139 GGCGTATGGCTCTCGCCTTCCGAGATAGCTTTTGGTCTCCCTACCAAGCCTACCAACCCA 198 Query 121 GAGGCGCCAATTTTGCTAGACCGTATGTTACGGTTACTCGTCAGCCACTCGATCTTGAAA 180 ||||| || || ||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 199 GAGGCACCGATGTTGATAGACCGTATGTTACGGTTACTCGTCAGCCACTCGATCTTGAAA 258 Query 181 TGTCGTATAGTTGAAACCGGAGAAAACGATCTAACCGGAAAG-ACCCAAAGGGTATATGC 239 |||||| |||||||||||||||||||| ||| ||||| |||| ||||||||||||||||| Sbjct 259 TGTCGTTTAGTTGAAACCGGAGAAAACAATCGAACCG-AAAGTACCCAAAGGGTATATGC 317 Query 240 AGCCGAACCGG 250 ||| ||||||| Sbjct 318 AGCGGAACCGG 328 > AT1G77520.1 | Symbols: | O-methyltransferase family protein | chr1:29130403-29132180 FORWARD LENGTH=1473 Length=1473 Score = 676 bits (366), Expect = 0.0 Identities = 829/1045 (79%), Gaps = 61/1045 (6%) Strand=Plus/Plus Query 1 ATGGTTTTCAAAGCTGCCTTGGAGCTTGGCGTCCTCGACACGAT---TGTTGCCGTTGAC 57 |||||| ||||||| ||||| |||||||||||| ||||||| || || ||| | || Sbjct 284 ATGGTTCTCAAAGCCGCCTTCGAGCTTGGCGTCATCGACACCATCGCTGCTGCAGGAAAC 343 Query 58 GACGGCGTATGGCTCTCGTCTTCG-GAGATAGCTTTTGGTCTCCCTACCAAACCCACCAA 116 ||| || |||||||| | | | |||||||| | | ||||||| |||||||||||||| Sbjct 344 GAC-ACG--TGGCTCTCACCGT-GTGAGATAGCGTGTAGTCTCCCAACCAAACCCACCAA 399 Query 117 CCCAGAGGCGCCAATTTTGCTAGACCGTATG-TTACGGTTACTCGTCAGCCACTCGATCT 175 ||| |||||||| | ||||| ||||| ||| | | | ||||| |||||||||||||||| Sbjct 400 CCCGGAGGCGCCGGTGTTGCTTGACCGGATGCTGA-GCTTACTTGTCAGCCACTCGATCT 458 Query 176 TGAAATGTCGTATAG-TTGAAACCGGAGAAAACGATCTAACCGGAAAGACCCAAAGGGTA 234 |||| || ||||| | ||||||||||||| |||| || ||||||||||| | | |||||| Sbjct 459 TGAAGTGCCGTAT-GATTGAAACCGGAGAGAACGGTCGAACCGGAAAGATCGAGAGGGTA 517 Query 235 TATGCAGCCGAACCGGTTTGCAAGT-TTTTCTT-A-A-ACCGTGGTG-TCAAGTCAGGTT 289 ||||||||||||||||||||||||| |||| || | | | ||| || | | |||| | Sbjct 518 TATGCAGCCGAACCGGTTTGCAAGTATTTT-TTGAGAGATAGTGATGGT-A---CAGGAT 572 Query 290 CTCTCACGTCC-CTATTCATGTTGCTCCAAAGCCAAGTCTTTTTCAAAACTTGGACACAT 348 ||||| | || || |||||||||||||| | |||||| |||||||| ||||||||| || Sbjct 573 CTCTCGTG-CCTCTGTTCATGTTGCTCCATACCCAAGTGTTTTTCAAGACTTGGACAAAT 631 Query 349 CTGAAGGATGTGATATTACAAGAAGAAAAAGATGCATTCAGCTCTGCCCATGACATGAGA 408 || || ||||||||| || ||| ||| | |||||||||| ||||||||| | ||||| | Sbjct 632 CTTAAAGATGTGATACTAGAAG--GAAGA-GATGCATTCAACTCTGCCCACGGCATGAAA 688 Query 409 CTCTTCGAATACATTGGGTT-GGA-CGAACAATTCGCTG-GTATGTTAAACCAG-GCAAT 464 ||||||||||||| || ||| | ||| ||| |||| || |||| || | | ||||| Sbjct 689 ATCTTCGAATACATAAA-TTCGGATC-AACCATTTGCTGAGT-TGTTTAATC-GTGCAAT 744 Query 465 GTCAGAATCTTCTACCATGATCATGAAGAAGATTTTCGAAGTTTACAAAGGATTCAAAGA 524 ||| ||| |||| |||||||||||||||||| || | || || || | |||||| |||| Sbjct 745 GTCGGAACCTTCCACCATGATCATGAAGAAGGTTCTAGACGTATATAGAGGATTTGAAGA 804 Query 525 TGTAAATACTTTAGTTGATATTGGGGGAGGACTTGGCACCATTCTAAATCTT-GTCACTT 583 ||| || ||||| || ||| |||| |||||| |||||| || || | || ||||||| Sbjct 805 TGTTAACACTTTGGTGGATGTTGGAGGAGGAAATGGCACTGTTTTAGGT-TTAGTCACTT 863 Query 584 CCAAGTATCCTCAAATTAAGGGTATCAATTTCGATCT-AGC-CACGGTATTAGCT-AATG 640 | ||||||||||| || || ||| | |||||||| || ||| || | | ||| | || | Sbjct 864 CTAAGTATCCTCATATCAAAGGTGTTAATTTCGA-CTTAGCTCAAGTT-TTAACCCAA-G 920 Query 641 CTCCATTTTATTCAGGAGTGGAGCATGTATCGGGAGATATGTTTATAGAAGTTCCAAAAG 700 |||| |||||| ||||||| ||||||||||| ||||| |||||| ||||||||||||| | Sbjct 921 CTCCTTTTTATCCAGGAGTCGAGCATGTATCTGGAGACATGTTTGTAGAAGTTCCAAAGG 980 Query 701 GAGATGCAATCTTCATGAAATGGATATTACATGACTGGA-ACGACGAAGATTGTGTAAAG 759 ||||||| |||| |||||||||||| ||||||| ||| | ||||| |||||| ||||| Sbjct 981 GAGATGCCGTCTTTATGAAATGGATACTACATGATTGGGGA-GACGAGGATTGTATAAAG 1039 Query 760 ATTCTAAAAAACTGTTGGAAGAGTCTTCCGGAAAA-GGGAAAAGTGATAATAGTTGA-TA 817 ||||| ||||| |||||||| ||||| |||||||| ||||| | | || || || || | Sbjct 1040 ATTCTGAAAAATTGTTGGAAAAGTCTACCGGAAAAAGGGAAGATT-ATTATTGTAGAGTT 1098 Query 818 TGGTTACACCATCAG-AACCAAAGAGTGACGACCTTTTCT-CTAACA-TCGTCTTTGGTA 874 || |||||||| || |||||||| ||| ||| || ||| |||||| | ||||||| | Sbjct 1099 TG-TTACACCAA-AGGAACCAAAGGGTGGTGAC-TTATCTTCTAACACT-GTCTTTGCCA 1154 Query 875 TGGACATGTTGGTGTTGACACAATGTTCGGGTGGTAAAGTGA-AGTCTTTTTCTCAGTTT 933 ||||| ||||| |||| || ||||| || |||||||||| || | ||| |||| ||||| Sbjct 1155 TGGACTTGTTGATGTTAACCCAATGCTCTGGTGGTAAAGAGAGA-TCTCTTTCACAGTTC 1213 Query 934 GA-AGCTTTAGCCTCTGCTTCGGGGTTTCTTAAATGTGAAATCAGT-GCTCTTGCTTATA 991 || | ||| || | ||| || || |||||| ||||||||||| | | |||||||||| Sbjct 1214 GAGAA-TTTGGCGTTTGCGTCAGGTTTTCTTCGATGTGAAATCATTTG-TCTTGCTTATT 1271 Query 992 CATATTATGTTATCGAAATCCACAA 1016 | |||| |||||||||| ||||||| Sbjct 1272 CGTATTCTGTTATCGAATTCCACAA 1296 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 49982976265 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5