BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg353664
Length=2739
Score E
Sequences producing significant alignments: (Bits) Value
AT4G31615.1 | Symbols: | Transcriptional factor B3 family prot... 2063 0.0
AT4G31620.1 | Symbols: | Transcriptional factor B3 family prot... 1441 0.0
> AT4G31615.1 | Symbols: | Transcriptional factor B3 family protein
| chr4:15320297-15322194 REVERSE LENGTH=1464
Length=1464
Score = 2063 bits (1117), Expect = 0.0
Identities = 1301/1389 (94%), Gaps = 15/1389 (1%)
Strand=Plus/Plus
Query 1363 ATGATTCCTGCTGAGtttttttCGACTTACGTAGAAGGT-AAAA--ACCAGTCTACAAAA 1419
|||||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||
Sbjct 79 ATGATTCCTGCTGAGTTTTTTTCGACTTACGTGGAAGGTAAAAACCACCAGTCTACAAAA 138
Query 1420 CTGAAACTGACCTCGGACGCTTTGGATAGAACCTGGGAAGTGAAATTGAACGGCCGCAGA 1479
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 139 CTGAAACTGACCTCGGACGCTTTCGATAGAACCTGGGAAGTGAAATTGAACGGCCGCAGA 198
Query 1480 TTCGCCCGCGGCTGGGAAAATTTCTCCACCGTACACTCTCTCCAAGACGACGACGTTTTG 1539
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 199 TTCGCCGGCGGCTGGGAAAATTTCTCCACCGTACACTCTCTCCAAGATGACGACGTTGTG 258
Query 1540 ATTTTCAGGGAAATCGGGGACATGACCTTTCACGTCACAGCCTCCGGTCGCAGTTTCTGT 1599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 259 ATTTTCAGGGAAATCGGGGACATGACCTTTCACGTCACAGCCTCCGGTCGCAGTTTCTGT 318
Query 1600 AAGGTACAGTACATATCCTCTGACGAGGATGGGGCTGATGAAGATGATGCATGGACCGAG 1659
||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| || |
Sbjct 319 AAGTTACAGTACATATCCTCTGACGAAGATAGGGCTGATGAAGATGATGCATGGAACGTG 378
Query 1660 TATTCAGATTCCAAAAACATTGCGTCGAAGAAGAAGCCAAGAACAGAAGCAAAGTCTTCA 1719
|||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||
Sbjct 379 TATTCAGATTCCAAGAACATTGTGTCGAAGAAGAAGCCAAGAACAGAAGCAGAGTCTTCA 438
Query 1720 TCCAAAAACTCTTATCTTGTTGCGCACGTCACGTCTTCAAACCTAAGCCGAGATAGATTG 1779
|||||||||| ||||||||||||||| |||||| |||| |||||||||||||||||||||
Sbjct 439 TCCAAAAACTATTATCTTGTTGCGCATGTCACGCCTTCGAACCTAAGCCGAGATAGATTG 498
Query 1780 TCTCTTATAAAGGGTTTTGCGAGGTCAAATGGCCTGAACCAGAGATGCTGTGAGATTGAT 1839
| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 499 TATCTTATAAAGGCTTTTGCGAGGTCAAATGGCCTGAACGAGAGATGCTGTGAGATTGAT 558
Query 1840 CTAATGAATCAACATGGAAAATCATGGACAGTTGGTCTGAGATACAGTACAG-CAAATGA 1898
||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||| |||
Sbjct 559 CTAATGAATAAACATGGAAAATCATGGACACTTGGTCTGAGATACAGTACAGTCAA-TGA 617
Query 1899 GCAGGCTAGTATTAGTGGAGGCTGGAGAGACTTCTGCTTAGCAAATGGGTTAGAAGCTGG 1958
||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 618 TCAGGCTAGTATCAGTGGAGGCTGGAGAGACTTCTGCTTAGTAAATGGGCTAGAAGCTGG 677
Query 1959 ATCTTTCTACAGGTTTAAGCTTGTCCAAAACGGGGCAAGGCCTTTGCTACGGTTGTGTTC 2018
||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 678 ATCATTCTACAGGTTTAAGCTTGTCCAAAACGGGGAAAGGCCTTTACTACGGTTGTGTTA 737
Query 2019 CGAAACTATTCCAGAAGAAGACTGTTACAAAGGAAACAGAAAGGA-AATTTTTTCAGAGA 2077
||| |||||||||||||||||||||||||||||||||||||| | ||| ||| ||||||
Sbjct 738 CGACACTATTCCAGAAGAAGACTGTTACAAAGGAAACAGAAAAGTTAATCTTT-CAGAGA 796
Query 2078 GTGCTTCAATGAAGCAGAGCAAGTTTTTGACAATGACCTTTAAGCCTTACATGCTCAAGT 2137
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 797 GTGCTTCAATGAAGCAGGGCAAGTTTCTGACAATGACCTTTAAGCCTTACATGCTCAAGT 856
Query 2138 CAGGTCAACTTCATATTTCGAGACCCTTTGCTATAGAGAATGAAATTAAGGAAGCAGAAG 2197
|||||||||||| | | |||||||||||||| |||||||||||||| ||||| ||||| |
Sbjct 857 CAGGTCAACTTCGTCTCTCGAGACCCTTTGCAATAGAGAATGAAATAAAGGAGGCAGAGG 916
Query 2198 ATATAACTCTAGTGGACAAAAATGGAGGAAACTGGCCATCCTATGTAGCTTCTGGTGATG 2257
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 917 ATATAACACTAGTGGACAAAAATGGAGGAAACTGGCCATCCTATGTAGCTTCTGGCGATG 976
Query 2258 GTCAAGGAGGAAAGTATTATTTGGCAAAAGGTTGGAGAGGTTTTTGTGCAGCCAATAGGT 2317
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 977 GTCAAGGAGGAAAGTATTATTTGGCAAAAGGTTGGAGAAGTTTTTGTGCAGCCAATAGGT 1036
Query 2318 TAAAGACGGGAGAGACCTTCACGTTGGAGTTTGTTCGAGGAGAAAGCACAACTCCAATGC 2377
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1037 TAAAGACGGGAGAGACCTTCACGTTGGAGTTTGTTCGAGGAGAAGGCACAACTCCAATGC 1096
Query 2378 TCAAGTTCTGCTCCAAGACCAAG-A-----TAGAACAAGTACCATTAGATGAAGAAAGAG 2431
| ||||||||||||||| ||||| | |||||||||||||||| ||||||| | | |
Sbjct 1097 TAAAGTTCTGCTCCAAGTCCAAGGACAAGATAGAACAAGTACCATTTGATGAAGGAGGGG 1156
Query 2432 AGACTCAAGAAGAAACGGAGACTCGGGTCGAAAAGAGAGCTCGAGTTTCTGCAGGAGGAG 2491
|||||||||||||||| |||||| ||||| |||||||||||||||||||||||| | |||
Sbjct 1157 AGACTCAAGAAGAAACAGAGACTAGGGTCAAAAAGAGAGCTCGAGTTTCTGCAGAAAGAG 1216
Query 2492 GATCTTCACGCCGCAATCAGGCATCAAACAAACCCAATGCTGATCCACAAAACTTGAAGC 2551
||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||
Sbjct 1217 GATCTTCTCGCCGCAATCAGGCATCAAATAAACCCAATGCTGATCCACAAAACTTGCAGC 1276
Query 2552 CTAGGCAACCACCTTGCTCAATCTCTGATCGAGTGCAAAAGGTGAAACAGATTATTGAGG 2611
|| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1277 CTGGGCAACCACATTGCTCAATCTCTGATCAAGTGCAAAAGGTGAAACAGATTATTGTTG 1336
Query 2612 ACACTTTAACCGGGGTAAAACGGATTCGGTCAGAGCTTGAA-GTAAAGGAACAGAATTTA 2670
|||||||||||||| |||||||||||||||||||||| ||| | ||||| ||| || |||
Sbjct 1337 ACACTTTAACCGGGATAAAACGGATTCGGTCAGAGCTAGAAAG-AAAGGGACAAAAGTTA 1395
Query 2671 GAAGCTTCGATATTGGAAATTGATGCTTTAGGGGAGAAAGTGTTGGAAATCAACAAAATC 2730
|||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1396 GAAGCTTCGATACTGGAAATTGATGCTTTAGGGGAGAAAGTGTCGGAAATCAACAAAATC 1455
Query 2731 CTCAAGTAA 2739
|||||||||
Sbjct 1456 CTCAAGTAA 1464
> AT4G31620.1 | Symbols: | Transcriptional factor B3 family protein
| chr4:15322452-15324681 REVERSE LENGTH=1809
Length=1809
Score = 1441 bits (780), Expect = 0.0
Identities = 1001/1101 (91%), Gaps = 41/1101 (4%)
Strand=Plus/Plus
Query 278 TGAGTTTTTCAAAACATTTTTCGAGAACAAATGGTTTGACCAAGAGATGGTGTGTGATTG 337
|||||||| ||||||||||||||||| ||||||||||||| |||||||| ||| ||||||
Sbjct 529 TGAGTTTTACAAAACATTTTTCGAGAGCAAATGGTTTGACGAAGAGATGTTGTATGATTG 588
Query 338 ATCTAATGAATCTAAGTGGGGAATCATGGGCTCTGGGCCTGCGACACAACAACAGAACTG 397
||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||
Sbjct 589 ATCTAATGAATCTAAGTGGGGAATCATGGACTCTGGGTCTGCGACACAACAAAAGAACTG 648
Query 398 GTCAGGATTATATCCGTGGACACTGGAGAAGTTTCTGCCGTGCAAATGAGATGAAACCCG 457
|||||| || ||||||||||| ||||||||||||||||| |||||||||| |||||||||
Sbjct 649 GTCAGGCTTTTATCCGTGGACGCTGGAGAAGTTTCTGCCATGCAAATGAGCTGAAACCCG 708
Query 458 GATC-TTCCTACCGGTTTAAGCTTGTCCGGAATGGGACAAGGCCTTTGCTACGGTTGTGT 516
|||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 709 GATCGTT-CTACCGGTTTAAGCTTGTCCGGAATGGGACAAGGCCTTTGCTACAATTGTGT 767
Query 517 TCTGAAGTTATTCCAGAAGGAAA-----CC-GTTCCAGAGCAAATGGAAAAGATAATGTT 570
| | ||||||||||| ||||||| || ||||| |||||||||||||| |||||||
Sbjct 768 TTTAAAGTTATTCCACAAGGAAACTGTTCCAATTCCAAAGCAAATGGAAAAGCTAATGTT 827
Query 571 TCGGAAAAGTATAGCAGGGCAGCTGGGAGTGCTTCAACGAAGCAGAACAAGTTTCTGACC 630
|| |||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 828 TCTGAAAAGTATAGCAGGGAAGATGGGAGTGCTTCAACGAAGCAGAACAAGTTTCTGACA 887
Query 631 GTAACCTTTAAGCATTACATGATCCAGTCAGGACACCTTCGTCTTCC-GAGATCATTTGC 689
|||||||| ||||||||||||||||||||||| || ||||||| ||| |||||||||||
Sbjct 888 GTAACCTTGAAGCATTACATGATCCAGTCAGGGCAACTTCGTC-TCCGGAGATCATTTGT 946
Query 690 GAGGGAGAACGGGATCAAGGAGGCAGAAGAGATAATTCTAGTGGACAAAAATGGAGTAAA 749
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 947 GAGGGAGAACGGGATCAAGGAGGCTGAAGAGATAATTCTAGTGGACAAAAATGGAGTAGA 1006
Query 750 GTGGCCATCCTATGTAGT-TTCTTCCAAACAACGAGGAGAGTTTTACATGGCACATGGTT 808
|||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1007 GTGGCCATCCTATGTA-TCTTCTTCCAAACAACGAAGAGAGTTTTACATGGCACATGGTT 1065
Query 809 GGAAAAGGTTTTGTGAAGCCAATAAGTTAAACACGGGAGACACCTTCACTTTGGAGTTTG 868
||| |||||||||||||||||||||||||| |||||||| |||||||| ||||||||||
Sbjct 1066 GGATTAGGTTTTGTGAAGCCAATAAGTTAAAGACGGGAGAGACCTTCACGTTGGAGTTTG 1125
Query 869 TTCGAGGAGAAGGCGCAACTCCTATGCTCAAGTTCTGCTCCAAGGCCAAGGTCAAGATAG 928
|||||||||||||| |||||||||||||||||||||||||| | ||| ||||||||
Sbjct 1126 TTCGAGGAGAAGGCACAACTCCTATGCTCAAGTTCTGCTCC---G---AGGCCAAGATAG 1179
Query 929 AACAAGAAGAGGCTCCAGAAGAGACGGAGACTCCGTTTCAAAAGAGAGCTCGAGTGTCTG 988
| |||||||||||||||||||||| || ||||||||| | ||||||||||||||||||||
Sbjct 1180 AGCAAGAAGAGGCTCCAGAAGAGAGGGGGACTCCGTTACCAAAGAGAGCTCGAGTGTCTG 1239
Query 989 CAGAAGTAGGACACTCTCGTCGCACTCAGACACCAAACAAAGCCAGTCATGATCCAAAAA 1048
||||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||||||
Sbjct 1240 CAGAAGTAGGACACTCTCGTCGCACTCAGGCACCAAACAAATCCAGTGACGATCCAAAAA 1299
Query 1049 TCTTGCAGCGCAAGCAACCACTTCAACCCTGCTCATTCTCTGACCAAGCGAAAAAGGTGA 1108
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1300 TCTTGCAGCGCAAGCAACCACTTCAACCCTGCTCATTCTCTGATCAAGCGAAAAAGGTGA 1359
Query 1109 AACAGAGTATTGTAAACATTTTAACTGGTATAAAACGGTTTCGGTCAGAGCTCGAGATAA 1168
|||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||
Sbjct 1360 AACAGAGTATTGTAAACATTCTAACTGGTATAAAACGGTTTCGGTCAGAGCTTGAGTTAA 1419
Query 1169 AGGAGCAGAGTTTAGAAGCTGCGCTGCTGGAAATCGACGCCTTAGTGTTGAATATAAACA 1228
|||||| || ||||||||||||||||||||||||||||||||||| | || || ||
Sbjct 1420 AGGAGCGGAATTTAGAAGCTGCGCTGCTGGAAATCGACGCCTTAGGG--GA-TA-AA--- 1472
Query 1229 GGGGAGAAAGTATCGGAAATCAACAAAATCCTCAAGTAATCATCAAGTCTAGAAGTGAAG 1288
| ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1473 G---------TATCGGAAATCAACAAAATCCTCAAGTAATCATCAAGTCTAGAAGGGAAG 1523
Query 1289 TGAAGATTAGGAAATGGAACATGAACTTTTGCAAACCTTGTTTGTATCT---A---G-AA 1341
||||||||||||||||||||||||||||||||||| |||||| |||||| | | ||
Sbjct 1524 TGAAGATTAGGAAATGGAACATGAACTTTTGCAAATCTTGTTAGTATCTGCCATCTGGAA 1583
Query 1342 CTCGTTCAACAATCGAGACAA 1362
|||||||||||||| ||||||
Sbjct 1584 CTCGTTCAACAATCAAGACAA 1604
Score = 614 bits (332), Expect = 2e-174
Identities = 1107/1459 (76%), Gaps = 141/1459 (10%)
Strand=Plus/Plus
Query 1362 AATGATTCCTGCTGAGtttttttC-GACTTACGTAGAAGGTAAAAACCAGTC-T-ACAAA 1418
||| ||||||| ||||||||| | | || || |||| ||| |||| | | | | || ||
Sbjct 104 AATAATTCCTGATGAGTTTTTCACTG-CTCACTTAGAGGGT-AAAA-CTGGCTTAACGAA 160
Query 1419 ACTGAAACTGACCTCGGACGCTTTGGATAGAACCTGGGAAGTGAAATTGAACGGCCGCAG 1478
| |||||||||| || || |||| |||||||| |||||| |||| | |||||||||| ||
Sbjct 161 ATTGAAACTGACTTCTGATGCTTCGGATAGAATCTGGGATGTGAGACTGAACGGCCGGAG 220
Query 1479 ATTCGCCCGCGGCTGGGAAAATTTCTCCACCGTACACTCTCTCCAAGACGACGACGTTTT 1538
||||||| |||||||||| |||||||| ||| ||||| ||| | |||||||||||||||
Sbjct 221 ATTCGCCGGCGGCTGGGATGATTTCTCCGCCGCACACTGTCTTCGAGACGACGACGTTTT 280
Query 1539 GATTTTCAGGGAAATCG--G-GGACATGACCTTT-CACGTCACAGCC-TCCGGTCGCAGT 1593
| |||||| | | ||| | | | ||| ||| ||||||||| || ||||| ||||||
Sbjct 281 GGTTTTCA--G-ACTCGACGTGAAGATG-GTTTTCCACGTCACA-CCTTCCGGACGCAGT 335
Query 1594 TTCTGTA-AGGTACAGTACAT-ATC---CT-C--TGACGA-G-GA-TGGGGCTGATGAAG 1642
|||| | || ||| |||||| || || | ||| | | | || | |||||| |
Sbjct 336 TTCT-CACAGATAC-GTACATCTTCTAGCTCCGGCGACTACGACAGTGATGATGATGATG 393
Query 1643 ATGATGCA-TGGACCGAGT-ATTCAGATTCCAAAAACATTGCGTCGAAGAAGAAGCCAAG 1700
|||| ||| ||| ||| | |||||||||| || |||||| ||| ||||||||| ||||
Sbjct 394 ATGAAGCAGGGGA-CGA-TGATTCAGATTCGAAGAACATTTCGTTGAAGAAGAAATCAAG 451
Query 1701 AACAGAAGCAAAG---TCTTCATC-CAAAAACTCTTATCTTGTTGCGCACGTCACGT-CT 1755
| |||||| || |||||||| ||||| | || |||| | | || | |||| | ||
Sbjct 452 ATTTGAAGCAGAGTCTTCTTCATCGGAAAAA-TATTGTCTTCTCG-GC-C-TCAC-TGCT 506
Query 1756 TCAAACCTAAGCCGAGATAGATTGTCTCTTATAAAGGGTTTTGCGAG-GTCAAATGGCCT 1814
|| |||||| ||| | || || || | ||| ||| |||| |||| | ||||||| |
Sbjct 507 TCCAACCTACGCCTAAATCGAGTGAGTTTTACAAAACATTTTTCGAGAG-CAAATGGTTT 565
Query 1815 GAAC-CAGAGATGCTGTGA-GATTGATCTAATGAATC-AACATGGAAAATCATGGACAGT 1871
| || ||||||| ||| | ||||||||||||||||| || ||| |||||||||| |
Sbjct 566 G-ACGAAGAGATGTTGT-ATGATTGATCTAATGAATCTAA-GTGGGGAATCATGGACTCT 622
Query 1872 TGGTCTGAGATAC-AGTACAGCAAATGAG-CAGGCTAGTATTAGTGGAGGCTGGAG-AGA 1928
|||||| || || | | || || || | |||||| ||| ||||| ||||||| ||
Sbjct 623 GGGTCTGCGACACAACAAAAG-AACTG-GTCAGGCTTTTATCCGTGGACGCTGGAGAAG- 679
Query 1929 CTTCTG-CTTAGCAAATG-GGTTAGAAGCTGGATCTTTCTACAGGTTTAAGCTTGTCCAA 1986
||||| | | ||||||| | | | || | ||||| |||||| |||||||||||||||
Sbjct 680 TTTCTGCCAT-GCAAATGAGCTGA-AACCCGGATCGTTCTACCGGTTTAAGCTTGTCCGG 737
Query 1987 AACGGGGCAAGGCCTTTGCTACGGTTGTGTTCCGAAA-CTATTCCAGAA-GAAGACTGTT 2044
|| ||| ||||||||||||||| ||||||| ||| ||||||| || ||| ||||||
Sbjct 738 AATGGGACAAGGCCTTTGCTACAATTGTGTT-TTAAAGTTATTCCACAAGGAA-ACTGTT 795
Query 2045 ---A---CAAAGGAAACAG-AAAG-GAA-ATTT-T------T-T--C-----AGA---GA 2077
| ||||| ||| | |||| || ||| | | | | ||| ||
Sbjct 796 CCAATTCCAAAGCAAATGGAAAAGCTAATGTTTCTGAAAAGTATAGCAGGGAAGATGGGA 855
Query 2078 GTGCTTCAATGAAGCAGAGCAAGTTTTTGACAATGACCTTTAAGCCTTACATGCTCAAGT 2137
||||||||| |||||||| ||||||| ||||| | ||||| |||| ||||||| || |||
Sbjct 856 GTGCTTCAACGAAGCAGAACAAGTTTCTGACAGTAACCTTGAAGCATTACATGATCCAGT 915
Query 2138 CAGGTCAACTTCATATTTC-GAGACCCTTTGCT-ATAGAGAATGAAATTAAGGAAGCAGA 2195
|||| ||||||| | | | |||| | |||| | | ||||| | || ||||| || ||
Sbjct 916 CAGGGCAACTTCGT-CTCCGGAGATCATTTG-TGAGGGAGAACGGGATCAAGGAGGCTGA 973
Query 2196 AGATATAACTCTAGTGGACAAAAATGGAGGAAACTGGCCATCCTATGTAGCTTCTGGTGA 2255
||| |||| |||||||||||||||||||| | | ||||||||||||||| ||||| |
Sbjct 974 AGAGATAATTCTAGTGGACAAAAATGGAGTAGAGTGGCCATCCTATGTATCTTCT--T-C 1030
Query 2256 TGGTCAAGGAGGAAAGTATTATTTGGCAAAAGGTTGGA-GAGGTTTTTGTGCAGCCAATA 2314
||| || || ||| ||| ||||| | ||||||| ||| ||||||| ||||||||
Sbjct 1031 CAAACAACGAAGAGAGTTTTACATGGCACATGGTTGGATTAGG-TTTTGTGAAGCCAATA 1089
Query 2315 GGTTAAAGACGGGAGAGACCTTCACGTTGGAGTTTGTTCGAGGAGAAAGCACAACTCCAA 2374
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct 1090 AGTTAAAGACGGGAGAGACCTTCACGTTGGAGTTTGTTCGAGGAGAAGGCACAACTCCTA 1149
Query 2375 TGCTCAAGTTCTGCTCCAAGACCAAGATAGAACAAGTACCATTAGATGAAGAAAGAGAGA 2434
||||||||||||||||| || |||||||||| | | | ||| | || | |
Sbjct 1150 TGCTCAAGTTCTGCTCCGAGGCCAAGATAGA----G--C-A--AGA--A-GA--G-G--- 1191
Query 2435 CTCAAGAAGAAACGGAGACTCGGGT-CGAAAAGAGAGCTCGAGTTTCTGCAGGAGGAGGA 2493
||| |||||| | || ||||| | | | ||| |||||||||||| ||||||| || ||||
Sbjct 1192 CTCCAGAAGAGAGGGGGACTCCGTTACCAAA-GAGAGCTCGAGTGTCTGCAGAAGTAGGA 1250
Query 2494 T-CTTCACGCCGCAATCAGGCATCAAACAAACCCAATG-CTGATCCACAAAA-CTTGAAG 2550
|| | || |||| ||||||| |||||||| ||| || | |||||| |||| |||| ||
Sbjct 1251 CACT-CTCGTCGCACTCAGGCACCAAACAAATCCAGTGAC-GATCCA-AAAATCTTGCAG 1307
Query 2551 C-CTAGGCAACCACCT------TGCTCAATCTCTGATCGAGTGCAAAAGGTGAAACAGAT 2603
| | || ||||||| | |||||| ||||||||| || | |||||||||||||||
Sbjct 1308 CGCAAG-CAACCACTTCAACCCTGCTCATTCTCTGATCAAGCGAAAAAGGTGAAACAGAG 1366
Query 2604 TATTG-AGGACACTT-TAACCGGGGTAAAACGGATTCGGTCAGAGCTTGAAGT-AAAGGA 2660
||||| | ||| || |||| || |||||||| |||||||||||||||| || ||||||
Sbjct 1367 TATTGTAA-ACA-TTCTAACTGGTATAAAACGGTTTCGGTCAGAGCTTGA-GTTAAAGGA 1423
Query 2661 ACAGAATTTAGAAGCTTCGATATTGGAAATTGATGCTTTAGGGGAGAAAGTGTTGGAAAT 2720
| ||||||||||||| || | ||||||| || || |||||||| ||||| | ||||||
Sbjct 1424 GCGGAATTTAGAAGCTGCGCTGCTGGAAATCGACGCCTTAGGGGATAAAGTATCGGAAAT 1483
Query 2721 CAACAAAATCCTCAAGTAA 2739
|||||||||||||||||||
Sbjct 1484 CAACAAAATCCTCAAGTAA 1502
Score = 424 bits (229), Expect = 3e-117
Identities = 263/279 (94%), Gaps = 3/279 (1%)
Strand=Plus/Plus
Query 8 ATCCACTATCTTCTTCTCAATCCAACCGACCTTTCTTCGTCAGATCACTTGCTGGACACA 67
|||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 34 ATCCACTATCTTCTTCTCGATCCAACCGACCTTTTTTCGTCAGATCACTTGCTGGACACA 93
Query 68 ACTCGAATCTAATAATTCCTGATGCGTTTTTCACGGCTCACTTGA-AGGATAAAACTGGC 126
||| ||||||||||||||||||| ||||||||| |||||||| | ||| ||||||||||
Sbjct 94 CCTCAAATCTAATAATTCCTGATGAGTTTTTCACTGCTCACTT-AGAGGGTAAAACTGGC 152
Query 127 TTAACGAAATTGAAACTGACTTCTGACGCTTCGGATAGAACCTGGGATGTGAAACTGAAC 186
|||||||||||||||||||||||||| ||||||||||||| ||||||||||| |||||||
Sbjct 153 TTAACGAAATTGAAACTGACTTCTGATGCTTCGGATAGAATCTGGGATGTGAGACTGAAC 212
Query 187 GGCCGGAGATTCGCCGGCGGCTGGGATGATTTCTCCGCCGCACACTGTCTTCGAGACGAC 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 213 GGCCGGAGATTCGCCGGCGGCTGGGATGATTTCTCCGCCGCACACTGTCTTCGAGACGAC 272
Query 247 GACGTTTTGGTTTTCAGACACGACGGGAAAATGAGTTTT 285
||||||||||||||||||| ||||| ||| ||| |||||
Sbjct 273 GACGTTTTGGTTTTCAGACTCGACGTGAAGATG-GTTTT 310
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 136052749416
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5