BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg353690

Length=855
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G01560.1 | Symbols: LECRKA4.3 | lectin receptor kinase a4.3 ...   100    2e-20


> AT5G01560.1 | Symbols: LECRKA4.3 | lectin receptor kinase a4.3 
| chr5:218138-220530 REVERSE LENGTH=2393
Length=2393

 Score =  100 bits (54),  Expect = 2e-20
 Identities = 62/66 (94%), Gaps = 0/66 (0%)
 Strand=Plus/Plus

Query  664   GATGTCCCTGAGATTGAAGACAATTGGGGATATTCAGATTCTTCAAGAACCGATTTAGGA  723
             ||||| ||||||||| | |||||||||||||||||||||||||||||||| |||||||||
Sbjct  2194  GATGTTCCTGAGATTCACGACAATTGGGGATATTCAGATTCTTCAAGAACAGATTTAGGA  2253

Query  724   TCGAAA  729
             ||||||
Sbjct  2254  TCGAAA  2259



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 41694342010


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5