BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg353897
Length=1974
Score E
Sequences producing significant alignments: (Bits) Value
AT4G29050.1 | Symbols: | Concanavalin A-like lectin protein ki... 1724 0.0
AT1G70130.1 | Symbols: | Concanavalin A-like lectin protein ki... 549 4e-155
> AT4G29050.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr4:14314818-14316879 REVERSE LENGTH=2062
Length=2062
Score = 1724 bits (933), Expect = 0.0
Identities = 1354/1547 (88%), Gaps = 69/1547 (4%)
Strand=Plus/Plus
Query 1 ATG-AATTTGTTTGTACTAGTGCTTCTTCTTTTGTTGCAATTCTCCTCCAACAAAGCAGT 59
||| ||||| |||||||||||||||||||| || ||||||||| ||||||||||||| |
Sbjct 1 ATGAAATTT-TTTGTACTAGTGCTTCTTCTGGTGCTGCAATTCTTCTCCAACAAAGCACT 59
Query 60 TTCTGAGAGTGAAGAAGAAGGAGAGTTTGGCTTCAATGGTTACTTATACAACAGCTATGG 119
|||| ||||| ||||||||||||||||| || ||||||||||| ||| ||| || |||
Sbjct 60 TTCTCAGAGT---GAAGAAGGAGAGTTTGGTTTTAATGGTTACTTGTACGACAACTCTGG 116
Query 120 AACTGCCAA-T-CTTGACTCCAATGGCTT-ATTGAAGCTTTCAAACTAC-AC-G-GTACA 173
|| || ||| | | | ||||||| ||||| | ||||||| |||| | | | | | |
Sbjct 117 AATTG-CAATTAC-TAACTCCAAAGGCTTGA-TGAAGCTCACAAA-TTCGTCTGAATTC- 171
Query 174 AAAAACTGGTCAAGTTTTCTACAACT-TACCAG-TACGGTTCAAGAACTCACCAAACGCT 231
| | |||||| ||||||||||||| | |||| || | ||||||||||||||||||| |
Sbjct 172 TCATA-TGGTCACGTTTTCTACAACTCT-CCAGTTA-GATTCAAGAACTCACCAAACGGT 228
Query 232 ACCGTTTCGTCCTTCTCCACTACATTTGTTTTCGCTATAGTTTCTCAGAT-TCCAA--CT 288
||||||||||| ||||||||||| ||||||||||||||||| ||| | || | || |
Sbjct 229 ACCGTTTCGTCTTTCTCCACTACCTTTGTTTTCGCTATAGTCTCT-A-ATGT-TAATGCA 285
Query 289 CTTAG-TGGCCATGGAATTGCTTTTGCT-ATCTGTCCCACCAAAGGCTTGCCCTAT-GCT 345
||| | |||||||||| |||| |||| | |||| |||||||||||||||||||||| | |
Sbjct 286 CTT-GATGGCCATGGACTTGCATTTG-TCATCTCTCCCACCAAAGGCTTGCCCTATAG-T 342
Query 346 ACACCCTCACAATATCTTGGGCTCTTTAATATCTCAAACAATGGAAATTTCTCAAATCAT 405
|| ||||||||||||| |||||||||||| | ||||||||||| || ||| ||||||
Sbjct 343 TCATCCTCACAATATCTAGGGCTCTTTAATTTGACAAACAATGGAGATCCCTCTAATCAT 402
Query 406 GTTGTAGCAGTTGAGTTTGATACA-ATCCTAAGCACTGAATTTAGA-GACATAGATGACA 463
||||||||||||||||||||||| || || || |||||| || ||||| ||| | |
Sbjct 403 ATTGTAGCAGTTGAGTTTGATACATTTCAAAATCA-AGAATTT-GATGACATGGATAATA 460
Query 464 ACCATGTTGGTATCGACATCAACAGCTTGAGATCAGAGAAAGCTTATACAGCAGGTTATT 523
||||||||||||| |||||||| |||||||| ||||||||||||| ||||||||||||||
Sbjct 461 ACCATGTTGGTATTGACATCAATAGCTTGAGCTCAGAGAAAGCTTCTACAGCAGGTTATT 520
Query 524 ACGAAGAC---GATGGTACTTTCAAAAACATGTC-TCTCATAAACCGAAAACCGATACAA 579
|||||||| |||||||||||||||||||| | |||||||| | |||||| ||||||
Sbjct 521 ACGAAGACGATGATGGTACTTTCAAAAACAT-CCGCCTCATAAATCAAAAACCTATACAA 579
Query 580 GCCTGGATTGAATATGATTCCTCAAGAAAACAGCTTAATGTCACAATTCATCCTATTCAT 639
|||||||||||||||||||||||||| | ||| ||||| |||||||| ||||||||||||
Sbjct 580 GCCTGGATTGAATATGATTCCTCAAGGAGACAACTTAACGTCACAATCCATCCTATTCAT 639
Query 640 GTTTCC-AAGCCAAAGACTCCACTGCTTTCTCTAACCAAAGATTTATCACCATATCTCTT 698
| || |||||||||| |||| ||||||||||||||||||||||||| |||||||| ||
Sbjct 640 -CTCCCTAAGCCAAAGATTCCATTGCTTTCTCTAACCAAAGATTTATCTCCATATCT-TT 697
Query 699 T-GAGC-GTATGTACGTTGGGTTCACGTCATCCACAGGCTC-TGTTCTTTCATCCCACTA 755
| || | |||||| ||||| ||||| ||| |||||||| | | ||| |||||| |||||
Sbjct 698 TCGA-CTCTATGTATGTTGGCTTCACTTCAGCCACAGGC-CGTCTTCGTTCATCTCACTA 755
Query 756 TATTCTTGGTTGGACGTTTAAGCTCAATGGGACAGCTTCAAATCTAGATATTTCTCGTCT 815
||||||||||||||| || |||||||||||||||||||||||| ||||||||||||||||
Sbjct 756 TATTCTTGGTTGGACCTTCAAGCTCAATGGGACAGCTTCAAATATAGATATTTCTCGTCT 815
Query 816 TCCAAAACTTCCTGATGACTATAAAAAAGACTCTCCGAGT---AGTCTGAGAAAGATCTT 872
||||||||||||| | | |||||||| |||| ||| ||| |||||||||
Sbjct 816 TCCAAAACTTCCT-A-G----------AGACTCTCGGAGTACAAGTGTGAAAAAGATCTT 863
Query 873 GGCTATCAGTTTGAGTTTAACTGGCCTCACTGTCCTCGTCTTCTTGATCATAAGCGT-CA 931
|||||| |||||||||||||| ||||| | ||||||||||||||| ||||||| | |
Sbjct 864 GGCTATTAGTTTGAGTTTAACCAGCCTCGCCATCCTCGTCTTCTTGACCATAAGC-TATA 922
Query 932 TGCTTTTCTTGAAAAGGAAGAAGTTAATGGAAGTTCTTGAAGACTGGGAGGTGCAGTTTG 991
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 923 TGCTTTTCTTGAAAAGGAAGAAGTTAATGGAAGTTCTTGAAGACTGGGAGGTTCAGTTTG 982
Query 992 GTCCACATAAGTTTTCTTACAAGGATCTCTACATTGCCACAAAGGGTTTCAAGAACAGTG 1051
||||||||| |||| ||||||||||||| |||||||||||||||||||||| |||||| |
Sbjct 983 GTCCACATAGGTTTGCTTACAAGGATCTTTACATTGCCACAAAGGGTTTCAGGAACAGCG 1042
Query 1052 AGCTTCTTGGTAAAGGAGGGTTTGGAAAAGTTTACAAAGGTACATTATTGACGTCTAACA 1111
||||||||||||||||||||||||||||||| || ||||||||||||| |||||||||||
Sbjct 1043 AGCTTCTTGGTAAAGGAGGGTTTGGAAAAGTATATAAAGGTACATTATCGACGTCTAACA 1102
Query 1112 TGGACATCGCGGTGAAGAAAGTTTCTCATGATTCAAGACAAGGAATGAGAGAGTTTGTGG 1171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1103 TGGACATCGCGGTGAAGAAAGTTTCTCATGATTCAAGACAAGGAATGAGAGAGTTTGTGG 1162
Query 1172 CCGAGATCGCGACCATTGGACGTCTCAGACATCATAA-CTTAGTTAGGCTTCTTGGCTAC 1230
| ||||||||||||||||| ||||||||||||| ||| || |||| ||||||||||||||
Sbjct 1163 CAGAGATCGCGACCATTGGGCGTCTCAGACATCCTAATCT-AGTTCGGCTTCTTGGCTAC 1221
Query 1231 TGCAGACGCAAAGGCGAACTCTATTTGGTCTACGATTGTATGCCAAAAGGCAGTCTTGAT 1290
|| || |||||||| |||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 1222 TGTAGGCGCAAAGGAGAACTCTATTTGGTTTACGACTGTATGCCAAAAGGCAGTCTTGAT 1281
Query 1291 AAGTTTCTTTACCATCAACCAGAACAGAGTCTTGATTGGTCACAAAGATTCAACATCATC 1350
|||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1282 AAGTTTCTCTACCACCAACCAGAACAGAGTCTTGATTGGTCACAAAGATTCAAGATCATC 1341
Query 1351 AAAGATGTTGCTTCTGGTCTCTGCTATTTACACCACCAGTGGGTTCAAGTCATCATTCAC 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1342 AAAGATGTTGCTTCTGGTCTCTGCTATTTACACCACCAGTGGGTTCAAGTCATTATTCAC 1401
Query 1411 AGGGACATTAAGCCAGCAAACATTCTCCTTGATGATTCTATGAACGGAAGGCTCGGTGAT 1470
|| |||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||
Sbjct 1402 AGAGACATTAAGCCAGCAAACGTTCTTCTTGATGATTCTATGAACGGAAAGCTCGGTGAT 1461
Query 1471 TTTGGTCTCGCGAAGCTTTGTGATCACGGGTTTGATCCTCAAACCTC 1517
||||||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct 1462 TTTGGTCTCGCAAAGCTCTGTGAACACGGGTTTGATCCTCAAACCTC 1508
Score = 741 bits (401), Expect = 0.0
Identities = 435/452 (96%), Gaps = 0/452 (0%)
Strand=Plus/Plus
Query 1523 GGAAGGCAAGCACAAGCTCTGATGTATTCGCGTTTGGAATACTAATGTTAGAGATTACTT 1582
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1559 GGAAGGCAAGCACAAGTTCTGATGTATTCGCGTTTGGAATACTAATGTTAGAGATTACTT 1618
Query 1583 GTGGGCGAAGACCCGTCTTGCCACGAGCATCTTCGCCGAGCGAGATGGTTCTTACTGATT 1642
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1619 GCGGGCGAAGACCCGTCTTGCCACGAGCATCTTCGCCGAGCGAGATGGTTCTTACGGATT 1678
Query 1643 GGGTGCTAGATTGTTGGGAAGATGACATATTGCAAGTGGTTGATGAGAGGGTTAAGCAGG 1702
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1679 GGGTGCTAGATTGTTGGGAAGATGACATATTGCAAGTGGTTGATGAGAGGGTAAAGCAGG 1738
Query 1703 ATGATAAGTACCTTGAGGAGCAAGTAGCACTGGTTCTGAAACTCGGCTTGTTCTGTTCGC 1762
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1739 ATGATAAGTACCTTGAGGAGCAAGTAGCACTGGTTCTGAAGCTCGGCTTGTTCTGTTCGC 1798
Query 1763 ATCCGGGTGCAGCCATTAGACCAAGCATGTCAAGCGTCATCCAGTTCTTGGATGGTGTGG 1822
|||||| ||||||| | |||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1799 ATCCGGTTGCAGCCGTCAGACCAAGCATGTCGAGCGTCATCCAGTTCTTGGACGGTGTGG 1858
Query 1823 CTCAGCTACCAAACAACTTGCTTGACATTGTGAAAGCTCGAGAGAACGTTGGAGCCATTG 1882
|||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||
Sbjct 1859 CTCAGCTACCAAACAACTTGTTTGACATTGTGAAAGCTAGGGAGAACGTTGGAGCCATTG 1918
Query 1883 AAGGCTTCGGTGAAGCAGCTGAGTCCCTTGCAGAGCCTTGTTCGGTGGCTACGTTGACGT 1942
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1919 AAGGCTTCGGTGAAGCAGCTGAGTCCCTTGCAGAGCCCTGTTCGGTGGCTACATTGACGT 1978
Query 1943 TTACCGAACCATTTGTCTCGCACGGGCGCTAA 1974
|||| ||||||||||||||||| |||||||||
Sbjct 1979 TTACAGAACCATTTGTCTCGCATGGGCGCTAA 2010
> AT1G70130.1 | Symbols: | Concanavalin A-like lectin protein
kinase family protein | chr1:26409743-26411801 REVERSE LENGTH=1971
Length=1971
Score = 549 bits (297), Expect = 4e-155
Identities = 753/964 (78%), Gaps = 67/964 (7%)
Strand=Plus/Plus
Query 583 TGGATTGAATATGATTCCTCAAGAAAACAGCTTAATGTCACAATTCATCCTATTCATG-T 641
|||||||| ||| | ||||| ||||||||| |||| ||||| ||| ||||| | | |
Sbjct 553 TGGATTGAGTATAACAACTCAACTAAACAGCTTGATGTTACAATGCATTCTATT-AAGAT 611
Query 642 TTCCAAGCCAAAGACTCCACTGCTTTCTCTAAC-CAAAGAT-TTATCACCATATCT-CTT 698
|| || || |||| ||| |||||||| | | |||||| || || |||||||| |
Sbjct 612 ATCTAAACCTAAGATTCCTCTGCTTTCGAT-GCGGAAAGATCTT-TCTCCATATCTAC-A 668
Query 699 TGAGCGTATGTACGTTGGGTTCACGTCA-TCCACAGGCTCTGTTCTTTCATCCCACTATA 757
|||| ||||||| |||| || || ||| | | | || | ||| || ||||| |
Sbjct 669 TGAGTATATGTACATTGGCTTTACTTCAGT-GGGAAG-TC-CAAC-TTCTTCTCACTACA 724
Query 758 TTCTTGGTTGGACGTTT-AAGC-TCAATGGGA-CAGCTTCAAATCTAGATATTTCTCGTC 814
||||||| |||| |||| || | ||| ||| ||| ||| || || || | |||||||
Sbjct 725 TTCTTGGCTGGA-GTTTCAA-CAACAA-AGGAGCAGTTTCCGATATAAATCTCTCTCGTC 781
Query 815 TTCCAAAACTTCCTGATGACTAT-AAAAAAGACTC-TCCGAGTAGTCTGAGAAAGATCTT 872
|||| ||| | || ||||| || || || | || | |||| ||| ||||||||
Sbjct 782 TTCCTAAAGTCCCCGATGAAGATCAAGAACG-GTCGT-TGAGT--TCT----AAGATCTT 833
Query 873 GGCTATCAGTTTGAGT-TTAACTGG-CCT-CACT-GTCCTCGTCTTCTTGA-TCATAAGC 927
||| || ||||| ||| || | || | |||| || | || |||||| || | |
Sbjct 834 GGCGATTAGTTTAAGTATT-TCAGGAGTTACACTAGT--T-ATCGTCTTGATTC-TTGGA 888
Query 928 GTCATGCTT-TTCTTGAAAAGGAAGAAGTTAATGGAAGTTCTTGAAGACTGGGAGGTGCA 986
|| ||| || |||||||| ||||||||||| |||||||| |||| ||||||||||||||
Sbjct 889 GTTATG-TTGTTCTTGAAGAGGAAGAAGTTCTTGGAAGTTATTGAGGACTGGGAGGTGCA 947
Query 987 GTTTGGTCCACATAAGTTTTCTTACAAGGATCTCTACATTGCCAC-AAAGGGTTTCAAGA 1045
||||||||| ||||| || ||||||| ||||||| ||| ||||| ||| ||||||||||
Sbjct 948 GTTTGGTCCTCATAAATTCACTTACAAAGATCTCTTCATCGCCACGAAA-GGTTTCAAGA 1006
Query 1046 ACAGTGAGCTTCTTGGTAAAGGAGGGTTTGGAAAAGTTTACAAAGGTA-CATTATTGAC- 1103
|||||||| | ||||| |||||||| ||||||||||||| ||| || | | ||| | |
Sbjct 1007 ACAGTGAGGTACTTGGGAAAGGAGGTTTTGGAAAAGTTTTCAAGGGGATC-TTACCG-CT 1064
Query 1104 GTCTAACATGGA-C-ATCGCGGTGAAGAAAG-TTTCTCATGATTCAAGACAAGGAATGAG 1160
||||| || | | |||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1065 GTCTAGTAT--ACCGATCGCGGTGAAG-AAGATTTCTCATGATTCAAGACAAGGAATGAG 1121
Query 1161 AGAGTTTGTGGCCGAGATCGCGACCATTGG-ACGTCTCAGACATC-ATAACTTAGTTAGG 1218
||||||| | || ||||| || |||||||| | | || ||||||| | | |||||| |
Sbjct 1122 AGAGTTTTTAGCTGAGATTGCTACCATTGGTA-GACTTAGACATCCAGAT-TTAGTTCGT 1179
Query 1219 CTTCTTGGCTACTGCAGACGCAAAGGCGAACTCTATTTGGTCTACGA-TTGTATGCCAAA 1277
|||||||| ||||| ||||| ||||| |||||||| ||||| || || || |||||| ||
Sbjct 1180 CTTCTTGGGTACTGTAGACGTAAAGGAGAACTCTACTTGGTGTATGACTT-TATGCCCAA 1238
Query 1278 AGGCAGTCTTGATAAGTTTCTTTACCATCAACCAGAA-CAGAGTCTTGATTGGTCACAAA 1336
||| || ||||||||||||||||| |||||||| || || | ||||||||||||||| |
Sbjct 1239 AGGAAGCCTTGATAAGTTTCTTTATAATCAACCA-AATCAAATTCTTGATTGGTCACAGA 1297
Query 1337 GATTCAACATCATCAAAGATGTTGCTTCTGGTCTCTGCTATTTACACCACCAGTGGGTTC 1396
||||||| ||||||||||| || || || || |||||||| || || || ||||||||||
Sbjct 1298 GATTCAATATCATCAAAGACGTAGCCTCGGGACTCTGCTACTTGCATCAGCAGTGGGTTC 1357
Query 1397 AAGTCATCATTCACAGGGACATTAAGCCAGCAAACATTCTCCTTGATGATT-CTATGAAC 1455
|||| || ||||||||||| |||||||||||||| ||||| |||||||| | ||||||
Sbjct 1358 AAGTGATTATTCACAGGGATATTAAGCCAGCAAATATTCTTCTTGATGAAAAC-ATGAAC 1416
Query 1456 G-GAAGGCTCGGTGATTTTGGTCTCGCGAAGCTTTGTGATCACGGGTTTGA-TCCTCAAA 1513
| |||| |||||||||||||| || |||||||| ||||| |||||| |||| || |||||
Sbjct 1417 GCGAAG-CTCGGTGATTTTGGACTTGCGAAGCTATGTGACCACGGGATTGACTC-TCAAA 1474
Query 1514 CCTC 1517
||||
Sbjct 1475 CCTC 1478
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 97790661660
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5