BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg354168 Length=369 Score E Sequences producing significant alignments: (Bits) Value AT4G26210.1 | Symbols: | Mitochondrial ATP synthase subunit G ... 555 1e-157 AT4G29480.1 | Symbols: | Mitochondrial ATP synthase subunit G ... 272 2e-72 > AT4G26210.1 | Symbols: | Mitochondrial ATP synthase subunit G protein | chr4:13281937-13283402 FORWARD LENGTH=761 Length=761 Score = 555 bits (300), Expect = 1e-157 Identities = 347/370 (94%), Gaps = 2/370 (1%) Strand=Plus/Plus Query 1 ATGGCATCGAAGTTGCTACAATTGAAATCCAAGGCCTGTGAAGCATCGAAGTTTGTGTCG 60 |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| || Sbjct 109 ATGGCATCAAAGTTGCTACAATTGAAATCCAAGGCATGTGAAGCATCAAAGTTTGTTTCC 168 Query 61 AAGCACGGCACAACTTACTACAAACAGTTGCTGGAGAAGAACAAGCA-GTATATCCAGGA 119 ||||| || |||||||||||||||||||||||||| ||||||||| | |||||||||||| Sbjct 169 AAGCATGGAACAACTTACTACAAACAGTTGCTGGATAAGAACAAG-ATGTATATCCAGGA 227 Query 120 GCCAGCCACTGTAGAGAAATGCAATGAGTTGTCTAAGCAGCTTCTTTACACTCGTCTTGC 179 |||||| ||| |||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 228 GCCAGCTACTATAGAGAAATGCAATGAATTGTCTAAGCAGCTTCTCTACACTCGTCTTGC 287 Query 180 GAGCATTCCTGGGCGTTATGAGTCATTTTGGAAGGAAGTCGATCACGTGAAGGGCTTATG 239 |||||||||||||||| |||||||||||||||||||||| ||||||||||||| ||||| Sbjct 288 TAGCATTCCTGGGCGTTCTGAGTCATTTTGGAAGGAAGTCAATCACGTGAAGGGTTTATG 347 Query 240 GAAGAATCGGGCGGATTTGAAGGTTGAAGATGCTGGAATAGCTGCACTTTTTGGTTTAGA 299 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || Sbjct 348 GAAGAATCGGGCGGATTTGAAGGTTGAAGATGCTGGAATAGCTGCACTTTTTGGTCTGGA 407 Query 300 ATGCTTTGCTTGGTACTGTGCTGGAGAGATCGTAGGAAGGGGCTTCACTTTCACCGGCTA 359 ||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 408 ATGCTTTGCGTGGTACTGTGCAGGAGAGATTGTAGGAAGGGGCTTCACTTTCACCGGCTA 467 Query 360 CTACCCTTGA 369 |||||||||| Sbjct 468 CTACCCTTGA 477 > AT4G29480.1 | Symbols: | Mitochondrial ATP synthase subunit G protein | chr4:14486041-14487777 REVERSE LENGTH=725 Length=725 Score = 272 bits (147), Expect = 2e-72 Identities = 302/376 (80%), Gaps = 14/376 (4%) Strand=Plus/Plus Query 1 ATGGCATCGAAGTTGCTACAA-TTGAAATCCAAGGCCTGTGAAGCATCGAAGTTTGTGTC 59 ||||||||||||||| ||||| || |||| ||||| ||||| || || ||||||||| | Sbjct 133 ATGGCATCGAAGTTGATACAAGTT-CAATCAAAGGCATGTGAGGCTTCAAAGTTTGTGGC 191 Query 60 GAAGCACGGCACAACTTACTACAAACAGTTGCTGGAGAAGAACAAGCAGTATATCCAGGA 119 ||||| || || | ||||||| |||| || |||||||||||||||||||||||||||| Sbjct 192 TAAGCATGGAACTTCCTACTACAGACAGCTGTTGGAGAAGAACAAGCAGTATATCCAGGA 251 Query 120 GCCAGCCACTGTAGAGAAATGC-AATGAGTTGTCTAAGCAGCTT-CTTTACACTCGTCTT 177 || |||||||| ||||| ||| || ||||||||||||||| || || ||||| |||||| Sbjct 252 ACCTGCCACTGTTGAGAAGTGCCAA-GAGTTGTCTAAGCAG-TTGCTCTACACCCGTCTT 309 Query 178 GCGAGCATTCCTGGGCGTTATGAGTCATTTTGGAAGGAAGTCGA-TCACGTGAAGGGCTT 236 || |||||||| || || ||||| | || ||||||||||| || | ||| ||| | | Sbjct 310 GCTAGCATTCCCGGACGCTATGAAACCTTCTGGAAGGAAGTAGACT-ACGCAAAGAACCT 368 Query 237 ATGGAAGAATCGGG-C-GGATTTGAAGGTTGAAGATGCTGGAATAGCTGCACTT-TTTGG 293 ||||||||| | | | || | ||||||| |||||||| ||||| |||||| || ||||| Sbjct 369 ATGGAAGAA-CAGATCCGG-TCTGAAGGTAGAAGATGCAGGAATCGCTGCA-TTGTTTGG 425 Query 294 TTTAGAATGCTTTGCTTGGTACTGTGCTGGAGAGATCGTAGGAAGGGGCTTCACTTTCAC 353 | | ||||||||||| ||||| || || || || |||| || || || ||||| ||||| Sbjct 426 TCTCGAATGCTTTGCATGGTATTGCGCAGGTGAAATCGCCGGCAGAGGATTCACCTTCAC 485 Query 354 CGGCTACTACCCTTGA 369 ||||| ||||| ||| Sbjct 486 AGGCTATTACCCATGA 501 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 17342373405 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5