BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg354185
Length=939
Score E
Sequences producing significant alignments: (Bits) Value
AT4G26010.1 | Symbols: | Peroxidase superfamily protein | chr4... 1282 0.0
AT1G34510.1 | Symbols: | Peroxidase superfamily protein | chr1... 538 4e-152
AT1G34330.1 | Symbols: | pseudogene, putative peroxidase, simi... 407 1e-112
> AT4G26010.1 | Symbols: | Peroxidase superfamily protein | chr4:13200593-13201941
FORWARD LENGTH=1246
Length=1246
Score = 1282 bits (694), Expect = 0.0
Identities = 868/950 (91%), Gaps = 19/950 (2%)
Strand=Plus/Plus
Query 1 ATGAGGGCAATCACAGCTTTGTTTTTCCTTTTCTGTTTCGTTGCTCCCTCTGCTTTGGCG 60
|||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 61 ATGAGGTCAATCACAGCTTTGTTTTTCCTTTTCTGTTTCCTTGCTCCTTCTGCTTTGGCG 120
Query 61 CAGCTCCG-ACAAGGGTTCTACGGCCGCTCATGCCCTCGAGCTGAATCTATCGTTGCTAA 119
|||||||| || ||||||||| ||||||||||||| || || ||||||||||| ||||
Sbjct 121 CAGCTCCGAAC-TGGGTTCTACAGCCGCTCATGCCCCCGTGCCGAATCTATCGTGGCTAG 179
Query 120 TGTTGTTGCCAGCCGTTTCCGCCGTGAC-CGTTCCATCACTGCTGCATTTCTTCGTATGC 178
||||||||||| ||||||| | ||||| | ||||| ||||| ||||||||||||||||
Sbjct 180 TGTTGTTGCCAACCGTTTCAGAAGTGACAAG-TCCATTACTGCAGCATTTCTTCGTATGC 238
Query 179 AGTTTCATGATTGCTTTGTCAGGGGTTGTGATGCTTCCCTCTTGATCGACCCAAGACCTG 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 AGTTTCATGATTGCTTTGTCAGGGGTTGTGATGCTTCCCTCTTGATCGACCCAAGACCTG 298
Query 239 GAAGGCCATCAGAGAAAAGCACTGGACCAAACGCAAGCGTGAGAGGCTACGAGGTCATTG 298
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 299 GAAGGCCATCAGAGAAAAGCACTGGACCAAATGCAAGCGTGAGAGGCTACGAGATCATTG 358
Query 299 ATGAGGCTAAGAGACAACTAGAGGCTGCATGTCCCCGAACTGTCTCATGCGCAGACATTG 358
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 359 ATGAGGCTAAGAGACAGCTCGAGGCTGCATGTCCCCGAACTGTCTCATGCGCAGACATTG 418
Query 359 TAACTCTAGCCACAAGAGACTCGGTCGCATTAGCCGGCGGTCCAAGATACTCAGTACCAA 418
||||||| |||||||||||||||||||||||||| || |||||||| | |||||||||||
Sbjct 419 TAACTCTTGCCACAAGAGACTCGGTCGCATTAGCTGGTGGTCCAAGGTTCTCAGTACCAA 478
Query 419 CAGGAAGACGTGATGGATTAAGGTCAAACCCTGGTGATGTGAACTTACCCGGACCAACAA 478
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 479 CAGGAAGACGTGATGGATTAAGGTCAAACCCCAATGATGTGAACTTACCCGGACCAACAA 538
Query 479 TTCCGGTTAGCGCATCTATCCAATTGTTTGCAGCTCAAGGTATGAATACCAACGATATGG 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 539 TTCCGGTTAGCGCATCTATCCAATTGTTTGCAGCTCAAGGTATGAATACCAACGATATGG 598
Query 539 TTACACTTATTGGTGGTGGACACAGCGTTGGTGTTGCACATTGCAGTCTCTTC-AGGGAC 597
||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||
Sbjct 599 TTACACTTATTGGTGGTGGCCACAGCGTCGGTGTTGCACATTGCAGTCTCTTCCAGG-AC 657
Query 598 AGGCTTGCCGACCCAGCAATGGA-CAGGTCATTGAA-TGCTAGGTTGAGGAACACATGTC 655
|||||| |||||| |||||||| | |||||||| | |||| ||||||| | ||| |
Sbjct 658 AGGCTTTCCGACCGTGCAATGGAACCC-TCATTGAAGT-CTAGCTTGAGGAGGAAATG-C 714
Query 656 -GTGCCCCAAATGACCCATCAGTC-TTTTTGGACCAAAGGACTCCATTTACTGTGGATAA 713
|| |||| || |||||| || | ||||||||||||| |||| ||||||||||||||||
Sbjct 715 AGTTCCCCTAACGACCCAACAA-CGTTTTTGGACCAAAAGACTTCATTTACTGTGGATAA 773
Query 714 CGCTATTTATGGAGAGATCCGAAGCCAAAGAGGAATTCTAAGAATTGATCAAAACTTGGG 773
||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 774 CGCAATCTATGGAGAGATCCGAAGACAAAGAGGAATTCTAAGAATTGATCAAAACTTGGG 833
Query 774 TCTCGCTGGATCAACCCGTGGAATTGTGTCAAGTTTTGCATCGAGCAATACACTCTTCAG 833
||| | | |||||||| |||| |||||||| ||| |||||| |||||||||||||||||
Sbjct 834 TCTTGATAGATCAACCAGTGGGATTGTGTCTGGTTATGCATCAAGCAATACACTCTTCAG 893
Query 834 ACAGAGATTTGCCCAAGCCAT-GGTGAAAATGGGTACCATTAAGGTTCTTACTGGACGCT 892
| ||||||||||| |||| || |||||||||||||||||||||||||||||| ||||| |
Sbjct 894 AAAGAGATTTGCCGAAGC-ATTGGTGAAAATGGGTACCATTAAGGTTCTTACCGGACGTT 952
Query 893 CTGGAGAGATCAGGAGAAACTGCAGAGTCTTCAACAAC-G-G-ACGTTGA 939
|||||||||||||||||||||||||||||||||||||| | | |||||||
Sbjct 953 CTGGAGAGATCAGGAGAAACTGCAGAGTCTTCAACAACTGAGGACGTTGA 1002
> AT1G34510.1 | Symbols: | Peroxidase superfamily protein | chr1:12615733-12617032
REVERSE LENGTH=1208
Length=1208
Score = 538 bits (291), Expect = 4e-152
Identities = 743/956 (78%), Gaps = 52/956 (5%)
Strand=Plus/Plus
Query 1 ATGAGGGCAATCACAGCTTTGTTTTTCCTTTTCTGTTTCGTTGCTCCCTCTGCTTTGGCG 60
|||||||||||| |||||| ||||||| ||||||||| | ||| |||||||| ||| |||
Sbjct 81 ATGAGGGCAATCGCAGCTTGGTTTTTCATTTTCTGTTACCTTGTTCCCTCTGTTTTTGCG 140
Query 61 CAGCTCCGACAAGGGTTCTACGGCCGCT-CATGCCCTCGAGCTGAATCTATCGTTGCTA- 118
|||||||| || ||||| ||| | | | ||||||||| |||||||||||||| | ||
Sbjct 141 CAGCTCCGGCATGGGTTTTAC-GAGGGTACATGCCCTCCCGCTGAATCTATCGTGGGTAG 199
Query 119 ATGTTGTTGCCAGCCGTTTCCG-CCGTGACCGTTCCATCACTGCTGCATTTCTTCGTATG 177
| |||||| || || || | |||| |||| | | ||||| ||||| |||||||||
Sbjct 200 A-GTTGTTTTCAACC-ATTGGGACCGTAACCGAACGGTTACTGCAGCATTGCTTCGTATG 257
Query 178 CAGTTTCATGATTGCT-TTGTCAGGGGTTGTGATGCTTCCCTCTTGATCGACCCAAGA-C 235
|||||||||||||| | |||||| ||||||||||||||||||||||||||||||| | |
Sbjct 258 CAGTTTCATGATTG-TGTTGTCAAAGGTTGTGATGCTTCCCTCTTGATCGACCCAACAAC 316
Query 236 CTGGAAGGCCATCAGAGAAAAGCA-CTGGACCAAACGCAAGCGTGAGAGGCTACGAGGTC 294
| | ||| ||||||||||||||| | || | ||| ||| | |||||||| | |||| ||
Sbjct 317 C-GAAAGACCATCAGAGAAAAGCGTCGGG-CGAAATGCAGGGGTGAGAGGTTTCGAGATC 374
Query 295 ATTGATGAGGCTAAGAGACAACTAGAGGCT-GCATGTCCCCGAA--CTGTCTCATGCGCA 351
|| ||||| ||||||| | |||| ||| || | || ||| ||| | ||||| ||||||
Sbjct 375 ATAGATGAAGCTAAGAAAGAACTCGAG-CTTGTTTG-CCC-GAAAACAGTCTCTTGCGCA 431
Query 352 GACATTGTAACTCTAGCCACAAGAGACTCGGTCGCATTAGCCGGCGGTCCAA-GATACTC 410
|||||||||||| ||||||| ||||||||| | |||||||| || ||||||| | | |
Sbjct 432 GACATTGTAACTATAGCCACCAGAGACTCGATTGCATTAGCGGGTGGTCCAAAGTT-CAA 490
Query 411 AGTACCAACAGGAAGACGTGATGGATTAAGGTCAAACCCTGGTGATGTGAACTTACCCGG 470
||||| |||||||||||| ||||||||||| ||||||||| ||||||| || || | ||
Sbjct 491 AGTACGAACAGGAAGACGCGATGGATTAAGATCAAACCCTAGTGATGTTAAATTGCTAGG 550
Query 471 ACCAACAATT-CCGGTTAGCG-CATCTATCCAATTGTTTGCAGCTCA-AGGTATGAATAC 527
||||||| || ||| | || |||| ||| || ||| | || | |||| | |||
Sbjct 551 ACCAACAGTTTCCG-TG-GCTACATCAATCAAAGCATTTAAATCT-ATAGGTTTTAATGT 607
Query 528 CAA-CGAT-ATGGTTACACTTATTGGTGGTGGACACAGC-GTTGGTGTTGCACATTGCAG 584
|| | | |||||| |||||||||||||||| |||| | || |||||||||||||| ||
Sbjct 608 -AAGC-ACCATGGTTGCACTTATTGGTGGTGGCCACA-CTGTCGGTGTTGCACATTGTAG 664
Query 585 TCTCTT-CAGGGACAGGCTTGCCGACCC-AGCAATGGACAGGTCATTGA-ATGCTAGGTT 641
||| || |||| | ||| || || || | ||||||||| | ||| | |||| |||
Sbjct 665 TCTTTTTCAGG-ATAGGATTAAGGATCCTAA-AATGGACAGCAAACTGAGA-GCTAAGTT 721
Query 642 GAGGAACACATGTCGTGCCCCAAATGACCCATCAGTCTTTTTGGACCAAAGGACTCCATT 701
| ||| ||||||||| ||| || ||||||||||| || ||||||||| || |||||
Sbjct 722 AAAGAAGTCATGTCGTGGCCCGAACGACCCATCAGTGTTCATGGACCAAAATACGCCATT 781
Query 702 TACTGTGGATAACGCTATTTATGGAGAGATCCGA-AGCCAAAGAGGAATTCTAAGAATTG 760
|| || || || | || ||| || |||| | ||| || ||| ||| || |||||||
Sbjct 782 TAGAGTAGACAATGAAATCTATAGACAGATGATACAGC-AACGAGCAATCCTTAGAATTG 840
Query 761 ATCAAAACTTGGGTCTCGCTGGATCAACCCG-TGGAATTGTGTCA-AGTTTTGCAT-CGA 817
|| | |||||| || || |||||||||| | | || |||||||| | |||||||| | |
Sbjct 841 ATGACAACTTGATTCGCGATGGATCAACCAGGTCGA-TTGTGTCAGA-TTTTGCATACAA 898
Query 818 GCAATACACTCTTCAGACAGAGATTTGCCCAAGCCATGGTGAAAATGGGT-ACCATTAAG 876
||||| | | |||| | |||| |||||| |||| ||| |||||||||| | || | |
Sbjct 899 -CAATAAATTATTCAAAGAGAGTTTTGCCGAAGCGATGCAGAAAATGGGTGAA-AT-AGG 955
Query 877 -GTTCTTACTGGACGCT-CTGGAGAGATCAGGAGAAACTGCAGAGTCTTCAACAAC 930
|||||||| ||| | | ||||||||||||||| ||||||||||| ||||||||||
Sbjct 956 AGTTCTTACGGGA-GATTCTGGAGAGATCAGGACAAACTGCAGAGCCTTCAACAAC 1010
> AT1G34330.1 | Symbols: | pseudogene, putative peroxidase, similar
to anionic peroxidase GI:559235 from (Petroselinum crispum);
blastp match of 35% identity and 2.3e-53 P-value to GP|21426121|gb|AAM52318.1|AC105363_7|AC105363
Putative peroxidase
{Oryza sativa (japonica cultivar-group)} | chr1:12528095-12529132
FORWARD LENGTH=1038
Length=1038
Score = 407 bits (220), Expect = 1e-112
Identities = 581/750 (77%), Gaps = 46/750 (6%)
Strand=Plus/Plus
Query 201 GGGTTGTGATGCTTCCCTCTTGATCGACCCAA-GACCTGGAAGGCCATCAGAGAAAAGCA 259
|||||||||||||||||||||||||||| ||| | || | ||||||||| |||||||||
Sbjct 304 GGGTTGTGATGCTTCCCTCTTGATCGACTCAACG-CCCGAAAGGCCATCTGAGAAAAGCG 362
Query 260 CTGGA-CCAAACGCAAGCGTGAGAGGCTACGAGGTCATTGATGAGGCTAAGAGACAACTA 318
| ||| |||||| |||||||||||||| |||| |||| ||||||| ||||| | | ||
Sbjct 363 C-GGAGGCAAACGTAAGCGTGAGAGGCTTCGAGATCATCGATGAGGTTAAGAAAGAGCTT 421
Query 319 GAGGCT-GCATGTCCC-CGAACTGTCTCATGCGCAGACATTGTAACTCTAGCCACAAGAG 376
|| | | | || ||| ||| |||||||||||||||||||||||||||||||||| ||
Sbjct 422 GA-GATAGTTTG-CCCAAAAACAGTCTCATGCGCAGACATTGTAACTCTAGCCACAAAAG 479
Query 377 ACTCGGTCGCATTAGCCGGCGGTCCAAGATACTCAGTACCAACAGGA-AGACGTGAT--- 432
||||| | |||||||| || |||||| | | | |||||| ||||||| || || ||
Sbjct 480 ACTCGATTGCATTAGCGGGTGGTCCACGTTTCACAGTACAAACAGGATAG--GTAATTTC 537
Query 433 -G-GATTAAGGTCAAACCCT-GGTGATGTGAACTTACCCGGACCAAC-AATT-CCGGTTA 487
| |||| | |||| ||| || | ||||| || ||||||||| | |||| ||| |
Sbjct 538 CGTGATTTATATCAAGTCCTAGG-GCTGTGATTTTGCCCGGACCA-CTAATTTCCG-TG- 593
Query 488 GC-GCATCTATCCAAT-TGTTTGCAGCTCAAGGTATGAATACCAACGATATGGTTACACT 545
|| | ||| ||| || | |||| || | ||||| ||||| || | | |||||| ||||
Sbjct 594 GCTGTATCAATCAAAGAT-TTTGAAGGTAAAGGTTTGAATGTCACCAACATGGTTGCACT 652
Query 546 TATTGGTGGTGGACACAGCGTTGGTGTTGCACATTGCAGTCTCTT-CAGGGACAGGCTTG 604
|||||||||||| |||||||| |||||||||||||||||||| || |||| | ||||||
Sbjct 653 TATTGGTGGTGGTCACAGCGTCGGTGTTGCACATTGCAGTCTTTTTCAGG-ATAGGCTTA 711
Query 605 CCGACCC-AGCAATGGACAGGTCATTGAATGCTAGGTTG-AGGAACACATGTCGTGCCCC 662
|| || | ||||||||| | |||| |||| ||| || ||||||||||||| ||
Sbjct 712 AGGATCCTAA-AATGGACAGCAAACTGAAAGCTAAGTTACAG-AACACATGTCGTGGTCC 769
Query 663 AAATGACCCATCAGTCTTTTTGGACCAAAGGACTCCATTT-ACTGTGGATAACGCTATT- 720
||||||||||||||| | |||||||||| ||| ||| || | || || || | | |
Sbjct 770 AAATGACCCATCAGTGGTCTTGGACCAAATGACGCCACTTGAG-GTAGACAAT-CAAATC 827
Query 721 TATGGAGAGATCCGAAGCCAAAGAGGAATTCTAAGAATTGATCAAAACTTGGGTCTCGCT 780
||| | |||| ||| ||||||||||| || ||||||||||||||||||||||||| |
Sbjct 828 TATAAACAGATAAAAAGTCAAAGAGGAATCCTTAGAATTGATCAAAACTTGGGTCTCGAT 887
Query 781 GGA-TCAACCCGT-GGAATTGTGTCAAGTTTTGCATCGA--GCAATACACTCTTCAGACA 836
| | |||||| || ||| | || |||| |||||||| | | || ||| | ||| || |
Sbjct 888 G-ACTCAACCAGTAGGA-TCGTATCAAATTTTGCATTAAATG-AA-ACATTATTCGGAGA 943
Query 837 GAGATTTGCCCAAGCCATGGTGAAAATGGGT-ACCATTAAGGTTCTTACTGGACGCTCTG 895
|||||||| |||| ||| || ||||||| | || || |||||||| ||| ||||
Sbjct 944 AAGATTTGCTGAAGCAATGCAGATAATGGGTGAA-ATAAAAGTTCTTACGGGAAATTCTG 1002
Query 896 GAGAGATCAGGAGAAACTGCAGAGTCTTCA 925
|||||||||||| |||||||| |||| |||
Sbjct 1003 GAGAGATCAGGACAAACTGCATAGTCGTCA 1032
Score = 147 bits (79), Expect = 3e-34
Identities = 163/203 (80%), Gaps = 8/203 (4%)
Strand=Plus/Plus
Query 1 ATGAGGGCAATCACAGCTTTGTTTTTCCTTTTCTGTTTCGTTGCTCCCTCTGCTTT-GGC 59
||||||||||||||||||| ||||||| ||||||| ||| ||| |||||||| ||| ||
Sbjct 1 ATGAGGGCAATCACAGCTTCGTTTTTCATTTTCTGCTTCCTTGTTCCCTCTGTTTTCGG- 59
Query 60 GCAGCTCCGACAAGGGTTCTACGGCCGCTCATGCCCTCGAGCTGAATCTATCGTTG-CTA 118
| ||||||||| ||||| || | | | |||||||||| |||||||||| || || |||
Sbjct 60 GAAGCTCCGACGTGGGTTTTATGACAGTTCATGCCCTCTCGCTGAATCTACCG-TGTCTA 118
Query 119 -ATGTTGTTGCCAGCCGTTTC-CGCCGTGACCGTTCCATCACTGCTGCATTTCTTCGTAT 176
| |||||||||| | | | | || | ||| || | ||||| || || ||||||||
Sbjct 119 GA-GTTGTTGCCAAACATCACTC-CCTTAACCAAACCGTTACTGCAGCGTTGCTTCGTAT 176
Query 177 GCAGTTTCATGATTGCTTTGTCA 199
|||||||||||||||||||||||
Sbjct 177 GCAGTTTCATGATTGCTTTGTCA 199
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 45914010358
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5