BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg354233
Length=1992
Score E
Sequences producing significant alignments: (Bits) Value
AT4G25515.1 | Symbols: SLK3 | SEUSS-like 3 | chr4:13028219-1303... 2660 0.0
AT4G25520.1 | Symbols: SLK1 | SEUSS-like 1 | chr4:13032178-1303... 1799 0.0
> AT4G25515.1 | Symbols: SLK3 | SEUSS-like 3 | chr4:13028219-13031799
FORWARD LENGTH=2394
Length=2394
Score = 2660 bits (1440), Expect = 0.0
Identities = 1870/2065 (91%), Gaps = 80/2065 (4%)
Strand=Plus/Plus
Query 1 ATGCAGAGGAGCAGTGCCATCAATAATAATATGCGTATCCCAACATCACCTGTGTCTTTC 60
|||||||||||||||| |||| |||||| ||| |||||| || || || ||||||||
Sbjct 1 ATGCAGAGGAGCAGTGGCATC---AATAATCTGCATATCCCGACTTCGCCAATGTCTTTC 57
Query 61 TCCCCGAGTAGCATTAACATACCTGGTTCATTGGTTCTTGATGGCTCTGCTTCAATGCAA 120
|| ||| | |||||||| | ||||| ||| ||||||||||||| ||| |||||||||||
Sbjct 58 TCTTCGAATGGCATTAACCTGCCTGGATCAATGGTTCTTGATGGATCTCCTTCAATGCAA 117
Query 121 CACTTACCT---cagcagca---g------c-ag--cagc-agc----C-----T--GTT 153
||||||||| |||||||| | | || |||| ||| | | |||
Sbjct 118 CACTTACCTCAGCAGCAGCAGCGGCAACTACTAGAACAGCAAGCAGGACAAGGTTCAGTT 177
Query 154 CCAATGAGGGAAAACAATTATTCCCATGTGGATAAGAAACCCAGATTAGAAGTGAAGCAC 213
|||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||
Sbjct 178 CCAATGAGGGAAAACAGTTATTCCCATGTAGATAAGAAACTGAGATTAGAAGTGAAGCAA 237
Query 214 GAAGACTTGTTGCAGCAGCAGATTTTACAGCAGTTGATCCACCGTCAGGACCCCACGGGA 273
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 238 GAAGACTTGTTGCAGCAGCAGATTTTACAGCAGTTGATCCAGCGCCAGGACCCCACGGGA 297
Query 274 AGGAATCCGCAGTTGCAAGCTTTGCTTCAGCAGCAGAGACTCAGGCAACACCAGCAGATG 333
|| ||||||||| |||||||||||||||||||||||||| | |||||||| |||||||||
Sbjct 298 AGAAATCCGCAGATGCAAGCTTTGCTTCAGCAGCAGAGAGTGAGGCAACATCAGCAGATG 357
Query 334 CTTCAATCCATGTCACCCTCCCAGAGGCTCCAACTTCAGCACCAGCAGCAGTTGAGACAG 393
|||||||||||||||||||| ||||| |||||||||||| | ||||||||| ||||||||
Sbjct 358 CTTCAATCCATGTCACCCTCTCAGAGACTCCAACTTCAGAAACAGCAGCAGCTGAGACAG 417
Query 394 CAATTACAG---C----AA--CAACAGATTTCTCCTAA--T--G------T--AGTTGGC 432
|| |||||| | || ||||||||||||||||| | | | |||||||
Sbjct 418 CAGTTACAGCAACAAGGAACCCAACAGATTTCTCCTAATGTACGTCCTTATGAAGTTGGC 477
Query 433 GTCTGTGCTCGCAAATTGATGATGTACTTGTATCATCTGCAGCAACGGCCTGCTGAAAAT 492
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 GTCTGTGCTCGGAAATTGATGATGTACTTGTATCATCTGCAGCAACGGCCTGCTGAAAAT 537
Query 493 TGCATTACCTATTGGAGGAAATTTGTGGCAGAATACTTCTCACCTCGTGCAAAGCAAAGG 552
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 538 TGCATTACTTATTGGAGGAAATTTGTGGCAGAATACTTCTCACCTCGTGCAAAGCAGAGG 597
Query 553 TTGTGCTTGTCACAGTACGAAAGTGCTGGGCACCATGCGCTTGGCATGTTTCGACAGGCA 612
||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||
Sbjct 598 TTGTGCTTGTCACAGTACGAAAGTGTTGGGCACCATGCCCTTGGCATGTTTCCACAGGCA 657
Query 613 GCTCCGGATATGTGGCAGTGTGATCTTTGCGGCACCAAGTCTGGAAAAGGATTTGAAGCA 672
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||
Sbjct 658 GCTCCGGATATGTGGCAGTGTGATCTTTGCGGCACTAAGTCTGGAAAGGGATTTGAGGCT 717
Query 673 ACTTTCGATGTGCTTGCCAGACTTATTGAAATCAAATTTGCAAGTGGCATCATTGATGAG 732
||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 718 ACTTTTGATGTGCTAGCCAGACTTATTGAAATAAAATTTGCAAGTGGCATCATTGATGAG 777
Query 733 CTCTTATATCTGGACCACCCACGAGAAAACAGATTTCCCAATGGACTGATGATGTTAGAA 792
||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 778 CTCTTATATCTTGACCACCCACGAGAAAACAGATTTCCCAATGGACTGATGATGCTAGAA 837
Query 793 TATAGAAAAGCAGTTCAGGAAACTGTACACGAGCAGTTTCGTGTTGTCCGTGAGGGCCAT 852
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 838 TATAGAAAAGCAGTTCAGGAAACTGTACACGAGCAGTTTCGTGTTGTTCGTGAGGGCCAT 897
Query 853 CTTCGCATCATATTCTCTCAAGATCTGAAGATACTGTCTTGGGAGTTTTGTGCTCGGCGT 912
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 898 CTTCGTATCATATTCTCTCCAGATCTGAAGATACTGTCTTGGGAGTTTTGTGCTCGGCGT 957
Query 913 CATGAAGAGCTTCTTCTTCGCAGACTTATTGCTCCTCAGGTGAACCAGTTGCTTCAGGTT 972
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 958 CATGAAGAGCTTCTTCTTCGCAGGCTTATTGCTCCGCAGGTGAACCAGTTGCTTCAGGTT 1017
Query 973 GCACAGAAATGCCAGAGCACAATTTCAGAGAGTGGTTCAGAGGGAGTTTCTCAGCAGGAT 1032
|| ||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||
Sbjct 1018 GCTCAGAAATGCCAGAGCACGATTTCTGAGAGTGGTTCACAGGGAGTTTCTCAGCAGGAT 1077
Query 1033 TTGCAGTCAAACAGTAATATGGTCTTGGGAGCAGG-ACGACAGCTGGCGAAGTTCATGGA 1091
| |||||||||||||| ||||||||||||||||| | | |||||||| |||||||||||
Sbjct 1078 ATACAGTCAAACAGTAACATGGTCTTGGGAGCAGGGAGG-CAGCTGGCAAAGTTCATGGA 1136
Query 1092 ATTACAGTCACTGAATGATCTTGGCTATCCAAAAAGATATATCAGAACTCTACAGATATC 1151
||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 ATTACAGTCGCTCAATGATCTTGGCTATCCAAAAAGATATATCAGAACTCTACAGATATC 1196
Query 1152 TGAAGTTGTCAAGAGCATGAAGGATCTGATGAATTTCACTGGCGAGCACAAAATCGGCCC 1211
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1197 TGAAGTAGTCAAGAGCATGAAGGATCTGATGAATTTCACTGGCGAGCACAAAGTCGGCCC 1256
Query 1212 TATCGAGGGTTTAAAACAGCTTCTGGAACAGACAGCGACAGTGAAGCTCCAGAGACAGAA 1271
| ||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1257 TCTCGAGGGGTTAAAACAGCTTCTGGAACAGACGGCGACAGTGAAGCTTCAGAGACAGAA 1316
Query 1272 AATGCAAGAGATGGAGCAGTTTGGG----------C----------C-AGCTCAAGCTCA 1310
||||||||||||||||||||||||| | | ||||||||||||
Sbjct 1317 AATGCAAGAGATGGAGCAGTTTGGGAATAGTGGAGCAATGAGTGGGCCAGCTCAAGCTCA 1376
Query 1311 AATGGCGTTATCTTCAGGTACGATGAGCGGTTCAACTGCCAACAACAACTCCAATAATCA 1370
|||| | ||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 AATGACTTTATCTTCAGGAACGATGAGCGGTTCAACTGCCAACAACAACTCCAATAATCA 1436
Query 1371 CCATCAAATTGTTGGTCGTGGAGCTATGAATGGCTCAGCTCAAGCCGCAGCAGCTTTGAC 1430
||||||||||||||||||||||||||||||||| ||| |||||||| |||||||| ||||
Sbjct 1437 CCATCAAATTGTTGGTCGTGGAGCTATGAATGGGTCACCTCAAGCCACAGCAGCTCTGAC 1496
Query 1431 CAACTACCAAAGCATGCTTATGAGGCAAAATGCTATGAATAACCCAAACTCAAATACGGG 1490
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct 1497 CAACTACCAAAGCATGCTTATAAGGCAAAATGCTATGAATAACCAAAACTCAAATACGGG 1556
Query 1491 TAAACAAGAGGGGTTCTCGAGTCAGAATCCAACCCCGAACTCAAACCAGAGTCCATCTTC 1550
|| ||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||
Sbjct 1557 CAACCAAGAGGGGTTCTCGAGTCAGAACCCAACGCTGAACTCAAACCAGAGTCCATCTTC 1616
Query 1551 TTCGTCAG-ATCAGAGGCAGAACTTAGCTACAGGTGGATTTCCCAGTTCTCCTCAAATGC 1609
||| || | | |||||| |||||||||||||| ||||||||||||| |||||||||||||
Sbjct 1617 TTCATC-GCAGCAGAGGGAGAACTTAGCTACAAGTGGATTTCCCAGCTCTCCTCAAATGC 1675
Query 1610 AACAGCAGCGGCGCA-CCATGGATGGCGCTCCCAGCATGCTTCCGCAGAATCATCCTCGT 1668
||||||||| || || || || ||||| |||||| ||||||||||||||||||||||| |
Sbjct 1676 AACAGCAGCAGCACATCC-TGAATGGCACTCCCAACATGCTTCCGCAGAATCATCCTCAT 1734
Query 1669 CAGTTGCAATCAGC-ACAGTCACATGGTAACACTCGGGAGCAGCAGATGCTTCATCAGCT 1727
||||||||||| || ||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1735 CAGTTGCAATC-GCCACATTCACATGGTAACACTCAGGAGCAGCAGATGCTTCATCAGCT 1793
Query 1728 GTTGCAGGAGATGTCTGAAAATGGAGCGAGTGTGCAACAGCAACAAGCCTTTTTGGGTCA 1787
||||||||||||| |||||||||||||||||||| |||||||||| |||||| ||||||
Sbjct 1794 GTTGCAGGAGATGACTGAAAATGGAGCGAGTGTGGAACAGCAACAGGCCTTTCCGGGTCA 1853
Query 1788 AAGTGGTAGCAACAGTAACGCAGAGAGAAACACAACTGCCTCTACTTCCAACATCTCAGG 1847
|||||||||||| | |||| | ||||||||||||||||||||||||||||| ||||||||
Sbjct 1854 AAGTGGTAGCAATAATAACACCGAGAGAAACACAACTGCCTCTACTTCCAATATCTCAGG 1913
Query 1848 AGGAGGCCGAGTTCCAAGCCGCAACAATAGTTTTAAAGCAGCCTCAAACAACAACCTTCC 1907
||||||||||||||||||||||| |||||||||||||||| | |||||||||||||||||
Sbjct 1914 AGGAGGCCGAGTTCCAAGCCGCATCAATAGTTTTAAAGCATCTTCAAACAACAACCTTCC 1973
Query 1908 TTTTTCAGAAGATATATCGGTTTCGGACCATGATTTCTCAGAAGATGGCTTCTTCAACAT 1967
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1974 TTTTTCAGAAGATATATCGGTTACGGACCATGATTTCTCAGAAGATGGCTTCTTCAACAA 2033
Query 1968 CAGTGATATCTATGGTGGCTTGTAA 1992
|||||||||||||||||||||||||
Sbjct 2034 CAGTGATATCTATGGTGGCTTGTAA 2058
> AT4G25520.1 | Symbols: SLK1 | SEUSS-like 1 | chr4:13032178-13036213
REVERSE LENGTH=2722
Length=2722
Score = 1799 bits (974), Expect = 0.0
Identities = 1332/1490 (89%), Gaps = 83/1490 (6%)
Strand=Plus/Plus
Query 1 ATGCAGAGGAGCAGTGCCATCAATAATAATATGCGTATCCCAACATCACCTG-TGTCTTT 59
|||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||
Sbjct 282 ATGCAGAGGAGCAGTGGCATCAATAATAATATGCGTATCCCAACATCACC-GATGTCTTT 340
Query 60 CTCCCCGAGTAGCATTAACATACCTGGTTCATTGGTTCTTGATGG--CT-CTGCTTCAAT 116
|||| ||| |||| |||||||||| |||||||||||||||||||| || ||||||||||
Sbjct 341 CTCCTCGAATAGCGTTAACATACCGGGTTCATTGGTTCTTGATGGCTCTGCTGCTTCAAT 400
Query 117 GCAACACTTACCT---cagcagcagcag------------cag----ca-g-c------C 149
||||||||||||| |||||||||||| ||| || | | |
Sbjct 401 GCAACACTTACCTCAGCAGCAGCAGCAGCAACTACTACAACAGCAAACAGGACAAGGTTC 460
Query 150 TGTTCCAATGAGGGAAAACAATTATTCCCATGTGGATAAGAAACCCAGATTAGAAGTGAA 209
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 461 TGTTCCAATGAGGGAGAACAATTATTCCCATGTGGATAAGAAACCCAGATTAGAAGTGAA 520
Query 210 GCACGAAGACT-TGTTGCAGCAGCAGATTTTACAGCAGTTGATCCACCGTCAGGACCCCA 268
||| ||||| | |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 521 GCAAGAAGA-TATGTTGCAGCAGCAGATTTTACAGCAGTTGATCCAGCGTCAGGACCCCA 579
Query 269 CGGGAAGGAATCCGCAGTTGCAAGCTTTGCTTCAGCAGCAGAGACTCAGGCAACACCAGC 328
|||| |||||||||||| |||||||||||||||||||||||||||| |||||||| ||||
Sbjct 580 CGGGGAGGAATCCGCAGATGCAAGCTTTGCTTCAGCAGCAGAGACTGAGGCAACATCAGC 639
Query 329 AGATGCTTCAATCCATGTCACCCTCCCAGAGGCTCCAACTTCAGCACCAGCAGCAGTTGA 388
||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||| |||
Sbjct 640 AGATGCTTCAATCCATGTCACCCTCTCAGAGACTCCAACTTCAGCAACAGCAGCAGCTGA 699
Query 389 GACAGCAATTACAG---C----AA--CAACAGATTTCTCCTAA--T--G------T--AG 427
||||||| |||||| | || ||||||||| ||||||| | | | ||
Sbjct 700 GACAGCAGTTACAGCAACAAGGAACCCAACAGATTCCTCCTAATGTACGTCCTTATGAAG 759
Query 428 TTGGCGTCTGTGCTCGCAAATTGATGATGTACTTGTATCATCTGCAGCAACGGCCTGCTG 487
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 760 TTGGCGTCTGTGCTCGGAAATTGATGATGTACTTGTATCATCTGCAGCAACGGCCTGCTG 819
Query 488 AAAATTGCATTACCTATTGGAGGAAATTTGTGGCAGAATACTTCTCACCTCGTGCAAAGC 547
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 820 AAAATTGCATTACCTATTGGAGGAAATTTGTGGCAGAATACTTTTCACCTCGTGCAAAGC 879
Query 548 AAAGGTTGTGCTTGTCACAGTACGAAAGTGCTGGGCACCATGCGCTTGGCATGTTTCGAC 607
| || |||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 880 AGAGATTGTGCTTGTCACAGTACGAAAGTGCTGGGCACCATGCGCTTGGCATGTTCCCAC 939
Query 608 AGGCAGCTCCGGATATGTGGCAGTGTGATCTTTGCGGCACCAAGTCTGGAAAAGGATTTG 667
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 940 AGGCAGCTCCGGATATGTGGCAGTGTGATCTTTGCGGCACCAAGTCTGGAAAGGGATTTG 999
Query 668 AAGCAAC-TTTCGATGTGCTTGCCAGACTTATTGAAATCAAATTTGCAAGTGGCATCATT 726
| ||||| ||| ||||||||||||||||| ||||||||||||||||||||||| || |||
Sbjct 1000 AGGCAACGTTT-GATGTGCTTGCCAGACTAATTGAAATCAAATTTGCAAGTGGTATTATT 1058
Query 727 GATGAGCTCTTATATCTGGACCACCCACGAGAAAACAGATTTCCCAATGGACTGATGATG 786
|||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 1059 GATGAGCTGTTATATCTGGATCACCCTCGAGAAAACAGATTTCCCAATGGACTGATGATG 1118
Query 787 TTAGAATATAGAAAAGCAGTTCAGGAAACTGTACACGAGCAGTTTCGTGTTGTCCGTGAG 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1119 TTAGAATATAGAAAAGCAGTTCAGGAAACTGTACACGAGCAGTTTCGTGTTGTCCGTGAG 1178
Query 847 GGCCATCTTCGCATCATATTCTCTCAAGATCTGAAGATACTGTCTTGGGAGTTTTGTGCT 906
|||||||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||
Sbjct 1179 GGCCATCTTCGCATCATATTTTCTCAAGATTTGAAGATACTTTCTTGGGAGTTTTGCGCT 1238
Query 907 CGGCGTCATGAAGAGCTTCTTCTTCGCAGACTTATTGCTCCTCAGGTGAACCAGTTGCTT 966
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1239 CGGCGTCATGAAGAGCTTCTTCTTCGCAGACTTATTGCTCCACAGGTGAACCAATTGCTT 1298
Query 967 CAGGTTGCACAGAAATGCCAGAGCACAATTTCAGAGAGTGGTTCAGAGGGAGTTTCTCAG 1026
|||||||||||||||||||||||||| || ||||||||||| |||||||| |||||||||
Sbjct 1299 CAGGTTGCACAGAAATGCCAGAGCACGATCTCAGAGAGTGGGTCAGAGGGGGTTTCTCAG 1358
Query 1027 CAGGATTTGCAGTCAAACAGTAATATGGTCTTGGGAGCAGGACGACAGCTGGCGAAGTTC 1086
|||||||| |||||||| ||||| |||||||||||||||||||| || ||||| ||||||
Sbjct 1359 CAGGATTTACAGTCAAATAGTAACATGGTCTTGGGAGCAGGACGGCAACTGGCAAAGTTC 1418
Query 1087 ATGGAATTACAGTCACTGAATGATCTTGGCTATCCAAAAAGATATATCAGAACTCTACAG 1146
|||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1419 ATGGAACTACAGTCGCTGAATGATCTTGGCTATCCAAAAAGATATATCAGGACTCTGCAG 1478
Query 1147 ATATCTGAAGTTGTCAAGAGCATGAAGGATCTGATGAATTTCACTGGCGAGCACAAAATC 1206
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1479 ATATCTGAAGTTGTCAAGAGCATGAAGGATCTGATGAATTTCACTGGCGAGCAAAAAATC 1538
Query 1207 GGCCCTATCGAGGGTTTAAAACAGCTTCTGGAACAGACAGCGACAGTGAAGCTCCAGAGA 1266
|| ||||| ||||| || |||| |||| |||||||||| | |||||||||||| |||| |
Sbjct 1539 GGTCCTATTGAGGGGTTGAAACGGCTTTTGGAACAGACGGTGACAGTGAAGCTACAGAAA 1598
Query 1267 CAGAAAATGCAAGAGATGGAGCAGTTTGGGC---------C-A-----G--C---T-CAA 1305
|||||||||||||||||||||||||||||| | | | | | |||
Sbjct 1599 CAGAAAATGCAAGAGATGGAGCAGTTTGGGAATAATGGAGCTATAAATGGGCCAGTTCAA 1658
Query 1306 GCTCAAATGGCGTTATCTTCAGGTACGATGAGCGGTTCAACTGCCAACAACAACTCCAAT 1365
|||||||||| |||| ||||||| ||||||| || ||||| | ||| |||| | | |||
Sbjct 1659 GCTCAAATGGTGTTAACTTCAGGAACGATGAATGGCTCAACGGGCAATAACA-C-C-AAT 1715
Query 1366 AATCACCATCAAATTGTTGGTCGTGGAGCTATGAATGG-CTCAGCTCAAG 1414
|||||||||||||||||||||||||||||||||| ||| | ||||| |||
Sbjct 1716 AATCACCATCAAATTGTTGGTCGTGGAGCTATGAGTGGGC-CAGCTGAAG 1764
Score = 1038 bits (562), Expect = 0.0
Identities = 654/700 (93%), Gaps = 0/700 (0%)
Strand=Plus/Plus
Query 1293 TGGGCCAGCTCAAGCTCAAATGGCGTTATCTTCAGGTACGATGAGCGGTTCAACTGCCAA 1352
|||||||||| ||| |||||||| | |||||||||| ||| ||||||| ||||||||||
Sbjct 1751 TGGGCCAGCTGAAGGTCAAATGGTGATATCTTCAGGAACGGTGAGCGGCGCAACTGCCAA 1810
Query 1353 CAACAACTCCAATAATCACCATCAAATTGTTGGTCGTGGAGCTATGAATGGCTCAGCTCA 1412
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 1811 CAACAACTCCAATAATCACAATCAAATTGTTGGTCGTGGAGCTATGAATGGCTCTGCTCA 1870
Query 1413 AGCCGCAGCAGCTTTGACCAACTACCAAAGCATGCTTATGAGGCAAAATGCTATGAATAA 1472
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1871 AGCCGCAGCAGCTCTGACCAACTACCAAAGCATGCTTATGAGGCAAAATGCTATGAATAA 1930
Query 1473 CCCAAACTCAAATACGGGTAAACAAGAGGGGTTCTCGAGTCAGAATCCAACCCCGAACTC 1532
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1931 CCCAAACTCAAATACGGGTAAACAAGAGGGGTTCTCGAGTCAGAACCCAACCCCAAACTC 1990
Query 1533 AAACCAGAGTCCATCTTCTTCGTCAGATCAGAGGCAGAACTTAGCTACAGGTGGATTTCC 1592
||||||||||||||||||||| || | |||||||| ||||||| |||||||||||||||
Sbjct 1991 AAACCAGAGTCCATCTTCTTCATCCCAGCAGAGGCATAACTTAGTTACAGGTGGATTTCC 2050
Query 1593 CAGTTCTCCTCAAATGCAACAGCAGCGGCGCACCATGGATGGCGCTCCCAGCATGCTTCC 1652
|| |||||||||||||||||||||| |||||||||| ||||| || ||| ||| |||||
Sbjct 2051 CAACTCTCCTCAAATGCAACAGCAGCAGCGCACCATGAATGGCCCTACCAACATACTTCC 2110
Query 1653 GCAGAATCATCCTCGTCAGTTGCAATCAGCACAGTCACATGGTAACACTCGGGAGCAGCA 1712
|||||||||||||| |||||| |||||| |||| |||||||||||||||| |||||||||
Sbjct 2111 GCAGAATCATCCTCATCAGTTACAATCACCACATTCACATGGTAACACTCCGGAGCAGCA 2170
Query 1713 GATGCTTCATCAGCTGTTGCAGGAGATGTCTGAAAATGGAGCGAGTGTGCAACAGCAACA 1772
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2171 GATGCTTCATCAGCTGTTGCAGGAGATGTCTGAAAATGGAGGGAGTGTGCAACAGCAACA 2230
Query 1773 AGCCTTTTTGGGTCAAAGTGGTAGCAACAGTAACGCAGAGAGAAACACAACTGCCTCTAC 1832
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2231 AGCCTTTTCGGGTCAAAGTGGTAGCAACAGTAACGCAGAGAGAAACACAACTGCCTCTAC 2290
Query 1833 TTCCAACATCTCAGGAGGAGGCCGAGTTCCAAGCCGCAACAATAGTTTTAAAGCAGCCTC 1892
|||||||||||||||||||||||||| |||||| || ||||| |||||||||||||||||
Sbjct 2291 TTCCAACATCTCAGGAGGAGGCCGAGCTCCAAGTCGAAACAACAGTTTTAAAGCAGCCTC 2350
Query 1893 AAACAACAACCTTCCTTTTTCAGAAGATATATCGGTTTCGGACCATGATTTCTCAGAAGA 1952
||||||||||||| ||||||||||||||||||| | | ||||||||||||||||||||
Sbjct 2351 GAACAACAACCTTCATTTTTCAGAAGATATATCGATCACAGACCATGATTTCTCAGAAGA 2410
Query 1953 TGGCTTCTTCAACATCAGTGATATCTATGGTGGCTTGTAA 1992
|||||||||||||| || ||||||||||||||||||||||
Sbjct 2411 TGGCTTCTTCAACAACAATGATATCTATGGTGGCTTGTAA 2450
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 98694271470
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5