BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg354358 Length=1296 Score E Sequences producing significant alignments: (Bits) Value AT4G24150.1 | Symbols: AtGRF8, GRF8 | growth-regulating factor ... 1301 0.0 > AT4G24150.1 | Symbols: AtGRF8, GRF8 | growth-regulating factor 8 | chr4:12535972-12539387 FORWARD LENGTH=1482 Length=1482 Score = 1301 bits (704), Expect = 0.0 Identities = 786/827 (95%), Gaps = 0/827 (0%) Strand=Plus/Plus Query 469 GTAACAGTGGCAGTGGCAAAAGGAGGCTCATTGCAGCTTGGGATTGCTTCAAGCGCAAGC 528 ||||| ||||||||||| | |||||||||||||||||| ||||||||||||||||||||| Sbjct 655 GTAACTGTGGCAGTGGCGACAGGAGGCTCATTGCAGCTGGGGATTGCTTCAAGCGCAAGC 714 Query 529 AACAACTCGGCTGATCTGGAGCCATGGAGGTGCAAGAGAACAGATGGGAAGAAATGGAGA 588 || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 715 AATAACACGGCTGATCTGGAGCCATGGAGGTGCAAGAGAACAGATGGGAAGAAATGGAGG 774 Query 589 TGCTCTAGAAACGTGATTCCTGATCAGAAATACTGTGAGAGGCACACACACAAGAGCCGT 648 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 775 TGCTCTAGAAACGTGATTCCTGATCAGAAATACTGTGAGAGACACACACACAAGAGCCGT 834 Query 649 CCTCGTTCAAGAAAGCATGTGGAATCATCTCACCAATCGTCTCACCACAATGACATTCCT 708 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | Sbjct 835 CCTCGTTCAAGAAAGCATGTGGAATCATCTCACCAATCATCTCACCACAATGACATTCGT 894 Query 709 ACCACTAAGAACGATACTAGCCAGTTTGCGAGAACTTATCCTCAGTTTTACGGACAACCT 768 || ||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 895 ACGGCTAAGAATGATACTAGCCAGCTTGTGAGAACTTATCCTCAGTTTTACGGACAACCT 954 Query 769 GTAAGCCAGATCCCTGTGCTTTCTACTCTTCCGTCTGCTTCCTCTTCATATGATCACCAC 828 ||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 955 ATAAGCCAGATCCCTGTGCTTTCTACTCTTCCGTCTGCCTCCTCTCCATATGATCACCAC 1014 Query 829 AGAGGATTGAGGTGGTTTAGGAAAGAAGATGATGCCATTGGAACTTTAAACCCGGAGATT 888 |||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||| | Sbjct 1015 AGAGGACTGAGGTGGTTTACGAAAGAAGATGATGCCATTGGAACCTTAAACCCGGAGACT 1074 Query 889 CAAGACGCTGTCCAGCTGAAGGTTGGATCAAACAGAGAGCTCAAACGCGGATTCGATTAT 948 ||||| |||||||||||||| |||||||||| ||||||||||||||| |||||||||||| Sbjct 1075 CAAGAAGCTGTCCAGCTGAAAGTTGGATCAAGCAGAGAGCTCAAACGGGGATTCGATTAT 1134 Query 949 GATCTAAATTTCAGGCAGAAGGAGCCAGTAGTAGACCAGAGCTTTGGAACATTGCAGGGT 1008 ||||| |||||||||||||| |||||| |||||||||||||||||||| ||||||||||| Sbjct 1135 GATCTGAATTTCAGGCAGAAAGAGCCAATAGTAGACCAGAGCTTTGGAGCATTGCAGGGT 1194 Query 1009 CTATTGAGTCTAAACGAGACACCACAACATAACCAAGAGACAAGGCGGTTTGTTGTAGAA 1068 ||||| ||||||||| |||||||||||||||||||||| ||||| | ||||||||||||| Sbjct 1195 CTATTAAGTCTAAACCAGACACCACAACATAACCAAGAAACAAGACAGTTTGTTGTAGAA 1254 Query 1069 GGGAAGCAAGACGAAGCAATGGGAAGCTCTCTGACACTATCAATGGCTGGAGGAGGCATG 1128 || |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct 1255 GGAAAGCAAGATGAAGCGATGGGAAGCTCTCTGACACTCTCAATGGCTGGAGGAGGCATG 1314 Query 1129 GAGGAAGCAGAGGGAACCAACCAGCATCAGTGGGTTAGCCATGAAGGTCCATCATGGCTC 1188 |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1315 GAGGAAACAGAGGGAACAAACCAGCATCAGTGGGTTAGCCATGAAGGTCCATCATGGCTC 1374 Query 1189 TATTCAACAACACCAGGTGGACCATTGGCTGAAGCACTGTGTCTCGGTGTCTCCAACAAC 1248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1375 TATTCAACAACACCAGGTGGACCATTGGCTGAAGCACTGTGTCTCGGTGTCTCCAACAAC 1434 Query 1249 CCAAGTTCTAGTACTACTACTAGTAGCTGCAGCAGAAGCTCAAGCTA 1295 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1435 CCAAGTTCTAGTACTACTACTAGTAGCTGCAGCAGAAGCTCAAGCTA 1481 Score = 667 bits (361), Expect = 0.0 Identities = 425/456 (93%), Gaps = 3/456 (1%) Strand=Plus/Plus Query 15 AGAACGTAAGGAAGATTTTGTTGGTGGGTTTGGATTTGGAGTTGTAGAAAATTCGCATAA 74 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 129 AGAACGCAAGGAAGATTTTGTTGGTGGGTTTGGATTTGGTGTTGTAGAAAATTCGCATAA 188 Query 75 AGACGTTATGGTGCTACCACATCATCATTATCATCCATCATATTCATCACCTTCCTCTTA 134 |||||||||||||||||| |||||||| ||| ||||||||||||||||||||||||| Sbjct 189 AGACGTTATGGTGCTACCTCATCATCACTATTATCCATCATATTCATCACCTTCCTC--- 245 Query 135 TTCTTCTTTGTGCTACTGTTCTGCTGGTGTTAGCGATCCCATGTTCTCTGTTTCTAGCAA 194 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 246 TTCTTCTTTGTGTTACTGTTCTGCTGGTGTTAGCGATCCCATGTTCTCTGTTTCTAGCAA 305 Query 195 TCAGGCATACACTTCTTCTTACAGTAATATGTTTTCTCACACCGGTTCTGGTTCTACTGC 254 |||||| |||||||||||| ||||| |||||| | | | |||||||||||||| |||| Sbjct 306 TCAGGCTTACACTTCTTCTCACAGTGGTATGTTCACACCCGCCGGTTCTGGTTCTGCTGC 365 Query 255 TGTGACTGTAGCAGATCCTTTTTTCTCCTTGAGCTCTTCAGGGGAAATGAGAAGAAGTAT 314 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 TGTGACTGTAGCAGATCCTTTTTTCTCCTTGAGCTCTTCAGGGGAAATGAGAAGAAGTAT 425 Query 315 GAATGAAGACGCAGGTGCAGCTTTCAGTGAAGCTCAATGGCAGGAGCTTGAGAGGCAGAG 374 ||| ||||| || |||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 426 GAACGAAGATGCTGGTGCAGCTTTCAGCGAAGCTCAATGGCATGAGCTTGAGAGGCAGAG 485 Query 375 GAATATATATAAATACATGATGGCTTCTCTTCCTGTTCCTCCCGAGCTTCTCACTCCCTT 434 ||||||||| || ||||||||||||||| ||||||||||||| ||||||||||| ||||| Sbjct 486 GAATATATACAAGTACATGATGGCTTCTGTTCCTGTTCCTCCAGAGCTTCTCACACCCTT 545 Query 435 TCCCAAGAACCACCCATCAAACACTGACCCGGATGT 470 |||||||||||||| |||||||||| |||||||||| Sbjct 546 TCCCAAGAACCACCAATCAAACACTAACCCGGATGT 581 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 63754692150 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5