BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg354433
Length=1212
Score E
Sequences producing significant alignments: (Bits) Value
AT4G23350.1 | Symbols: | Protein of Unknown Function (DUF239) ... 1570 0.0
AT4G23360.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 1489 0.0
AT4G23370.1 | Symbols: | unknown protein; FUNCTIONS IN: molecu... 1417 0.0
> AT4G23350.1 | Symbols: | Protein of Unknown Function (DUF239)
| chr4:12197313-12199200 REVERSE LENGTH=1348
Length=1348
Score = 1570 bits (850), Expect = 0.0
Identities = 1106/1227 (90%), Gaps = 27/1227 (2%)
Strand=Plus/Plus
Query 1 ATGGCTTCCTTCAACCACTTTGTGTTACTGATTCTGTTAACAATCACTCTTATTTTATCC 60
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||
Sbjct 1 ATGGCTTCCTTCAACCACTTTGTGTTACTGCTTCTGTTAATAATCACTCTTATTCTATCC 60
Query 61 GCTGAAGCAACTAAGGAACGCCGAGCAATACCATCAAAGGCAGAGAA-GAAAGAAATGGA 119
|||||||||||||||||||||||||||||||||||||||||||| || ||| |||||| |
Sbjct 61 GCTGAAGCAACTAAGGAACGCCGAGCAATACCATCAAAGGCAGA-AAGGAATGAAATGAA 119
Query 120 GAGACAACTCAAAGCTATCAACAAACCTGCAATCAAGAGTTTCAAGACTAAACATGGTGA 179
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 120 GAGACAACTCAAAGCTATCAACAAGCCTGCAATCAAGAGTTTCAAGACTGAACATGGTGA 179
Query 180 TATATTCGATTGTATCGAAATTCACAAACAACTAGCGTTTGATCATCATCTACTCAAAAA 239
|||||||||||||||||| ||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 180 TATATTCGATTGTATCGATATTCACAAACAACTAGCATTTGATCATCACCTACTAAAAAA 239
Query 240 CCACTCTGTTCAGCTAAAGCCAACAACTGTACCTGAATGGATCACTGGAAACAATGGTTC 299
||||||||||||||||| ||||||||| |||||||||| |||||||||||||| |||
Sbjct 240 CCACTCTGTTCAGCTAAGGCCAACAACAGTACCTGAATATATCACTGGAAACAACATTTC 299
Query 300 GGGGAGTTTTGA-TCTTCTGCAAGAAGGTATAAGCTGTCCAGATGGAACAGTAATTGTAA 358
| ||||||| | |||| |||||||||||||||||||||||||||| |||||||||||||
Sbjct 300 AGAGAGTTTT-AGTCTTTTGCAAGAAGGTATAAGCTGTCCAGATGGCACAGTAATTGTAA 358
Query 359 AAAGGACTACAATGCAAGATCTTATGCATGCACAACGTTTGAAATCCATGGGATTCGACG 418
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 359 AAAGGACTACAATGCAAGATCTTATGCATGCACAACGTTTGAAATCCATGGGATTCGAGG 418
Query 419 GCCCGAGACCTTTTCTCAAAGAGAGCAAT-AACACT-AATTTAAATGGAAAATTCTACTT 476
|||||||||||||||||| ||||| ||| |||| | ||||| |||||||||||||||
Sbjct 419 GCCCGAGACCTTTTCTCACAGAGA-CAAACAACA-TGAATTTTAATGGAAAATTCTACGA 476
Query 477 TGCAACAGCTGACTATGGACCGGATCGTTTTGGTGGAGTAAAAGGAAACATTAACGTATG 536
||||| |||||| ||||||||| | | ||||| |||||| ||||||||||||| ||||
Sbjct 477 TGCAAGAGCTGATTATGGACCGAACCCTTTTGCTGGAGTTGCAGGAAACATTAACATATG 536
Query 537 GAAACCAAATATCTTGCAAGATCAAGTTAGTATCGCATACATAGCAGTTAGTGGAGGGCG 596
||||||||| ||||||||||||||||||||||| | |||||| ||||||||||| ||||
Sbjct 537 GAAACCAAAAATCTTGCAAGATCAAGTTAGTATTGGATACATGGCAGTTAGTGGGGGGCC 596
Query 597 TATTGAAGAAAATTTGGCCAGCATTTCAGTTGGATGGGTGGTGAATCCATCGATGTACTC 656
|||||||||| |||| ||||||||||||||||||||| | ||||||||||||||| || |
Sbjct 597 TATTGAAGAAGATTTCGCCAGCATTTCAGTTGGATGGATTGTGAATCCATCGATGCAC-C 655
Query 657 -TGGTGATCATGTTCGTTTATACGCCTACTGGACTACACATGGAAACA-TGAC---CGGC 711
|||||||||||||||||||||||||||||||||| |||||||| || | || ||||
Sbjct 656 ATGGTGATCATGTTCGTTTATACGCCTACTGGACTTTACATGGAAGCAGT-ACTGGCGGC 714
Query 712 TGCTACGCCATGTCATGTCCTGGATTTGTGCAAGTTAGCAAGACTATACCAGTTAGTGCC 771
||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 715 TGCTACGGCATGTCATGTCCTGGATTTGTGCAAGTTAGCAAGACTATACCAGTTGGTGCC 774
Query 772 ATTCTTCAACCAAGTTCCATCTATAATGGTCCACAATATGAATTGCGTTTGAG-CTTGTA 830
||||||||||| ||||||||||||||||| |||||||||||||||||| || |||||
Sbjct 775 GTTCTTCAACCATTTTCCATCTATAATGGTCGACAATATGAATTGCGTTT-AGGCTTGTT 833
Query 831 TCAGGATCGTGTCAAGGGAGATTGGTGGTTTGCATTTAAAGATGAAAACGTTGGATACTG 890
||||||| ||| || |||| |||||||||||| ||||||||| || | ||||||||||
Sbjct 834 TCAGGATAGTGGCACGGGAAATTGGTGGTTTGTATTTAAAGAGGAGATTATTGGATACTG 893
Query 891 GCCAGCATCATTGTTCAAGTCCTGGAGGGAATCTAACAGCGCAAATCATGCATTTTGGGG 950
|||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||
Sbjct 894 GCCAGCATCATTGTTCAAGTCCTGGATGGAATCTAACAGCGCAAATTATGCATCTTGGGG 953
Query 951 AGGTCAAGTGTATAGCCCTGTGACAGAGAAGACTCCACCTATGGGAAGTGGTCATTGGCC 1010
||| ||||||||||||||| | | |||||||| |||||||||||||||||||||||||||
Sbjct 954 AGGGCAAGTGTATAGCCCTATCAGAGAGAAGAGTCCACCTATGGGAAGTGGTCATTGGCC 1013
Query 1011 TAGTGAGGGCTTCCATAAAGCTGCTTTTATTAGCGGCCTCCAAA-TCATGGATGGTTATG 1069
|||||||||||| |||||||||||||||||||| |||||| ||| || | |||||| | |
Sbjct 1014 TAGTGAGGGCTTTCATAAAGCTGCTTTTATTAGTGGCCTC-AAACTCTTCGATGGTCACG 1072
Query 1070 G-AACAGTTTTTAATCCAGAAT-CGGGTACAGTGAAGGTACATGAGAGCAGACGAAACTG 1127
| || ||||| |||||||| | |||| ||||||||||||||||||||||||| || |||
Sbjct 1073 GGAA-AGTTTATAATCCAGGACGCGGG-ACAGTGAAGGTACATGAGAGCAGACCAATCTG 1130
Query 1128 TTACAAAGCCAGATATGTTCATGAGGTTGCTAAGCCTTGGA-AAAAGTCTGTTTT-TTAT 1185
|||||||||||||||||||||||| |||| ||| |||||| |||| ||||||| || |
Sbjct 1131 TTACAAAGCCAGATATGTTCATGATGTTGATAAACCTTGGTTAAAA-TCTGTTTACTT-T 1188
Query 1186 GGAGGTCCTGGAGGATGCATAGGGTAA 1212
|||||||||||||| ||||||||||||
Sbjct 1189 GGAGGTCCTGGAGGGTGCATAGGGTAA 1215
> AT4G23360.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF239, plant (InterPro:IPR004314);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT4G23370.1); Has 1449 Blast hits to 682 proteins
in 27 species: Archae - 0; Bacteria - 26; Metazoa - 0;
Fungi - 20; Plants - 1403; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr4:12200269-12204792 REVERSE LENGTH=2622
Length=2622
Score = 1489 bits (806), Expect = 0.0
Identities = 1088/1222 (89%), Gaps = 28/1222 (2%)
Strand=Plus/Plus
Query 1 ATGGCTTCCTTCAACCACTTTGTGTTACTGATTCTGTTAACAATCACTCTTATTTTATCC 60
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 1 ATGGCTTCCTTCAACCACTTTGTGTTACTGATTCTGTTAATAATCACTCTTATTCTATCC 60
Query 61 GCTGAAGCAACTAAGGAACGCCGAGCAATACCATCAAAGGCAGAGAAGAAA-GAAATGGA 119
|||||||||||||||||||||||||||||||||||||||||||| ||| || |||||| |
Sbjct 61 GCTGAAGCAACTAAGGAACGCCGAGCAATACCATCAAAGGCAGA-AAGGAATGAAATGAA 119
Query 120 GAGACAACTCAAAGCTATCAACAAACCTGCAATCAAGAGTTTCAAGACTAAACATGGTGA 179
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 120 GAGACAACTCAAAGCTATCAACAAGCCTGCAATCAAGAGTTTCAAGACTGAACATGGTGA 179
Query 180 TATATTCGATTGTATCGAAATTCACAAACAACTAGCGTTTGATCATCATCTACTCAAAAA 239
|||||| ||||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct 180 TATATTTGATTGTATCGATATTCACAAACAACTAGCATTTGATCATCATCTACTAAAAAA 239
Query 240 CCACTCTGTTCAGCTAAAGCCAACAACTGTACCTGAATGGATCACTGGAAACAATGGTTC 299
||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 240 CCACTCTGTTCAGCTAAAGCCAACAACAGTACCTGAATGGATCACTGGAAACAACATTTC 299
Query 300 GGGGAGTTTT-GATCTTCTGCAAGAAGGTATAAGCTGTCCAGATGGAACAGTAATTGTAA 358
||||||||| | |||| ||||||||||||||||||||||| |||| |||||||||||||
Sbjct 300 AGGGAGTTTTAG-TCTTTTGCAAGAAGGTATAAGCTGTCCAAATGGCACAGTAATTGTAA 358
Query 359 AAAGGACTACAATGCAAGATCTTATGCATGCACAACGTTTGAAATCCATGGGATTCGACG 418
|||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |
Sbjct 359 AAAGGACTACAATGGAAGATCTTATGCATGCACAACGTTTGAAATCCATGGGATTTGATG 418
Query 419 GCCCGAGACCTTTTCT--CAAAGAGAGC-AATAACACTAATTTAAATGGAAAATTCTACT 475
|||||||||||||||| |||||| | | || |||||||||| |||||||||||| |||
Sbjct 419 GCCCGAGACCTTTTCTAACAAAGACAACCAACAACACTAATTCAAATGGAAAATTATACG 478
Query 476 TTGCAACAGCTGACTATGGACCGGATCGTTTTGGTGGAGTAAAAGGAAACATTAACGTAT 535
|||||| || | |||||||||| |||| ||||| |||||||| ||||||| |||||||||
Sbjct 479 TTGCAAGAGGTAACTATGGACCAGATCTTTTTGCTGGAGTAAGAGGAAACCTTAACGTAT 538
Query 536 GGAAACCAAATATCTTGCAAGATCAAGTTAGTATCGCATACATAGCAGTTAGTGGAGG-G 594
||| |||||| |||||| |||||||||||||| | ||||||||||||||| ||||||| |
Sbjct 539 GGAGACCAAAAATCTTGGAAGATCAAGTTAGTGTTGCATACATAGCAGTTGGTGGAGGTG 598
Query 595 CGTATTGAAGAAAATTTGGCCAGCATTTCAGTTGGATGGGTGGTGAATCCATCGATGTAC 654
| || |||| ||||| ||||||||||| ||||||||| |||||||||||| | |||
Sbjct 599 C-TA---AAGATAATTTCGCCAGCATTTCTGTTGGATGGAAAGTGAATCCATCGCTATAC 654
Query 655 T-CTGGTGATCATGTTCGTTTATACGCCTACT-GGACTACACATGGAAACA-TGACCGGC 711
| |||||| ||| ||||||||| |||| || ||||| |||||||| || | ||||||
Sbjct 655 CAC-GGTGATTATGCTCGTTTATATGCCT-CTTGGACTTTACATGGAAGCAAT-ACCGGC 711
Query 712 TGCTACGCCATGTCATGTCCTGGATTTGTGCAAGTTAGCAAGACTATACCAGTTAGTGCC 771
||| ||| ||||||||||||||||||||||||||||||||||||||| ||| || |||||
Sbjct 712 TGCAACGACATGTCATGTCCTGGATTTGTGCAAGTTAGCAAGACTATCCCACTTGGTGCC 771
Query 772 ATTCTTCAACCAAGTTCC-ATCTATAATGGTCCACAATATGAATTGCGTTTGAGCTTGTA 830
|| ||||||||| |||| | |||||| |||||||| |||||||||||||||| ||| ||
Sbjct 772 GTTATTCAACCAACTTCCTA-CTATAAGGGTCCACAGTATGAATTGCGTTTGACCTTATA 830
Query 831 TCAGGATCGTGTCAAGGGAGATTGGTGGTTTGCATTTAAAGATGAAAACGTTGGATACTG 890
|||||||| ||||||||||||||||||||||| |||| ||||| |||||||||||||
Sbjct 831 TCAGGATCACATCAAGGGAGATTGGTGGTTTGCAATTAACGATGAGGACGTTGGATACTG 890
Query 891 GCCAGCATCATTGTTCAAGTCCTGGAGGGAATCTAACAGC-GCAAATCATGCATTTTGGG 949
||||||||||||||||||||||||||| ||||||||| || |||| | |||||| |||||
Sbjct 891 GCCAGCATCATTGTTCAAGTCCTGGAGAGAATCTAAC-GCCGCAAGTTATGCATCTTGGG 949
Query 950 GAGGTCAAGTGTATAGCCCTGTGACAGAGAAGACTCCACCTATGGGAAGTGGTCATTGGC 1009
|||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||
Sbjct 950 GAGGTCAAGTGTATAGCCCTGTGACAAAGAAGAGTCCACCTATGGGAAGTGGTCATTGGC 1009
Query 1010 CTAGTGAGGGCTTCCATAAAGCTGCTTTTATTAGCGGCCTCCAAATCATGGATGGTTATG 1069
|||||||||||||||| ||| |||||| | ||||| ||||||||| || |||| |||
Sbjct 1010 CTAGTGAGGGCTTCCAGAAATCTGCTTATGTTAGCCACCTCCAAATGATCCTTGGTGATG 1069
Query 1070 GAACAGTTTTTAATCCAGAATCGGGTACAGTGAAGGTACATGAGAGCAGA-CGAAACTGT 1128
||| ||||||||||||| || |||||||||||||| || | ||| || | | |||||||
Sbjct 1070 GAAGAGTTTTTAATCCACAAACGGGTACAGTGAAGTTATACCAGACCA-ATCAAAACTGT 1128
Query 1129 TACAAAGCCAGAT-ATGTTCATGAGGTTGCTAAGCCTTGGA-AAAAGTCTGTTTTTTATG 1186
||||||||||||| | |||||||||||| |||||||||| |||| ||| ||| |||||
Sbjct 1129 TACAAAGCCAGATTA-GTTCATGAGGTTTATAAGCCTTGGTTAAAA-TCTATTTATTATG 1186
Query 1187 GAGGTCCTGGAGGATGCATAGG 1208
||||||||||||||||||||||
Sbjct 1187 GAGGTCCTGGAGGATGCATAGG 1208
Score = 1463 bits (792), Expect = 0.0
Identities = 1095/1236 (89%), Gaps = 42/1236 (3%)
Strand=Plus/Plus
Query 1 ATGGCTTCCTTCAACCACTTTGTGTTACTGATTCTGTTAACAATCACTCTTATTTTATCC 60
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1405 ATGGCTTCCTTCAACCACTTTGTGTTACTGATTCTGTTAACAGTCACTCTTGTTTTATCC 1464
Query 61 GCTGAAGCAACTAAGGAACGCCGAGCAATACCATCAAAGGCAGAGAAGAAAGAAATGGAG 120
|||||||||||||||||||||||| ||||||||||||||||| | ||||| |||||| ||
Sbjct 1465 GCTGAAGCAACTAAGGAACGCCGACCAATACCATCAAAGGCACAAAAGAATGAAATGAAG 1524
Query 121 AGACAACTCAAAGCTATCAACAAACCTGCAATCAAGAGTTTCAAGACTAAACATGGTGAT 180
||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||
Sbjct 1525 AGACAACTCAAAGCTATCAACAAGCCTGCAATCAAGAGTTTTAAGACTGAACATGGTGAT 1584
Query 181 ATATTCGATTGTATCGAAATTCACAAACAACTAGCGTTTGATCATCATCTACTCAAAAAC 240
||||| ||||||||||| ||||||||||||||||| || |||||||||||||| ||||||
Sbjct 1585 ATATTTGATTGTATCGATATTCACAAACAACTAGCATTGGATCATCATCTACTAAAAAAC 1644
Query 241 CACTCTGTTCAGCTAAAGCCAACAACTGTACCTGAATGGATCACTGGAAACAATGGTTCG 300
|||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||
Sbjct 1645 CACTCTGTTCAGCTAAAGCCAACAACAGTACCTGAATGGATCACTGAAAACAACATTTCA 1704
Query 301 GGGAGTTTTGATCTTCTGCAAGAAGGTATAAGCTGTCCAGATGGAACAGTAATTGTAAAA 360
|||||| || ||||| | ||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1705 GGGAGTATTAATCTTGTACAAGAAGGTATAAGCTGTCCAAATGGAACAGTAATTGTAAAA 1764
Query 361 AGGACTACAATGCAAGATCTTATGCATGCACAACGTTTGAAATCCATGGGATTCGACGGC 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1765 AGGACTACAATGCAAGATCTGATGCATGCACAACGTTTGAAATCCATGGGATTCGACGGC 1824
Query 421 CCGAGACCTTTTCTCAAAGAGAGCAAT-AACACTAATTTAAATGGAAAATTCTACT-TTG 478
|||||||||||||||| ||||| ||| |||||||||| ||||||||||||||| | |||
Sbjct 1825 CCGAGACCTTTTCTCACAGAGA-CAAACAACACTAATTCAAATGGAAAATTCTA-TGTTG 1882
Query 479 CAACAGCTGAC-TATGGACCGGATCGTTTTGGTGGAGTAAAAGGAAACATTAACGTATGG 537
||| || | || | |||||| |||| ||||| |||||||| |||| ||||||| ||||||
Sbjct 1883 CAAAAGGT-ACCTTTGGACCAGATCTTTTTGCTGGAGTAAGAGGACACATTAATGTATGG 1941
Query 538 AAACCAAATATCTTGCAAGATCAAGTTAGTATCGCATACATAGCAGTTAGTGGAGGG-CG 596
||||| |||||||||||||||||||||||| | ||||||||||||||| |||||||| |
Sbjct 1942 AAACCGAATATCTTGCAAGATCAAGTTAGTCTGGCATACATAGCAGTTGGTGGAGGGGC- 2000
Query 597 TATTGAAGAAAATTTGGCCAGCATTTCAGTTGGATGGGTGGTGAATCCATCGATGTACTC 656
|| |||||||||| ||||||||||||||||||||| ||||||||||| ||||||
Sbjct 2001 TA---AAGAAAATTTCGCCAGCATTTCAGTTGGATGGAAAGTGAATCCATCCCTGTACTA 2057
Query 657 TGGTGATCATGTTCGTTTATACGCCTACT-GGACTACACA-T---G-G--A-A--ACA-T 704
|||||||||||||||||||||||||| || ||||| | | | | | | | ||| |
Sbjct 2058 TGGTGATCATGTTCGTTTATACGCCT-CTTGGACTGTA-AGTTTTGAGTTATACCACAAT 2115
Query 705 GACCGGCTGCTACGCCATGTCATGTCCTGGATTTGTGCAAGTTAGCAAGACTATACCAGT 764
||||| ||| ||| |||||||||||||||||||||||||||||||||||||||| || |
Sbjct 2116 -ACCGGGTGCAACGACATGTCATGTCCTGGATTTGTGCAAGTTAGCAAGACTATAGCACT 2174
Query 765 TAGTGCCATTCTTCAACCAAGTTCCATCTATAATGGTCCACAATATGAATTGCGTTTGAG 824
| |||||||| |||||||| |||||||||||| |||||||||||| |||||| |||||
Sbjct 2175 TGGTGCCATTATTCAACCACTTTCCATCTATAAGGGTCCACAATATCAATTGCATTTGAC 2234
Query 825 CTTGTATCAGGATCGTGTCAAGGGAGATTGGTGG-TTTGCATTTAAAGATGAAAACGTTG 883
|||||||||||||| ||||||||||||||||| ||| ||| ||| |||||| ||||||
Sbjct 2235 CTTGTATCAGGATCAAATCAAGGGAGATTGGTGGATTT-CATGTAATGATGAAGACGTTG 2293
Query 884 GATACTGGCCAGCATCATTGTTCAAGTCCTGGAGGGAATCTAACAGC-GCAAATCATGCA 942
|||||||||||||||||||||||||||||||||| ||||||||| || |||| | |||||
Sbjct 2294 GATACTGGCCAGCATCATTGTTCAAGTCCTGGAGAGAATCTAAC-GCCGCAAGTTATGCA 2352
Query 943 TTTTGGGGAGGTCAAGTGTATAGCCCTGTGACAGAGAAGACTCCACCTATGGGAAGTGGT 1002
| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2353 TCTTGGGGAGGTCAAGTGTATAGCCCTGTGACAGAGAAGAGTCCACCTATGGGAAGTGGT 2412
Query 1003 CATTGGCCTAGTGAGGGCTTCCATAAAGCTGCTT-TTATTAG-CGGCCTCCAAATCATGG 1060
||||||||||||||||||| ||| ||| |||||| || |||| | | ||||||| | |
Sbjct 2413 CATTGGCCTAGTGAGGGCTACCAGAAATCTGCTTATT-TTAGACA-CGTCCAAATGA-GC 2469
Query 1061 AT-GGTTATGGAACAGTTTTTAATCCAGAATCGGGTACAGTGAAGGTACATGAGAGCAGA 1119
| ||| |||||| ||||||||||||| || |||||||||||||| || |||||| |||
Sbjct 2470 CTTGGTGATGGAAGAGTTTTTAATCCACAAACGGGTACAGTGAAGTTATATGAGACCAGT 2529
Query 1120 CGAAACTGTTACAAAGCCAGAT-ATGTTCATGAGG-TTGCTAAGCCTTGGA-AAAAGTCT 1176
|||||||||||||||||||||| | |||||||| || |||||||||| |||| |||
Sbjct 2530 CGAAACTGTTACAAAGCCAGATTA-GTTCATGATCATTA-TAAGCCTTGGTTAAAA-TCT 2586
Query 1177 GTTTTTTATGGAGGTCCTGGAGGATGCATAGGGTAA 1212
||| ||||||||||||||||||||||||||||||
Sbjct 2587 ATTTACTATGGAGGTCCTGGAGGATGCATAGGGTAA 2622
> AT4G23370.1 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF239, plant (InterPro:IPR004314);
BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT4G23360.1); Has 2365 Blast hits to 710 proteins
in 27 species: Archae - 0; Bacteria - 35; Metazoa - 0;
Fungi - 30; Plants - 2300; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr4:12206362-12213435 REVERSE LENGTH=3117
Length=3117
Score = 1417 bits (767), Expect = 0.0
Identities = 1058/1193 (89%), Gaps = 42/1193 (4%)
Strand=Plus/Plus
Query 44 TCACTCTTATTTTATCCGCTGAAGCAACTAAGGAACGCCGAGCAATACCATCAAAGGCAG 103
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 1943 TCACTCTTATTTTATCCGCTCAAGCAACTAAGGAACGCCGACCAATACCATCAAAGGCAG 2002
Query 104 AGAAG-AAAGAAATGGAGAGACAACTCAAAGCTATCAACAAACCTGCAATCAAGAGTTTC 162
| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2003 A-AAGAAAAGAAATGGAGAGACAACTCAAAGCTATCAACAAGCCTGCAATCAAGAGTTTG 2061
Query 163 AAGACTAAACATGGTGATATATTCGATTGTATCGAAATTCACAAACAACTAGCGTTTGAT 222
|||||| || |||||||||||||||| |||||||| ||||||||||||| ||| ||||||
Sbjct 2062 AAGACTGAATATGGTGATATATTCGACTGTATCGATATTCACAAACAACGAGCATTTGAT 2121
Query 223 CATCATCTACTCAAAAACCACTCTGTTCAGCTAAAGCCAACAACTGTACCTGAATGGATC 282
|||||||||||||||||||||||| ||||||||||||| |||| ||||||||||||||||
Sbjct 2122 CATCATCTACTCAAAAACCACTCTATTCAGCTAAAGCCTACAAGTGTACCTGAATGGATC 2181
Query 283 ACTGGAAACAATGGTTCGGGGAG-T--TTTGATCTTCTGCAAGAAGGTATAAGCTGTCCA 339
| | ||||| || ||| ||||| | |||| |||||| |||||||||||||||||||||
Sbjct 2182 AATAGAAAC-AT--TTCAGGGAGATCATTTGGTCTTCTACAAGAAGGTATAAGCTGTCCA 2238
Query 340 GATGGAACAGTAATTGTAAAAAGGACTACAATGCAAGATCTTATGCATGCACAACGTTTG 399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2239 GATGGAACAGTAATTGTAAAAAGGACTACAATGCAAGATCTTATGCATGCACAACGTTTG 2298
Query 400 AAATCCATGGGATTCGACGGCCCGAGACCTTTTCTCAAAGAGAGCAAT-AACACTAATTT 458
||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct 2299 AAATCCATGGGATTCGACGGCCCGAGACCTTTTCTCACAGAGA-CAAACAACACTAATTT 2357
Query 459 AAATGGAAAATTCTACTTTGCAACAGCTGACTATGGACCGGATCGTTTTGGTGGAGTAAA 518
||| ||||||||||| |||||| |||| |||||||||| |||| ||||| ||||||||
Sbjct 2358 CAATAGAAAATTCTACGTTGCAAAAGCTAACTATGGACCAGATCTTTTTGCTGGAGTAAG 2417
Query 519 AGGAAACATTAACGTATGGAAACCAAATATCTTGCAAGATCAAGTTAGTATCGCATACAT 578
||||||||||||| ||||| |||||| ||||||||||||||||||||| | ||||||||
Sbjct 2418 AGGAAACATTAACATATGGTCACCAAAAATCTTGCAAGATCAAGTTAGTGTTGCATACAT 2477
Query 579 AGCAGTTAGTGGAGG-GCGTATTGAAGAAAATTTGGCCAGCATTTCAGTTGGATGGGTGG 637
||||||| ||||||| || || |||||||||| ||||||||||||||||||||| |
Sbjct 2478 AGCAGTTGGTGGAGGTGC-TA---AAGAAAATTTTGCCAGCATTTCAGTTGGATGGAAAG 2533
Query 638 TGAATCCATCGATGTACTC-TGGTGATCATGTTCGTTTATACGCCTACT-GGACTACACA 695
|||||||||| | ||| | |||||||||||||||||||||||||| || ||||| | |
Sbjct 2534 TGAATCCATCTCTATAC-CATGGTGATCATGTTCGTTTATACGCCT-CTTGGACTGTA-A 2590
Query 696 -T---G-G--A-A--ACA-TGACCGGCTGCTACGCCATGTCATGTCCTGGATTTGTGCAA 744
| | | | | ||| | ||||||||| ||| |||||||||||||||||||||||||
Sbjct 2591 GTTTTGAGTTATACCACAAT-ACCGGCTGCAACGACATGTCATGTCCTGGATTTGTGCAA 2649
Query 745 GTTAGCAAGACTATACCAGTTAGTGCCATTCTTCAACCAAGTTCCATCTATAATGGTCCA 804
||||||||||||||| || || |||||||| ||||||||| |||||||||||| ||||||
Sbjct 2650 GTTAGCAAGACTATAGCACTTGGTGCCATTATTCAACCAATTTCCATCTATAAGGGTCCA 2709
Query 805 CAATATGAATTGCGTTTGAGCTTGTATCAGGATCGTGTCAAGGGAGATTGGTGGTTTGCA 864
|| |||||||||||||||| |||||||||| ||| |||||||||||||||||||||||
Sbjct 2710 CAGTATGAATTGCGTTTGACCTTGTATCAGAATCAAATCAAGGGAGATTGGTGGTTTGCA 2769
Query 865 TTTAAAGATGAAAACGTTGGATACTGGCCAGCATCATTGTTCAAGTCCTGGAGGGAATCT 924
| ||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2770 TGTAATGATGAGGACGTTGGATACTGGCCAGCATCATTGTTCAAGTCCTGGAGAGAATCT 2829
Query 925 AACAGC-GCAAATCATGCATTTTGGGGAGGTCAAGTGTATAGCCCTGTGACAGAGAAGAC 983
||| || |||| | |||||| |||||| || |||||||||||||| |||||||||||||
Sbjct 2830 AAC-GCCGCAAGTTATGCATCTTGGGGTGGCCAAGTGTATAGCCCAGTGACAGAGAAGAG 2888
Query 984 TCCACCTATGGGAAGTGGTCATTGGCCTAGTGAGGGCTTCCATAAAGCTGCTTTTATTAG 1043
|||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||
Sbjct 2889 TCCACCTATGGGAAGTGGTCATTGGCCTAGTGAGGGCTTCCATAAATCTGCTTATGTTAG 2948
Query 1044 CGGCCTCCAAATCATGGATGGTTA-TGGAACAGTTTTTAATCCAGAATCGGGTACAGTGA 1102
| |||||||||||| ||| ||| ||||| ||||||||||||| || ||||||||||||
Sbjct 2949 CAACCTCCAAATCATTAATG-TTAATGGAAGAGTTTTTAATCCACAAACGGGTACAGTGA 3007
Query 1103 AGGTACATGAGAGCA-GACGAAACTGTTACAAAGCCAGATATGTTCATGAGGTTGCTAAG 1161
|| ||||||||| || | |||| ||||||||||||||||| ||||||||| | | |||
Sbjct 3008 AGTTACATGAGACCATG-CGAAGCTGTTACAAAGCCAGATTTGTTCATGATGCTAAGAAG 3066
Query 1162 CCTTGGA-AAAAGTCTGTTTTT-TATGGAGGTCCTGGAGGATGCATAGGGTAA 1212
|||||| |||| ||| |||| ||||||||||||||||||||||||| ||||
Sbjct 3067 CCTTGGTTAAAA-TCT-TTTTACTATGGAGGTCCTGGAGGATGCATAGTGTAA 3117
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 59537846370
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5