BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg354582 Length=1497 Score E Sequences producing significant alignments: (Bits) Value AT4G21903.2 | Symbols: | MATE efflux family protein | chr4:116... 2134 0.0 AT4G21910.4 | Symbols: | MATE efflux family protein | chr4:116... 1659 0.0 > AT4G21903.2 | Symbols: | MATE efflux family protein | chr4:11620998-11623797 REVERSE LENGTH=1765 Length=1765 Score = 2134 bits (1155), Expect = 0.0 Identities = 1361/1461 (93%), Gaps = 11/1461 (1%) Strand=Plus/Plus Query 1 ATGAA-GGTGTCAAATGAGACGGT-G-GAG-AGAATCGAACTCCGGCAACCGTTGGTGGA 56 ||||| || ||||||||||||||| | ||| |||||||||||||| | |||||||||||| Sbjct 60 ATGAATGG-GTCAAATGAGACGGTGGAGAGAAGAATCGAACTCCGACGACCGTTGGTGGA 118 Query 57 CACGGAGAAGAAACCTCGGTTCGAGGTCGGGCTCGAAAGCGTGTTAACTGATAGTAGCTT 116 |||||||||||||| || ||| || ||||||||||| ||||||||||| || |||||||| Sbjct 119 CACGGAGAAGAAACTTCCGTTAGAAGTCGGGCTCGAGAGCGTGTTAACGGAGAGTAGCTT 178 Query 117 GCCTTACCGGAGGCGCGTGTACTTAGGCGTGTGCATAGAGTTGAAACTACTTTTCCGGTT 176 |||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||| Sbjct 179 GCCTTACCGGAGGCGCGTGTACTTAGGCATGTGCATAGAGTTAAAACTACTTCTCCGGTT 238 Query 177 GGCACTTCCGGCGATACTTGTCTATTTAATCAACGGTGGAATGGGTATTTCCGCTCGTAT 236 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 239 AGCACTTCCGGCTATACTTGTCTATTTAATCAACGGTGGAATGGGTATTTCCGCTCGTAT 298 Query 237 CTTCGCCGGACATCTCGGCAGTAAC-CAACTCGCCGCCGCGTCCATCGGAAACAGCTGCT 295 ||||||||||||||| |||||| || ||||| ||||| || ||||||||||||||| ||| Sbjct 299 CTTCGCCGGACATCTAGGCAGT-ACACAACTAGCCGCGGCATCCATCGGAAACAGCAGCT 357 Query 296 TCAGTCTCGTTTATGCCCTCATGTTGGGCATGGGTAGTGCGGTCGAGACACTATGTGGAC 355 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 358 TCAGCCTCGTTTATGCCCTCATGTTGGGCATGGGTAGTGCGGTCGAGACACTATGTGGAC 417 Query 356 AAGCCTATGGAGCCCATCGATACGAGATGCTTGGGATCTATCTACAAAGAGCAACCATTG 415 |||| ||||| ||||| || ||||||||||||||||||||||| |||||||||||||||| Sbjct 418 AAGCGTATGGTGCCCACCGGTACGAGATGCTTGGGATCTATCTCCAAAGAGCAACCATTG 477 Query 416 TCCTTGCTCTTGTTGGCTTACCTATGACAATACTATACACCTTCTCGTACCCGATTCTTC 475 |||||||||| |||||||| || ||||||||||||||||| || |||||||||||||||| Sbjct 478 TCCTTGCTCTAGTTGGCTTTCCCATGACAATACTATACACTTTTTCGTACCCGATTCTTC 537 Query 476 TCCTCTTAGGCGAGCCCAAAACGGTATCATACATGGGATCTTTATACATCGCCGGACTCA 535 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 538 TCCTCTTAGGCGAGCCTAAAACGGTATCATACATGGGATCTTTATACATCGCCGGACTCA 597 Query 536 TCCCTCAAATCTTTGCTTACGCCGTCTACTTCACGGCCCAAAAGTTCCTCCAGGCCCAAA 595 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 TCCCTCAAATCTTCGCTTACGCCGTCTACTTCACGGCCCAAAAGTTCCTCCAGGCCCAAA 657 Query 596 GCGTGGTGGCTCCC-AGCGCGTACATCTCAGCCGCCGCACTCCTCCTCCAGATATCGCTT 654 |||| ||||| ||| || |||||||||||||||||||| ||| |||||||||||||||| Sbjct 658 GCGTAGTGGC-CCCGAGTGCGTACATCTCAGCCGCCGCCCTCGTCCTCCAGATATCGCTG 716 Query 655 TCGTGGATCACCGTTTATGTAATGGGCTTGGGCCTCATGGGTATAGCTTATGTTCTTACG 714 |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||| Sbjct 717 ACGTGGATCACCGTTTACGCAATGGGCCAAGGCCTCATGGGTATAGCTTATGTTCTTACT 776 Query 715 ATTTCTTGGTGGGTCATTGTTGGAGCCCAAACGTCTTACATTATAGTTAGCGTAAGGTTT 774 || ||||||||| |||| |||||||||||||||| |||| ||||| ||||||||||||| Sbjct 777 ATCTCTTGGTGGTTCATAGTTGGAGCCCAAACGTTTTACGTTATAACTAGCGTAAGGTTT 836 Query 775 AAGGACACTTGGACTGGAGTTAGCTGGAAATC-TCTCCATGGTCTTTGGAGCTTCTTTAA 833 || |||||||||||||| ||||||||||||| | | ||||||||||||||||||||||| Sbjct 837 AAAGACACTTGGACTGGTTTTAGCTGGAAATCGT-TACATGGTCTTTGGAGCTTCTTTAA 895 Query 834 ACTATCTGCTGGCTCTGCTGTAATGATCTGTTTGGAATTGTGGTATACACAGATTCTGGT 893 ||| |||||||||||||| || ||||||||||||||| |||||||||||||||||||||| Sbjct 896 ACTGTCTGCTGGCTCTGCGGTCATGATCTGTTTGGAACTGTGGTATACACAGATTCTGGT 955 Query 894 TCTTCTCGCCGGTTTGCTCAAAGATCCTGCACTCTCTCTAGATTCTCTATCTATATGTAT 953 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| Sbjct 956 TCTTCTCGCTGGTTTGCTTAAAGATCCTGCACTCTCTCTAGATTCTCTATCTATCTGTAT 1015 Query 954 GTCAATTTCAGCATTATCATTCATGGTCTCCGTCGGCTTTAATGCAGCTGTAAGTGTGCG 1013 ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| || Sbjct 1016 GTCAATTTCAGCATTATCATTCATGGTCTCCGTTGGCTTTAATGCTGCTGTAAGTGTACG 1075 Query 1014 TACAAGTAATGAGCTTGGAGCAGGAAATCCGAAATCCGTGTTGTTCTCTACATGGACGGC 1073 |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| || Sbjct 1076 TACAAGTAATGAGCTTGGAGCAGGAAATCCGAAATCGGCGTTATTCTCTACATGGACAGC 1135 Query 1074 GACTTTTGTTTCCTTCGTGATCTCCGTCGTGGAGGCACTTGTCGTGATTGCGTCACGTGA 1133 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1136 GACTTTTGTATCCTTCGTGATCTCCGTCGTAGAGGCACTTGTCGTGATTGCGTCACGTGA 1195 Query 1134 TAACGTCAGCTACATTTTCACGTCAGATGCTGACGTGGCTAAAGCCGTCTCTGATCTCTG 1193 ||||||||||||||||||||||| ||||||||||||||||| ||||||||||| || || Sbjct 1196 CAACGTCAGCTACATTTTCACGTCGGATGCTGACGTGGCTAAGGCCGTCTCTGACCTATG 1255 Query 1194 TCCTTTTCTCGCCGTCACCATTATTCTTAACGGAATCCAACCTGTCTTGTCCGGAGTGGC 1253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1256 TCCTTTTCTCGCCGTCACCATTATTCTTAACGGAATCCAACCTGTCTTGTCCGGAGTGGC 1315 Query 1254 AGTGGGATGTGGATGGCAAACATACGTGGCATATGTGAACGTTGGTTGTTACTATATTGT 1313 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||| || Sbjct 1316 AGTGGGATGTGGATGGCAGACATACGTGGCATATGTGAATATTGGTTGTTACTATATAGT 1375 Query 1314 TGGTATTCCCATTGGATGTATTCTCGGCTTCACTTTCAATTTTCAAGCCAAGGGAATATG 1373 ||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1376 TGGTATTCCAATTGGATGTATTCTCGGCTTCACTTTCAATTTTCAAGCAAAGGGGATATG 1435 Query 1374 GACCGGGATGATTGGAGGTACCCTCATTCAAACACTCATCTTACTTTACGTCACATATCG 1433 |||||||||||||||||| |||||||| |||||||| ||||||||||||||||| |||| Sbjct 1436 GACCGGGATGATTGGAGGCACCCTCATGCAAACACTAATCTTACTTTACGTCACGTATCA 1495 Query 1434 AGCTGATTGGGATAAAGAGGT 1454 ||| ||||||||||||||||| Sbjct 1496 AGCAGATTGGGATAAAGAGGT 1516 > AT4G21910.4 | Symbols: | MATE efflux family protein | chr4:11625443-11629417 REVERSE LENGTH=2013 Length=2013 Score = 1659 bits (898), Expect = 0.0 Identities = 1225/1383 (89%), Gaps = 22/1383 (2%) Strand=Plus/Plus Query 83 TCGGGCTCGAAAGCGTGTTAACTGATAGTAG-CTTGCCTTACCGGAGGCGCGTGTACTTA 141 |||| || || || || ||||| || |||| ||| || ||||||||||||||||||||| Sbjct 262 TCGGACTAGAGAGTGTTTTAACGGAGCGTAGCCTT-CCGTACCGGAGGCGCGTGTACTTA 320 Query 142 GGCGTGTGCATAGAGTTGAAACTACTTTTCCGGTTGGCACTTCCGGCGATACTTGTCTAT 201 || | ||||||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct 321 GGGGCATGCATAGAGATGAAGCTACTTTTCCGGTTGGCACTTCCGGCGATACTTGTCTAT 380 Query 202 TTAATCAACGGTGGAATGGGTATTTCCGCTCGTATCTTCGCCGGACATCTCGGCAGTAAC 261 ||| ||||| | |||||||||||||||||||| |||||||||||||||||||| | || Sbjct 381 TTAGTCAACAGCGGAATGGGTATTTCCGCTCGGATCTTCGCCGGACATCTCGGTAAAAAT 440 Query 262 CAACTCGCCGCCGCGTCCATCGGAAACAGCTGCTTCAGTCTCGTTTATGCCCTCATGTTG 321 | ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| Sbjct 441 GAGCTCGCCGCCGCGTCCATCGGAAACAGCTGCTTCAGTCTCGTCTATGGCCTCATGTTA 500 Query 322 GGCATGGGTAGTGCGGTCGAGACACTATGTGGACAAGCCTATGGAGCCCATCGATACGAG 381 || ||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 501 GGTATGGGCAGTGCAGTCGAAACACTATGTGGACAAGCCTATGGAGCCCATCGTTACGAG 560 Query 382 ATGCTTGGGATCTATCTACAAAGAGCAACCATTGTCCTTGCTCTTGTTGGCTTACCTATG 441 ||||||||||||||||| ||||||||||| || ||||| ||||| |||||||| || ||| Sbjct 561 ATGCTTGGGATCTATCTCCAAAGAGCAACAATAGTCCTCGCTCTAGTTGGCTTGCCCATG 620 Query 442 ACAATACTATACACCTTCTCGTACCCGATTCTTCTCCT-CTTAGGCGAGCCCAAAACGGT 500 ||| |||||||||||||||||||||| ||||| |||| | |||| || ||||||||||| Sbjct 621 ACATTACTATACACCTTCTCGTACCCTATTCTAATCCTAC-TAGGGGAACCCAAAACGGT 679 Query 501 ATCATACATGGGATCTTTATACATCGCCGGACTCATCCCTCAAATCTTTGCTTACGCCGT 560 || ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||| Sbjct 680 GTCGTACATGGGATCCAAATACATCGCCGGGCTCATCCCTCAAATCTTCGCTTACGCCGT 739 Query 561 CTACTTCACGGCCCAAAAGTTCCTCCAGGCCCAAAGCGTGGTGGCTCCC-AGCGCGTACA 619 | |||||||||||||||||||||||||||||||||||||||| || ||| ||||| | || Sbjct 740 CAACTTCACGGCCCAAAAGTTCCTCCAGGCCCAAAGCGTGGTTGC-CCCGAGCGCCTTCA 798 Query 620 TCTCAGCCGCCGCACTCCTCCTCCAGATATCGCTT-TCGTGGATCACCGTTTATGTAATG 678 ||||||||||||| ||| |||||||||||| | || ||||||||||||||||||||||| Sbjct 799 TCTCAGCCGCCGCCCTCATCCTCCAGATATTG-TTGACGTGGATCACCGTTTATGTAATG 857 Query 679 GGCTTGGGCCTCATGGGTATAGCTTATGTTCTTACGATTTCTTGGTGGGTCATTGTTGGA 738 | | ||||| | ||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct 858 GACATGGGCTTTATGGGCATAGCTTATGTTCTTACAATTTCTTGGTGGGTCATTGTTGGA 917 Query 739 GCCCAAACG-TCTTACATTATAGTTAG-CGTAAGGTTTAAG-GACACTTGGACTGGAGTT 795 ||| | | | ||||||| ||||| | || |||| || |||| |||||||| || Sbjct 918 TCCC-AGTGTTTTTACATTGCGGTTAGTCCCAA-GTTT-AGACACACGTGGACTGGTCTT 974 Query 796 AGCTGGAAATCTCTCCATGGTCTTTGGAGCTTCTTTAAACTATCTGCTGGCTCTGCTGTA 855 ||||||| ||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| Sbjct 975 AGCTGGAGATCGCTCCAAGGTCTTTGGAGCTTCTTTAAACTCTCTGCTGGCTCAGCTGTT 1034 Query 856 ATGATCTGTTTGGAATTGTGGTATACACAGATTCTGGTTCTTCTCGCCGGTTTGCTC-AA 914 ||||| ||| ||||| |||||||| | |||||||| |||||||| || ||||||||| || Sbjct 1035 ATGATTTGTCTGGAAATGTGGTATTCGCAGATTCTTGTTCTTCTTGCTGGTTTGCTCGAA 1094 Query 915 AGATCCTGCACTCTCTCTAGATTCTCTATCTATATGTATGTCAATTTCAGCATTATCATT 974 | ||||||| | ||||||||||||||| || || |||||||||||||||||||||||||| Sbjct 1095 A-ATCCTGCTCGCTCTCTAGATTCTCTTTCCATCTGTATGTCAATTTCAGCATTATCATT 1153 Query 975 CATGGTCTCCGTCGGCTTTAATGCAGCTGTAAGTGTGCGTACAAGTAATGAGCTTGGAGC 1034 ||||||||| |||||||||||||| ||||||||||| || |||||||||||||||||||| Sbjct 1154 CATGGTCTCTGTCGGCTTTAATGCTGCTGTAAGTGTACGGACAAGTAATGAGCTTGGAGC 1213 Query 1035 AGGAAATCCGAAATCCGTGTTGTTCTCTACATGGACGGCGACTTTTGTTTCCTTCGTGAT 1094 ||||||||||||||| | | ||||||||||||||||||||||||||| ||||||||||| Sbjct 1214 AGGAAATCCGAAATCAGCATGGTTCTCTACATGGACGGCGACTTTTGTATCCTTCGTGAT 1273 Query 1095 CTCCGTCG-TGGAGGCACTTGTCGTGA-TTGCGTCACGTGATAACGTCAGCTACATTTTC 1152 |||||| | ||| || || | ||||| ||| || |||||| |||| |||||||||||| Sbjct 1274 CTCCGT-GACGGAAGCCCTCGCCGTGATTTG-GTTTCGTGATTACGTTAGCTACATTTTC 1331 Query 1153 ACGTCA-GATGCTGACGTGGCTAAAGCCGTCTCTGATCTCTGTCCTTTTCTCGCCGTCAC 1211 ||| | ||||||||||||||||||||||||||||| |||||||||||||| ||| |||| Sbjct 1332 ACG-GAGGATGCTGACGTGGCTAAAGCCGTCTCTGACCTCTGTCCTTTTCTTGCCATCAC 1390 Query 1212 CATTATTCTTAACGGAATCCAACCTGTCTTGTCCGGAGTGGCAGTGGGATGTGGATGGCA 1271 ||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1391 CATCATTCTCAACGGAATTCAACCTGTCTTGTCCGGAGTGGCAGTGGGATGTGGATGGCA 1450 Query 1272 AACATACGTGGCATATGTGAACGTTGGTTGTTACTATATTGTTGGTATTCCCATTGGATG 1331 ||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| || Sbjct 1451 AACATACGTGGCATATGTGAATGTTGGTTGTTACTACGTTGTTGGTATTCCGGTTGGGTG 1510 Query 1332 TATTCTCGGCTTCACTTTCAATTTTCAAGCCAAGGGAATATGGACCGGGATGATTGGAGG 1391 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1511 TATTCTCGGCTTCACTTTCGATTTTCAAGCCAAGGGAATATGGACCGGGATGATTGGAGG 1570 Query 1392 TACCCTCATTCAAACACTCATCTTACTTTACGTCACATATCGAGCTGATTGGGATAAAGA 1451 ||||||||| ||||||||||| |||||||||||||| || ||| | |||||||||||||| Sbjct 1571 TACCCTCATGCAAACACTCATTTTACTTTACGTCACGTACCGAACAGATTGGGATAAAGA 1630 Query 1452 GGT 1454 ||| Sbjct 1631 GGT 1633 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73845001695 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5