BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg354748 Length=759 Score E Sequences producing significant alignments: (Bits) Value AT2G17785.1 | Symbols: | zinc-binding protein-related | chr2:7... 525 2e-148 > AT2G17785.1 | Symbols: | zinc-binding protein-related | chr2:7728186-7728927 REVERSE LENGTH=579 Length=579 Score = 525 bits (284), Expect = 2e-148 Identities = 471/558 (84%), Gaps = 26/558 (5%) Strand=Plus/Plus Query 1 ATGAGTAAGCCGAGATGGTTTCAAGTATTAACAGAGGAAAACTTAGATGGATACTGCAAA 60 |||||||| |||||||||||||||||||| ||||||||| ||||||||||| ||| | || Sbjct 1 ATGAGTAAACCGAGATGGTTTCAAGTATTGACAGAGGAAGACTTAGATGGAAACTACCAA 60 Query 61 AAGCATAGTTGTGGTTTCCGAAAAAACATCTTCAGGTTCGAGTCATGTGACGTGGTGTGC 120 ||||||| |||||||||||||||||||||||||||||||||||| || ||||| |||||| Sbjct 61 AAGCATACTTGTGGTTTCCGAAAAAACATCTTCAGGTTCGAGTCCTGCGACGTAGTGTGC 120 Query 121 CTTGAAGGCATAGATCC-ATACCATATTCAACCTCATGTTCAAGTGGTCC-CCTTGTTTG 178 | || ||||||||||| | |||||||||||||||||||||||||| | | || || ||| Sbjct 121 CCCGAGGGCATAGATCCCA-ACCATATTCAACCTCATGTTCAAGTG-TGCACCATGCTTG 178 Query 179 ATGTTAACGGCCTT-GA-CATGGACGAAATCTCTGATATCTTTGATTGTTTCCAAATTCA 236 || |||||| |||| || | || || ||||||||||| |||||||||||| ||||||||| Sbjct 179 ATCTTAACG-CCTTTGAAC-TGAACCAAATCTCTGATCTCTTTGATTGTTCCCAAATTCA 236 Query 237 AAATAAAGGTCT-CATTGGAGGGAAGGGGCTGATAGCGTTGAGGCCATGGCGAAGA-TGT 294 |||| | ||| | | ||||||||||| | | ||| ||||||||||||| || || ||| Sbjct 237 AAATCATGGT-TACGTTGGAGGGAAGCAGTTTATAATGTTGAGGCCATGGAGA-GACTGT 294 Query 295 ATAAGAACTAAAGAAGGTTGCACTAAGCATGTCCGTGGGACG--T-CCAAGTTCTGCTCG 351 |||||| || ||||||||||||||| ||||||| |||| | ||||||||||| | Sbjct 295 GTAAGAAATACAGAAGGTTGCACTAAACATGTCCAAGGGATTAATTCCAAGTTCTGCACT 354 Query 352 TTCACATGCAAGGTGGAACATGTTTTGGAGAATGAAGGTGATTTGTCTAGCATCA-TCAG 410 ||||| |||||| | ||||||||||||||| |||||||||||||||| ||||| | | || Sbjct 355 TTCACCTGCAAGATCGAACATGTTTTGGAGCATGAAGGTGATTTGTCCAGCATTACT-AG 413 Query 411 AAATTGGTCA--G-AGGATGATTCAAGAGAAAC-GTCCGAACATATTGATGATCTATCAC 466 | |||||| | |||||||||| |||||| | ||| ||||| ||| |||| || || Sbjct 414 ACTTTGGTCGTCGGAGGATGATTCGAGAGAA-CTGTCAGAACACGTTGGTGATTTAGCAA 472 Query 467 TCCATCCTTGTGGTGATCCAGAGA-AAGTCTTTCCATTCAAA-AAGAGGTCTCGAAGACG 524 |||||||||||||||||||||||| || |||||||||| ||| ||||||||||||||| | Sbjct 473 TCCATCCTTGTGGTGATCCAGAGAGAA-TCTTTCCATT-AAAGAAGAGGTCTCGAAGAAG 530 Query 525 AATAGAGTTTTATGACAG 542 || |||||||| |||||| Sbjct 531 AAGAGAGTTTTTTGACAG 548 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36871863898 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5