BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg355465 Length=627 Score E Sequences producing significant alignments: (Bits) Value AT4G13540.1 | Symbols: | unknown protein; INVOLVED IN: N-termi... 843 0.0 > AT4G13540.1 | Symbols: | unknown protein; INVOLVED IN: N-terminal protein myristoylation; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G23930.1); Has 4658 Blast hits to 3455 proteins in 431 species: Archae - 39; Bacteria - 387; Metazoa - 1842; Fungi - 436; Plants - 133; Viruses - 38; Other Eukaryotes - 1783 (source: NCBI BLink). | chr4:7869874-7870750 FORWARD LENGTH=801 Length=801 Score = 843 bits (456), Expect = 0.0 Identities = 581/639 (91%), Gaps = 18/639 (3%) Strand=Plus/Plus Query 1 ATGGGTGGCTCTACAAGCAAGCAGGAGAGAAACAGTAGTAAGAGACGCATCAAGGTGAAA 60 |||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct 23 ATGGGTGGTTCTACAAGCAAGGATGAGAGAAACAGTAGTAAGAGACGCATCAAGGTGAAA 82 Query 61 TCAAATGAACAACagagaaggagagaaacaagaagagagcttgatgagaaagagagagTG 120 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 83 GCAAATG---AACAGAGAAGGAGAGAAACAAGAAGAGAGCTTGATGAGAAAGAGAGAGTG 139 Query 121 ATTTTGGC-TCTGAAGATGGCagagacagagtggaggaaagagaggaagagactgagaga 179 |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 140 ATTTTGGCGT-TGAAGATGGCAGAGACAGAGTGGAGGAAAGAGAGGAAGAGACTGAGAGA 198 Query 180 ggaggtggagagactgagacagaagatggaagagaaagaaga-ggCAAAAGTGAAACAAC 238 ||| ||| |||| ||||||||||||||||||||||| ||||| || ||| | |||||||| Sbjct 199 GGAAGTGAAGAGGCTGAGACAGAAGATGGAAGAGAAGGAAGAAGG-AAAGGCGAAACAAC 257 Query 239 ACGAGTGGGAATGGGTTGTGGAACAGATGTGCTTAGAGAGAGCGGTGAGGGAAGAAGCCG 298 |||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| | Sbjct 258 ACGAGTGGGAATGGGTCGTGGAACAGATGTGTTTAGAGAGAGCAGTGAGGGAAGAAGCTG 317 Query 299 TGGAGAGGTGGAAACAACTCTATTTTGCTATCAAGAATGAGCTTGATGATCTCATCCACA 358 ||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| Sbjct 318 TGGAGAGGTGGAAGCAGCTCTACTTTGCTATCAAGAATGAGCTTGATGATCTCATCCACA 377 Query 359 CAACATATGGAGAGGCATTGAGACAGAAACCTCAAGAAGAAAT---A--G----TGCAAG 409 ||||||||||||||||| ||||||||||||| ||||||||| | | | |||||| Sbjct 378 CAACATATGGAGAGGCACTGAGACAGAAACCGCAAGAAGAAGTTGCAAAGGCAGTGCAAG 437 Query 410 AACTGAGGAAGGAAGTTAAAGTTAGGGGAGAAACTATTGAGACACTCAA-GGGAAGAATA 468 |||| || ||||||||||||| |||||||||||| ||||||||||| || |||| ||||| Sbjct 438 AACTCAGAAAGGAAGTTAAAGCTAGGGGAGAAACCATTGAGACACTGAAAGGGA-GAATA 496 Query 469 GCTTTGATGGAGAAACAACGAAATGAGAAGGAAAGAGAGATTGATTTACTGAGGCAGAGT 528 ||||||||||||||||| ||||| |||||||||||||||||| |||||||| |||||| Sbjct 497 AATTTGATGGAGAAACAACAAAATGGGAAGGAAAGAGAGATTGACTTACTGAGACAGAGT 556 Query 529 CTGCGTATCCTCGGCGGTATCAGCGGGAGGAACAAAGCACCGTCATCTACTACCAGAAGC 588 ||||||||||||||||||| |||||||| |||||| |||| |||||||||||||||| | Sbjct 557 CTGCGTATCCTCGGCGGTAGCAGCGGGAAGAACAAGGCACTATCATCTACTACCAGAAAC 616 Query 589 CTGCCAGTATTCAAAACAAAATTCATTGGGCGTAAATAA 627 ||| |||||||||||||||||||||| ||| |||||||| Sbjct 617 CTGACAGTATTCAAAACAAAATTCATCGGGTGTAAATAA 655 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30240956494 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5