BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg355644

Length=987
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G55210.1 | Symbols: anac063, NAC063 | NAC domain containing ...   440    1e-122
  AT5G39690.1 | Symbols: ANAC093, NAC093 | NAC domain containing ...   348    7e-95 


> AT3G55210.1 | Symbols: anac063, NAC063 | NAC domain containing 
protein 63 | chr3:20465215-20466240 FORWARD LENGTH=843
Length=843

 Score =  440 bits (238),  Expect = 1e-122
 Identities = 349/401 (87%), Gaps = 14/401 (3%)
 Strand=Plus/Plus

Query  21   ATTCGAAAAGGGTAATGAGAAAGAATGGTTCATTATATCGGAGAGGAACAAAGTTGATCA  80
            |||| | |||||||| || ||||||||||| |||||| ||||||||||||||||||||||
Sbjct  183  ATTCCAGAAGGGTAACGATAAAGAATGGTTTATTATAACGGAGAGGAACAAAGTTGATCA  242

Query  81   AGGTTTAAGCAAGAA-AAAGAGAGTTGGTAATGGTGCGACAAAG-CAGAAACGTGGCGAC  138
            |||||||||| | || ||||||||||||| ||||||||| |||| |||||||||| ||||
Sbjct  243  AGGTTTAAGCCA-AACAAAGAGAGTTGGTTATGGTGCGA-AAAGGCAGAAACGTGTCGAC  300

Query  139  ACTAAAGGAGGATATTGGCACGCGACAGGGGCTGCCCAAGAGATCAACACTGGAGAAGGT  198
            ||||| ||||||||||||||||| |||| |||||||||| |||||||| ||||||| |||
Sbjct  301  ACTAACGGAGGATATTGGCACGCAACAGTGGCTGCCCAAAAGATCAACGCTGGAGATGGT  360

Query  199  GTCGTTGGCTACAAAACGGC-ACTTGCATACTTCGTTAGGACACGGTCAGGCAG-CGTCA  256
            |||||| || |||||| ||| ||| ||||||| |||| ||| ||  ||||  || |||||
Sbjct  361  GTCGTTCGCAACAAAA-GGCCACTGGCATACTACGTTGGGAAACCATCAGA-AGGCGTCA  418

Query  257  AAACGGATTGGTTAATG-ATTGAATACTCG-TTGCATCACACTTGTCACAACAACGACAA  314
            |||| |||||||||||| |  ||||||||  ||| ||||| ||| |||||||||||||||
Sbjct  419  AAACTGATTGGTTAATGCAA-GAATACTCTCTTG-ATCACTCTTCTCACAACAACGACAA  476

Query  315  GGATTATACTTTGTGCAAGATCTATATGACTCCACAAGCTATaaagaagaca-aaagaag  373
            |||||| |||||||||||||||||| | ||||||||||| | ||||| || | |||||||
Sbjct  477  GGATTACACTTTGTGCAAGATCTATCTTACTCCACAAGCAACAAAGATGA-ATAAAGAAG  535

Query  374  tggaagaagagaataagaagcagaagaaaggagaagGCGTT  414
            ||| ||||||||| |||||||||||||||||||||| ||||
Sbjct  536  TGGGAGAAGAGAAGAAGAAGCAGAAGAAAGGAGAAGCCGTT  576


> AT5G39690.1 | Symbols: ANAC093, NAC093 | NAC domain containing 
protein 93 | chr5:15888171-15890187 FORWARD LENGTH=885
Length=885

 Score =  348 bits (188),  Expect = 7e-95
 Identities = 332/396 (84%), Gaps = 31/396 (8%)
 Strand=Plus/Plus

Query  21   ATTCGAAAAGGGTAATGAGAAAGAATGGTTCATTATATCGGAGAGGAACAAAGTTGATCA  80
            |||||| |||||||| || ||||||||||| |||||| ||||||||||||||||||||||
Sbjct  117  ATTCGAGAAGGGTAACGATAAAGAATGGTTTATTATAACGGAGAGGAACAAAGTTGATCA  176

Query  81   AGGTTTAAGCAAGAA-AAAGAGAGTTGGTAATGGTGCGACAAAG-CAGAAACGTGGCGAC  138
            |||||||||| | || ||||||||||||||||||||||| |||| ||||||||||  |||
Sbjct  177  AGGTTTAAGCCA-AACAAAGAGAGTTGGTAATGGTGCGA-AAAGGCAGAAACGTGTTGAC  234

Query  139  ACTAAAGGAGGATATTGGCACGCGACAGGGGCTGCCCAAGAGATCAACACTGGAGAAGGT  198
            ||||| ||||||||||||||||| |||| |||||||||| |||||||| ||||||| |||
Sbjct  235  ACTAACGGAGGATATTGGCACGCAACAGTGGCTGCCCAAAAGATCAACGCTGGAGATGGT  294

Query  199  GTCGTTGGCTACAAAACGGC-ACTTGCATACTTCGTTAGGACACGGTCAGGCAG-CGTCA  256
            ||||||||| |||||| ||| ||||||||||| || ||||| ||  ||||  || |||||
Sbjct  295  GTCGTTGGCAACAAAA-GGCCACTTGCATACTACGATAGGAAACCATCAGA-AGACGTCA  352

Query  257  AAACGGATTGGTTAATG-ATTGAATACTCG-TTGCATCACACTTGTCA-CAACAACGACA  313
            |||| |||||||||||| |  ||||||||  ||| ||||||     || | |||| |  |
Sbjct  353  AAACTGATTGGTTAATGCAA-GAATACTCTCTTG-ATCACAA----CAACGACAAGGT-A  405

Query  314  AGGATTATACTTTGTGCAAGATCTATATGACTCCACAAGCTATaaagaagacaaaagaag  373
            || |||| |||||||||||||| ||| | ||||||||||| | |       |||| ||||
Sbjct  406  AG-ATTACACTTTGTGCAAGATTTATCTTACTCCACAAGC-A-A-------CAAA-GAAG  454

Query  374  t-ggaagaagagaataagaagcagaagaaaggagaa  408
            | ||| |||||||| |||||||||||||||||||||
Sbjct  455  TTGGA-GAAGAGAAGAAGAAGCAGAAGAAAGGAGAA  489



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 48325249414


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5